RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 PALM3A6NDB9 673 aaPredicted RBP13.72□□□□□ -0.21
COL4A2-203ENST00000462309 SEMA3FQ13275 785 aa13.72□□□□□ -0.21
COL4A2-203ENST00000462309 FAM160A2Q8N612 972 aaPredicted RBP13.72□□□□□ -0.21
COL4A2-203ENST00000462309 EIF4G2P78344 907 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL4A2-203ENST00000462309 ZC3H4Q9UPT8 1303 aaKnown RBP13.7□□□□□ -0.22
COL4A2-203ENST00000462309 RFX1P22670 979 aa13.7□□□□□ -0.22
COL4A2-203ENST00000462309 MAP10Q9P2G4 905 aa13.7□□□□□ -0.22
COL4A2-203ENST00000462309 TFIP11Q9UBB9 837 aaKnown RBP13.7□□□□□ -0.22
COL4A2-203ENST00000462309 ZBTB7CA1YPR0 619 aa13.69□□□□□ -0.22
COL4A2-203ENST00000462309 ZBBXA8MT70 800 aa13.69□□□□□ -0.22
COL4A2-203ENST00000462309 DXOO77932 396 aaKnown RBP13.69□□□□□ -0.22
COL4A2-203ENST00000462309 FBXO45P0C2W1 286 aa13.69□□□□□ -0.22
COL4A2-203ENST00000462309 THSD4Q6ZMP0 1018 aa13.69□□□□□ -0.22
COL4A2-203ENST00000462309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.68□□□□□ -0.22
COL4A2-203ENST00000462309 MMP16P51512 607 aa13.68□□□□□ -0.22
COL4A2-203ENST00000462309 SPSB2Q99619 263 aa13.68□□□□□ -0.22
COL4A2-203ENST00000462309 EVA1BQ9NVM1 165 aa13.68□□□□□ -0.22
COL4A2-203ENST00000462309 KCTD17Q8N5Z5 321 aa13.67□□□□□ -0.22
COL4A2-203ENST00000462309 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
COL4A2-203ENST00000462309 PDE4CQ08493 712 aa13.65□□□□□ -0.22
COL4A2-203ENST00000462309 CCNYL3P0C7X3 344 aa13.64□□□□□ -0.23
COL4A2-203ENST00000462309 CTHP32929 405 aa13.64□□□□□ -0.23
COL4A2-203ENST00000462309 COPS2P61201 443 aa13.64□□□□□ -0.23
COL4A2-203ENST00000462309 KCNH2Q12809 1159 aa13.63□□□□□ -0.23
COL4A2-203ENST00000462309 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
COL4A2-203ENST00000462309 NYAP1Q6ZVC0 841 aa13.63□□□□□ -0.23
COL4A2-203ENST00000462309 MAFBQ9Y5Q3 323 aaPredicted RBP13.63□□□□□ -0.23
COL4A2-203ENST00000462309 NUDT12Q9BQG2 462 aa13.62□□□□□ -0.23
COL4A2-203ENST00000462309 ARMC2Q8NEN0 867 aa13.61□□□□□ -0.23
COL4A2-203ENST00000462309 GPSM3Q9Y4H4 160 aa13.61□□□□□ -0.23
COL4A2-203ENST00000462309 ATP9BO43861 1147 aa13.6□□□□□ -0.23
COL4A2-203ENST00000462309 ZPR1O75312 459 aa13.6□□□□□ -0.23
COL4A2-203ENST00000462309 PDXDC2PQ6P474 469 aa13.6□□□□□ -0.23
COL4A2-203ENST00000462309 GPKOWQ92917 476 aaPredicted RBP eCLIP13.6□□□□□ -0.23
COL4A2-203ENST00000462309 PRDM9Q9NQV7 894 aa13.6□□□□□ -0.23
COL4A2-203ENST00000462309 KCTD12Q96CX2 325 aaKnown RBP13.59□□□□□ -0.23
COL4A2-203ENST00000462309 ADH1BP00325 375 aa13.58□□□□□ -0.24
COL4A2-203ENST00000462309 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
COL4A2-203ENST00000462309 OCSTAMPQ9BR26 566 aa13.58□□□□□ -0.24
COL4A2-203ENST00000462309 USTQ9Y2C2 406 aa13.58□□□□□ -0.24
COL4A2-203ENST00000462309 ATG7O95352 703 aa13.57□□□□□ -0.24
COL4A2-203ENST00000462309 AEBP1Q8IUX7 1158 aa13.57□□□□□ -0.24
COL4A2-203ENST00000462309 PTK2Q05397 1052 aa13.56□□□□□ -0.24
COL4A2-203ENST00000462309 PIK3CDO00329 1044 aa13.55□□□□□ -0.24
COL4A2-203ENST00000462309 TLL1O43897 1013 aa13.55□□□□□ -0.24
COL4A2-203ENST00000462309 CSB-PGBD3P0DP91 1061 aa13.55□□□□□ -0.24
COL4A2-203ENST00000462309 MTRQ99707 1265 aa13.55□□□□□ -0.24
COL4A2-203ENST00000462309 MCCD1P59942 119 aaPredicted RBP13.54□□□□□ -0.24
COL4A2-203ENST00000462309 KANK4Q5T7N3 995 aaPredicted RBP13.54□□□□□ -0.24
COL4A2-203ENST00000462309 CDCA8Q53HL2 280 aa13.53□□□□□ -0.24
COL4A2-203ENST00000462309 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
COL4A2-203ENST00000462309 NBPF14Q5TI25 921 aa13.53□□□□□ -0.24
COL4A2-203ENST00000462309 PTCRAQ6ISU1 281 aaPredicted RBP13.52□□□□□ -0.25
COL4A2-203ENST00000462309 CEP126Q9P2H0 1117 aa13.52□□□□□ -0.25
COL4A2-203ENST00000462309 ZNF592Q92610 1267 aa13.51□□□□□ -0.25
COL4A2-203ENST00000462309 VRTNQ9H8Y1 702 aa13.51□□□□□ -0.25
COL4A2-203ENST00000462309 IL21Q9HBE4 155 aa13.51□□□□□ -0.25
COL4A2-203ENST00000462309 PHTF2Q8N3S3 785 aa13.5□□□□□ -0.25
COL4A2-203ENST00000462309 FAM174AQ8TBP5 190 aa13.5□□□□□ -0.25
COL4A2-203ENST00000462309 ZNF516Q92618 1163 aa13.5□□□□□ -0.25
COL4A2-203ENST00000462309 UNC93B1Q9H1C4 597 aa13.5□□□□□ -0.25
COL4A2-203ENST00000462309 PLA2G2EQ9NZK7 142 aa13.5□□□□□ -0.25
COL4A2-203ENST00000462309 PLEKHM2Q8IWE5 1019 aa13.49□□□□□ -0.25
COL4A2-203ENST00000462309 SLC6A16Q9GZN6 736 aa13.49□□□□□ -0.25
COL4A2-203ENST00000462309 SKIP12755 728 aa13.48□□□□□ -0.25
COL4A2-203ENST00000462309 SH3BP5LQ7L8J4 393 aa13.48□□□□□ -0.25
COL4A2-203ENST00000462309 TMEM88BA6NKF7 163 aa13.47□□□□□ -0.25
COL4A2-203ENST00000462309 BRD1O95696 1058 aa13.47□□□□□ -0.25
COL4A2-203ENST00000462309 ELOAQ14241 798 aaKnown RBP13.47□□□□□ -0.25
COL4A2-203ENST00000462309 ADAM32Q8TC27 787 aa13.47□□□□□ -0.25
COL4A2-203ENST00000462309 USP17L3A6NCW0 530 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 USP17L5A8MUK1 530 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 PTPN5P54829 565 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 USP17L2Q6R6M4 530 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 CCDC24Q8N4L8 307 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 ARHGAP9Q9BRR9 750 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 CCDC9Q9Y3X0 531 aaKnown RBP13.46□□□□□ -0.25
COL4A2-203ENST00000462309 PCDHB9Q9Y5E1 797 aa13.46□□□□□ -0.25
COL4A2-203ENST00000462309 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
COL4A2-203ENST00000462309 SLFNL1Q499Z3 407 aa13.44□□□□□ -0.26
COL4A2-203ENST00000462309 SH3RF1Q7Z6J0 888 aa13.43□□□□□ -0.26
COL4A2-203ENST00000462309 PATL2C9JE40 543 aaKnown RBP13.42□□□□□ -0.26
COL4A2-203ENST00000462309 LZTS3O60299 673 aaPredicted RBP13.42□□□□□ -0.26
COL4A2-203ENST00000462309 KCNA1Q09470 495 aa13.42□□□□□ -0.26
COL4A2-203ENST00000462309 ZBTB33Q86T24 672 aa13.42□□□□□ -0.26
COL4A2-203ENST00000462309 RNF135Q8IUD6 432 aa13.41□□□□□ -0.26
COL4A2-203ENST00000462309 DEPDC4Q8N2C3 294 aa13.41□□□□□ -0.26
COL4A2-203ENST00000462309 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
COL4A2-203ENST00000462309 PLPP7Q8NBV4 271 aa13.39□□□□□ -0.27
COL4A2-203ENST00000462309 BAP1Q92560 729 aa13.39□□□□□ -0.27
COL4A2-203ENST00000462309 GZF1Q9H116 711 aaPredicted RBP13.39□□□□□ -0.27
COL4A2-203ENST00000462309 MKRN1Q9UHC7 482 aaKnown RBP13.39□□□□□ -0.27
COL4A2-203ENST00000462309 ZMIZ1Q9ULJ6 1067 aa13.39□□□□□ -0.27
COL4A2-203ENST00000462309 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
COL4A2-203ENST00000462309 S1PR4O95977 384 aa13.38□□□□□ -0.27
COL4A2-203ENST00000462309 MAP7D1Q3KQU3 841 aa13.38□□□□□ -0.27
COL4A2-203ENST00000462309 NCOA4Q13772 614 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms