RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 FNBP4Q8N3X1 1017 aaPredicted RBP32.72■■■□□ 2.83
LIMK2-206ENST00000462625 CABP1Q9NZU7 370 aa32.72■■■□□ 2.83
LIMK2-206ENST00000462625 USP21Q9UK80 565 aa32.72■■■□□ 2.83
LIMK2-206ENST00000462625 QTRT2Q9H974 415 aaKnown RBP32.71■■■□□ 2.83
LIMK2-206ENST00000462625 ATAD2Q6PL18 1390 aa32.7■■■□□ 2.82
LIMK2-206ENST00000462625 SLC24A1O60721 1099 aa32.69■■■□□ 2.82
LIMK2-206ENST00000462625 BRD4O60885 1362 aaPredicted RBP32.67■■■□□ 2.82
LIMK2-206ENST00000462625 TRPC5Q9UL62 973 aaPredicted RBP32.65■■■□□ 2.82
LIMK2-206ENST00000462625 ST20-MTHFSA0A0A6YYL1 179 aa32.64■■■□□ 2.82
LIMK2-206ENST00000462625 RBM6P78332 1123 aaKnown RBP32.63■■■□□ 2.81
LIMK2-206ENST00000462625 ZNF692Q9BU19 519 aaPredicted RBP32.63■■■□□ 2.81
LIMK2-206ENST00000462625 ABTB2Q8N961 1025 aa32.62■■■□□ 2.81
LIMK2-206ENST00000462625 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.6■■■□□ 2.81
LIMK2-206ENST00000462625 CRYBG1Q9Y4K1 1723 aa32.6■■■□□ 2.81
LIMK2-206ENST00000462625 AKAP12Q02952 1782 aa32.6■■■□□ 2.81
LIMK2-206ENST00000462625 USP6P35125 1406 aa32.6■■■□□ 2.81
LIMK2-206ENST00000462625 USP47Q96K76 1375 aa32.59■■■□□ 2.81
LIMK2-206ENST00000462625 CDK12Q9NYV4 1490 aaPredicted RBP32.59■■■□□ 2.81
LIMK2-206ENST00000462625 SLIT2O94813 1529 aa32.58■■■□□ 2.81
LIMK2-206ENST00000462625 NWD2Q9ULI1 1742 aa32.58■■■□□ 2.81
LIMK2-206ENST00000462625 PUS7Q96PZ0 661 aaKnown RBP32.58■■■□□ 2.81
LIMK2-206ENST00000462625 BCL9LQ86UU0 1499 aa32.58■■■□□ 2.81
LIMK2-206ENST00000462625 PLCH1Q4KWH8 1693 aa32.57■■■□□ 2.8
LIMK2-206ENST00000462625 NUTM2GQ5VZR2 741 aa32.57■■■□□ 2.8
LIMK2-206ENST00000462625 UNC5CLQ8IV45 518 aa32.57■■■□□ 2.8
LIMK2-206ENST00000462625 NLRP13Q86W25 1043 aa32.56■■■□□ 2.8
LIMK2-206ENST00000462625 ATRNO75882 1429 aa32.56■■■□□ 2.8
LIMK2-206ENST00000462625 PHRF1Q9P1Y6 1649 aaKnown RBP32.55■■■□□ 2.8
LIMK2-206ENST00000462625 TESK2Q96S53 571 aa32.55■■■□□ 2.8
LIMK2-206ENST00000462625 TMC1Q8TDI8 760 aa32.54■■■□□ 2.8
LIMK2-206ENST00000462625 COL14A1Q05707 1796 aaKnown RBP32.54■■■□□ 2.8
LIMK2-206ENST00000462625 FAM83GA6ND36 823 aa32.53■■■□□ 2.8
LIMK2-206ENST00000462625 KTN1Q86UP2 1357 aaKnown RBP32.5■■■□□ 2.79
LIMK2-206ENST00000462625 TMF1P82094 1093 aa32.5■■■□□ 2.79
LIMK2-206ENST00000462625 CPSF1Q10570 1443 aaKnown RBP32.5■■■□□ 2.79
LIMK2-206ENST00000462625 PRDM11Q9NQV5 511 aa32.49■■■□□ 2.79
LIMK2-206ENST00000462625 HDGFL2Q7Z4V5 671 aaPredicted RBP32.48■■■□□ 2.79
LIMK2-206ENST00000462625 GJD4Q96KN9 370 aaPredicted RBP32.48■■■□□ 2.79
LIMK2-206ENST00000462625 SSH2Q76I76 1423 aa32.48■■■□□ 2.79
LIMK2-206ENST00000462625 MON2Q7Z3U7 1717 aa32.48■■■□□ 2.79
LIMK2-206ENST00000462625 NLRP6P59044 892 aa32.47■■■□□ 2.79
LIMK2-206ENST00000462625 TTC21AQ8NDW8 1320 aa32.47■■■□□ 2.79
LIMK2-206ENST00000462625 TERF2IPQ9NYB0 399 aa32.46■■■□□ 2.79
LIMK2-206ENST00000462625 USP19O94966 1318 aa32.46■■■□□ 2.79
LIMK2-206ENST00000462625 TTC21BQ7Z4L5 1316 aa32.46■■■□□ 2.79
LIMK2-206ENST00000462625 ZC3H6P61129 1189 aaKnown RBP32.45■■■□□ 2.79
LIMK2-206ENST00000462625 SLC12A5Q9H2X9 1139 aa32.45■■■□□ 2.79
LIMK2-206ENST00000462625 BTG4Q9NY30 223 aa32.45■■■□□ 2.79
LIMK2-206ENST00000462625 NINLQ9Y2I6 1382 aa32.45■■■□□ 2.78
LIMK2-206ENST00000462625 CDCA8Q53HL2 280 aa32.44■■■□□ 2.78
LIMK2-206ENST00000462625 KIAA0232Q92628 1395 aa32.44■■■□□ 2.78
LIMK2-206ENST00000462625 PIK3C2AO00443 1686 aa32.43■■■□□ 2.78
LIMK2-206ENST00000462625 RGS12O14924 1447 aa32.43■■■□□ 2.78
LIMK2-206ENST00000462625 VPS72Q15906 364 aa32.43■■■□□ 2.78
LIMK2-206ENST00000462625 CCDC9Q9Y3X0 531 aaKnown RBP32.43■■■□□ 2.78
LIMK2-206ENST00000462625 NRKQ7Z2Y5 1582 aa32.43■■■□□ 2.78
LIMK2-206ENST00000462625 GCP02774 474 aa32.42■■■□□ 2.78
LIMK2-206ENST00000462625 NRAPQ86VF7 1730 aa32.42■■■□□ 2.78
LIMK2-206ENST00000462625 CD163L1Q9NR16 1453 aa32.39■■■□□ 2.78
LIMK2-206ENST00000462625 CPDO75976 1380 aa32.37■■■□□ 2.77
LIMK2-206ENST00000462625 CHRNA2Q15822 529 aa32.37■■■□□ 2.77
LIMK2-206ENST00000462625 GLI3P10071 1580 aa32.36■■■□□ 2.77
LIMK2-206ENST00000462625 SLIT3O75094 1523 aa32.36■■■□□ 2.77
LIMK2-206ENST00000462625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.35■■■□□ 2.77
LIMK2-206ENST00000462625 KCNH5Q8NCM2 988 aa32.35■■■□□ 2.77
LIMK2-206ENST00000462625 EDC4Q6P2E9 1401 aaKnown RBP32.34■■■□□ 2.77
LIMK2-206ENST00000462625 A0A1W2PP64 1363 aa32.34■■■□□ 2.77
LIMK2-206ENST00000462625 EIF4G2P78344 907 aaKnown RBP eCLIP32.34■■■□□ 2.77
LIMK2-206ENST00000462625 EVA1CP58658 441 aa32.32■■■□□ 2.76
LIMK2-206ENST00000462625 ZBTB7CA1YPR0 619 aa32.29■■■□□ 2.76
LIMK2-206ENST00000462625 STRN4Q9NRL3 753 aa32.28■■■□□ 2.76
LIMK2-206ENST00000462625 USP31Q70CQ4 1352 aa32.27■■■□□ 2.76
LIMK2-206ENST00000462625 ANKRD36BQ8N2N9 1353 aa32.27■■■□□ 2.76
LIMK2-206ENST00000462625 USP54Q70EL1 1684 aa32.27■■■□□ 2.76
LIMK2-206ENST00000462625 LMO7Q8WWI1 1683 aa32.26■■■□□ 2.75
LIMK2-206ENST00000462625 SPATA31A5Q5VU36 1347 aa32.26■■■□□ 2.75
LIMK2-206ENST00000462625 SPATA31A7Q8IWB4 1347 aa32.26■■■□□ 2.75
LIMK2-206ENST00000462625 NME9Q86XW9 330 aa32.25■■■□□ 2.75
LIMK2-206ENST00000462625 CAMTA1Q9Y6Y1 1673 aa32.24■■■□□ 2.75
LIMK2-206ENST00000462625 SOX12O15370 315 aa32.24■■■□□ 2.75
LIMK2-206ENST00000462625 ONECUT3O60422 494 aaPredicted RBP32.24■■■□□ 2.75
LIMK2-206ENST00000462625 HSPA5P11021 654 aaKnown RBP32.24■■■□□ 2.75
LIMK2-206ENST00000462625 BRWD3Q6RI45 1802 aa32.23■■■□□ 2.75
LIMK2-206ENST00000462625 AATKQ6ZMQ8 1374 aa32.23■■■□□ 2.75
LIMK2-206ENST00000462625 A0A0G2JS52 829 aa32.23■■■□□ 2.75
LIMK2-206ENST00000462625 MYT1Q01538 1121 aa32.23■■■□□ 2.75
LIMK2-206ENST00000462625 SEPT12Q8IYM1 358 aa32.23■■■□□ 2.75
LIMK2-206ENST00000462625 UPF1Q92900 1129 aaKnown RBP eCLIP32.22■■■□□ 2.75
LIMK2-206ENST00000462625 FAM98CQ17RN3 349 aaKnown RBP32.21■■■□□ 2.75
LIMK2-206ENST00000462625 ZRANB1Q9UGI0 708 aa32.21■■■□□ 2.75
LIMK2-206ENST00000462625 ARHGEF25Q86VW2 580 aa32.19■■■□□ 2.74
LIMK2-206ENST00000462625 SPATA31A1Q5TZJ5 1347 aa32.19■■■□□ 2.74
LIMK2-206ENST00000462625 COL18A1P39060 1754 aa32.17■■■□□ 2.74
LIMK2-206ENST00000462625 NFAT5O94916 1531 aa32.17■■■□□ 2.74
LIMK2-206ENST00000462625 MYOM1P52179 1685 aa32.17■■■□□ 2.74
LIMK2-206ENST00000462625 COL5A2P05997 1499 aaPredicted RBP32.16■■■□□ 2.74
LIMK2-206ENST00000462625 RGPD5Q99666 1765 aa32.15■■■□□ 2.74
LIMK2-206ENST00000462625 LARP1Q6PKG0 1096 aaKnown RBP32.15■■■□□ 2.74
LIMK2-206ENST00000462625 COG3Q96JB2 828 aa32.15■■■□□ 2.74
LIMK2-206ENST00000462625 POLR3GLQ9BT43 218 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms