RNA–Protein interactions for RNA: ENST00000462353.1

RAB3GAP2-203, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 1 (best)

Gene RAB3GAP2, Length 1,906 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-203ENST00000462353 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
RAB3GAP2-203ENST00000462353 PXDNQ92626 1479 aa13.07□□□□□ -0.32
RAB3GAP2-203ENST00000462353 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
RAB3GAP2-203ENST00000462353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.06□□□□□ -0.32
RAB3GAP2-203ENST00000462353 KIF20BQ96Q89 1820 aa13.06□□□□□ -0.32
RAB3GAP2-203ENST00000462353 TERF2IPQ9NYB0 399 aa13.05□□□□□ -0.32
RAB3GAP2-203ENST00000462353 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
RAB3GAP2-203ENST00000462353 UBAP1LF5GYI3 381 aa13.05□□□□□ -0.32
RAB3GAP2-203ENST00000462353 PIP4K2BP78356 416 aa13.05□□□□□ -0.32
RAB3GAP2-203ENST00000462353 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
RAB3GAP2-203ENST00000462353 CC2D1BQ5T0F9 858 aaKnown RBP13.04□□□□□ -0.32
RAB3GAP2-203ENST00000462353 NME9Q86XW9 330 aa13.04□□□□□ -0.32
RAB3GAP2-203ENST00000462353 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
RAB3GAP2-203ENST00000462353 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
RAB3GAP2-203ENST00000462353 FYB1O15117 783 aa13.03□□□□□ -0.32
RAB3GAP2-203ENST00000462353 YTHDC1Q96MU7 727 aaKnown RBP13.03□□□□□ -0.32
RAB3GAP2-203ENST00000462353 ANKRD26Q9UPS8 1709 aa13.02□□□□□ -0.32
RAB3GAP2-203ENST00000462353 GGNBP2Q9H3C7 697 aa13.02□□□□□ -0.32
RAB3GAP2-203ENST00000462353 KNSTRNQ9Y448 316 aa13.02□□□□□ -0.32
RAB3GAP2-203ENST00000462353 PSME1Q06323 249 aa13.01□□□□□ -0.33
RAB3GAP2-203ENST00000462353 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
RAB3GAP2-203ENST00000462353 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
RAB3GAP2-203ENST00000462353 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
RAB3GAP2-203ENST00000462353 AHDC1Q5TGY3 1603 aaPredicted RBP13.01□□□□□ -0.33
RAB3GAP2-203ENST00000462353 TOM1O60784 492 aa13.01□□□□□ -0.33
RAB3GAP2-203ENST00000462353 FBLN1P23142 703 aa13.01□□□□□ -0.33
RAB3GAP2-203ENST00000462353 SCAF1Q9H7N4 1312 aaKnown RBP13.01□□□□□ -0.33
RAB3GAP2-203ENST00000462353 COL16A1Q07092 1604 aaPredicted RBP13□□□□□ -0.33
RAB3GAP2-203ENST00000462353 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
RAB3GAP2-203ENST00000462353 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
RAB3GAP2-203ENST00000462353 OVOS2A0A0J9YW53 1432 aa13□□□□□ -0.33
RAB3GAP2-203ENST00000462353 OVOS2Q6IE36 1432 aa13□□□□□ -0.33
RAB3GAP2-203ENST00000462353 SOS2Q07890 1332 aaPredicted RBP13□□□□□ -0.33
RAB3GAP2-203ENST00000462353 PHLPP1O60346 1717 aa12.99□□□□□ -0.33
RAB3GAP2-203ENST00000462353 CGNL1Q0VF96 1302 aa12.99□□□□□ -0.33
RAB3GAP2-203ENST00000462353 PARD3Q8TEW0 1356 aa12.98□□□□□ -0.33
RAB3GAP2-203ENST00000462353 CRYBG1Q9Y4K1 1723 aa12.98□□□□□ -0.33
RAB3GAP2-203ENST00000462353 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
RAB3GAP2-203ENST00000462353 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
RAB3GAP2-203ENST00000462353 PRKRIP1Q9H875 184 aaPredicted RBP12.98□□□□□ -0.33
RAB3GAP2-203ENST00000462353 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
RAB3GAP2-203ENST00000462353 TNS3Q68CZ2 1445 aa12.97□□□□□ -0.33
RAB3GAP2-203ENST00000462353 NPC1L1Q9UHC9 1359 aa12.97□□□□□ -0.33
RAB3GAP2-203ENST00000462353 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
RAB3GAP2-203ENST00000462353 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.33
RAB3GAP2-203ENST00000462353 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.33
RAB3GAP2-203ENST00000462353 ABTB2Q8N961 1025 aa12.96□□□□□ -0.33
RAB3GAP2-203ENST00000462353 SBNO1A3KN83 1393 aa12.96□□□□□ -0.33
RAB3GAP2-203ENST00000462353 CCDC184Q52MB2 194 aa12.96□□□□□ -0.34
RAB3GAP2-203ENST00000462353 LMOD2Q6P5Q4 547 aa12.96□□□□□ -0.34
RAB3GAP2-203ENST00000462353 ABCA3Q99758 1704 aa12.95□□□□□ -0.34
RAB3GAP2-203ENST00000462353 PHRF1Q9P1Y6 1649 aaKnown RBP12.95□□□□□ -0.34
RAB3GAP2-203ENST00000462353 SOX12O15370 315 aa12.95□□□□□ -0.34
RAB3GAP2-203ENST00000462353 CABLES1Q8TDN4 633 aa12.95□□□□□ -0.34
RAB3GAP2-203ENST00000462353 USP31Q70CQ4 1352 aa12.95□□□□□ -0.34
RAB3GAP2-203ENST00000462353 NLRP6P59044 892 aa12.94□□□□□ -0.34
RAB3GAP2-203ENST00000462353 NSD2O96028 1365 aa12.94□□□□□ -0.34
RAB3GAP2-203ENST00000462353 MAP2P11137 1827 aaKnown RBP12.93□□□□□ -0.34
RAB3GAP2-203ENST00000462353 SLIT3O75094 1523 aa12.93□□□□□ -0.34
RAB3GAP2-203ENST00000462353 NFAT5O94916 1531 aa12.93□□□□□ -0.34
RAB3GAP2-203ENST00000462353 PEAK1Q9H792 1746 aa12.93□□□□□ -0.34
RAB3GAP2-203ENST00000462353 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
RAB3GAP2-203ENST00000462353 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
RAB3GAP2-203ENST00000462353 HSPA1LP34931 641 aa12.92□□□□□ -0.34
RAB3GAP2-203ENST00000462353 COG3Q96JB2 828 aa12.92□□□□□ -0.34
RAB3GAP2-203ENST00000462353 USP19O94966 1318 aa12.91□□□□□ -0.34
RAB3GAP2-203ENST00000462353 LTN1O94822 1766 aa12.91□□□□□ -0.34
RAB3GAP2-203ENST00000462353 PPP2R1AP30153 589 aa12.91□□□□□ -0.34
RAB3GAP2-203ENST00000462353 RRS1Q15050 365 aaKnown RBP12.91□□□□□ -0.34
RAB3GAP2-203ENST00000462353 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
RAB3GAP2-203ENST00000462353 COL22A1Q8NFW1 1626 aaPredicted RBP12.9□□□□□ -0.34
RAB3GAP2-203ENST00000462353 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
RAB3GAP2-203ENST00000462353 RALBP1Q15311 655 aa12.89□□□□□ -0.35
RAB3GAP2-203ENST00000462353 GTF3C3Q9Y5Q9 886 aa12.89□□□□□ -0.35
RAB3GAP2-203ENST00000462353 ARHGEF10O15013 1369 aa12.89□□□□□ -0.35
RAB3GAP2-203ENST00000462353 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
RAB3GAP2-203ENST00000462353 POLKQ9UBT6 870 aa12.88□□□□□ -0.35
RAB3GAP2-203ENST00000462353 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
RAB3GAP2-203ENST00000462353 SHPRHQ149N8 1683 aa12.88□□□□□ -0.35
RAB3GAP2-203ENST00000462353 GCP02774 474 aa12.88□□□□□ -0.35
RAB3GAP2-203ENST00000462353 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
RAB3GAP2-203ENST00000462353 MAP3K19Q56UN5 1328 aa12.87□□□□□ -0.35
RAB3GAP2-203ENST00000462353 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
RAB3GAP2-203ENST00000462353 AATKQ6ZMQ8 1374 aa12.87□□□□□ -0.35
RAB3GAP2-203ENST00000462353 SMG6Q86US8 1419 aaKnown RBP12.87□□□□□ -0.35
RAB3GAP2-203ENST00000462353 MTHFSP49914 203 aa12.86□□□□□ -0.35
RAB3GAP2-203ENST00000462353 COL3A1P02461 1466 aaPredicted RBP12.86□□□□□ -0.35
RAB3GAP2-203ENST00000462353 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
RAB3GAP2-203ENST00000462353 COL18A1P39060 1754 aa12.86□□□□□ -0.35
RAB3GAP2-203ENST00000462353 PPM1GO15355 546 aaPredicted RBP12.85□□□□□ -0.35
RAB3GAP2-203ENST00000462353 KIAA0232Q92628 1395 aa12.84□□□□□ -0.35
RAB3GAP2-203ENST00000462353 LRP6O75581 1613 aa12.84□□□□□ -0.35
RAB3GAP2-203ENST00000462353 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
RAB3GAP2-203ENST00000462353 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
RAB3GAP2-203ENST00000462353 HSP90AB2PQ58FF8 381 aa12.83□□□□□ -0.36
RAB3GAP2-203ENST00000462353 ARHGEF25Q86VW2 580 aa12.83□□□□□ -0.36
RAB3GAP2-203ENST00000462353 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
RAB3GAP2-203ENST00000462353 CDK12Q9NYV4 1490 aaPredicted RBP12.82□□□□□ -0.36
RAB3GAP2-203ENST00000462353 LMO7Q8WWI1 1683 aa12.82□□□□□ -0.36
RAB3GAP2-203ENST00000462353 JCADQ9P266 1359 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms