RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 CHD1LQ86WJ1 897 aa9.98□□□□□ -0.81
ERCC8-204ENST00000462279 DEPDC5O75140 1603 aa9.98□□□□□ -0.81
ERCC8-204ENST00000462279 SYCE3A1L190 88 aa9.98□□□□□ -0.81
ERCC8-204ENST00000462279 FAM177BA6PVY3 158 aa9.98□□□□□ -0.81
ERCC8-204ENST00000462279 CBX1P83916 185 aa9.98□□□□□ -0.81
ERCC8-204ENST00000462279 CSPP1Q1MSJ5 1256 aa9.98□□□□□ -0.81
ERCC8-204ENST00000462279 C1orf115Q9H7X2 142 aa9.98□□□□□ -0.81
ERCC8-204ENST00000462279 NEURL4Q96JN8 1562 aa9.97□□□□□ -0.81
ERCC8-204ENST00000462279 KIAA1210Q9ULL0 1709 aa9.97□□□□□ -0.81
ERCC8-204ENST00000462279 TPRNQ4KMQ1 711 aa9.97□□□□□ -0.81
ERCC8-204ENST00000462279 ATF7IPQ6VMQ6 1270 aa9.97□□□□□ -0.81
ERCC8-204ENST00000462279 TBC1D9Q6ZT07 1266 aa9.97□□□□□ -0.81
ERCC8-204ENST00000462279 SASS6Q6UVJ0 657 aa9.97□□□□□ -0.81
ERCC8-204ENST00000462279 MTERF4Q7Z6M4 381 aaKnown RBP9.97□□□□□ -0.81
ERCC8-204ENST00000462279 CCDC141Q6ZP82 1450 aa9.97□□□□□ -0.81
ERCC8-204ENST00000462279 ZC3H13Q5T200 1668 aaKnown RBP9.97□□□□□ -0.81
ERCC8-204ENST00000462279 ZNF445P59923 1031 aa9.97□□□□□ -0.81
ERCC8-204ENST00000462279 U2SURPO15042 1029 aaKnown RBP9.96□□□□□ -0.81
ERCC8-204ENST00000462279 NUCB1Q02818 461 aa9.96□□□□□ -0.81
ERCC8-204ENST00000462279 MADDQ8WXG6 1647 aa9.96□□□□□ -0.82
ERCC8-204ENST00000462279 ATP10AO60312 1499 aa9.96□□□□□ -0.82
ERCC8-204ENST00000462279 IFT140Q96RY7 1462 aa9.96□□□□□ -0.82
ERCC8-204ENST00000462279 HS1BP3Q53T59 392 aa9.96□□□□□ -0.82
ERCC8-204ENST00000462279 EIF2AK4Q9P2K8 1649 aaKnown RBP9.96□□□□□ -0.82
ERCC8-204ENST00000462279 KIF16BQ96L93 1317 aa9.95□□□□□ -0.82
ERCC8-204ENST00000462279 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
ERCC8-204ENST00000462279 CFAP53Q96M91 514 aa9.95□□□□□ -0.82
ERCC8-204ENST00000462279 LMBRD1Q9NUN5 540 aa9.95□□□□□ -0.82
ERCC8-204ENST00000462279 NPC1L1Q9UHC9 1359 aa9.95□□□□□ -0.82
ERCC8-204ENST00000462279 NUP160Q12769 1436 aa9.95□□□□□ -0.82
ERCC8-204ENST00000462279 FOXD4L6Q3SYB3 417 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-204ENST00000462279 BMP2KLQ5H9B9 411 aa9.95□□□□□ -0.82
ERCC8-204ENST00000462279 FOXD4L3Q6VB84 417 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-204ENST00000462279 CHMP7Q8WUX9 453 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-204ENST00000462279 CCDC94Q9BW85 323 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-204ENST00000462279 SLC12A5Q9H2X9 1139 aa9.95□□□□□ -0.82
ERCC8-204ENST00000462279 CCDC39Q9UFE4 941 aa9.95□□□□□ -0.82
ERCC8-204ENST00000462279 SYNMO15061 1565 aa9.94□□□□□ -0.82
ERCC8-204ENST00000462279 PDLIM2Q96JY6 352 aa9.94□□□□□ -0.82
ERCC8-204ENST00000462279 ZBTB40Q9NUA8 1239 aa9.94□□□□□ -0.82
ERCC8-204ENST00000462279 POLR3AO14802 1390 aaPredicted RBP9.94□□□□□ -0.82
ERCC8-204ENST00000462279 SCAF11Q99590 1463 aaKnown RBP9.94□□□□□ -0.82
ERCC8-204ENST00000462279 MYO3AQ8NEV4 1616 aa9.94□□□□□ -0.82
ERCC8-204ENST00000462279 NUCB2P80303 420 aa9.94□□□□□ -0.82
ERCC8-204ENST00000462279 ZNF830Q96NB3 372 aaPredicted RBP9.94□□□□□ -0.82
ERCC8-204ENST00000462279 GPT2Q8TD30 523 aa9.94□□□□□ -0.82
ERCC8-204ENST00000462279 IBTKQ9P2D0 1353 aaPredicted RBP9.93□□□□□ -0.82
ERCC8-204ENST00000462279 MAGI1Q96QZ7 1491 aaPredicted RBP9.93□□□□□ -0.82
ERCC8-204ENST00000462279 IGSF3O75054 1194 aa9.93□□□□□ -0.82
ERCC8-204ENST00000462279 ZGPATQ8N5A5 531 aaKnown RBP9.93□□□□□ -0.82
ERCC8-204ENST00000462279 FGD1P98174 961 aa9.93□□□□□ -0.82
ERCC8-204ENST00000462279 TMEM63CQ9P1W3 806 aa9.93□□□□□ -0.82
ERCC8-204ENST00000462279 NSFL1CQ9UNZ2 370 aaKnown RBP9.93□□□□□ -0.82
ERCC8-204ENST00000462279 KIAA2012Q0VF49 1180 aa9.92□□□□□ -0.82
ERCC8-204ENST00000462279 SPDYE4A6NLX3 237 aa9.92□□□□□ -0.82
ERCC8-204ENST00000462279 ZSCAN20P17040 1043 aaPredicted RBP9.92□□□□□ -0.82
ERCC8-204ENST00000462279 DMTNQ08495 405 aa9.92□□□□□ -0.82
ERCC8-204ENST00000462279 PHF23Q9BUL5 403 aaPredicted RBP9.92□□□□□ -0.82
ERCC8-204ENST00000462279 SHPRHQ149N8 1683 aa9.92□□□□□ -0.82
ERCC8-204ENST00000462279 SOCS7O14512 581 aa9.92□□□□□ -0.82
ERCC8-204ENST00000462279 C17orf53Q8N3J3 647 aaPredicted RBP9.92□□□□□ -0.82
ERCC8-204ENST00000462279 JPH4Q96JJ6 628 aa9.92□□□□□ -0.82
ERCC8-204ENST00000462279 NSD3Q9BZ95 1437 aa9.92□□□□□ -0.82
ERCC8-204ENST00000462279 IPO8O15397 1037 aaKnown RBP9.91□□□□□ -0.82
ERCC8-204ENST00000462279 PLCB2Q00722 1185 aa9.91□□□□□ -0.82
ERCC8-204ENST00000462279 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.91□□□□□ -0.82
ERCC8-204ENST00000462279 APBB1O00213 710 aa9.91□□□□□ -0.82
ERCC8-204ENST00000462279 PPP4R3BQ5MIZ7 849 aa9.91□□□□□ -0.82
ERCC8-204ENST00000462279 LRSAM1Q6UWE0 723 aa9.91□□□□□ -0.82
ERCC8-204ENST00000462279 ELL2O00472 640 aaPredicted RBP9.9□□□□□ -0.82
ERCC8-204ENST00000462279 CDC45O75419 566 aa9.9□□□□□ -0.82
ERCC8-204ENST00000462279 MCM5P33992 734 aa9.9□□□□□ -0.82
ERCC8-204ENST00000462279 RABEP1Q15276 862 aa9.9□□□□□ -0.82
ERCC8-204ENST00000462279 CLEC17AQ6ZS10 378 aa9.9□□□□□ -0.82
ERCC8-204ENST00000462279 NOL8Q76FK4 1167 aaKnown RBP9.9□□□□□ -0.82
ERCC8-204ENST00000462279 BBXQ8WY36 941 aaPredicted RBP9.9□□□□□ -0.82
ERCC8-204ENST00000462279 TRAK1Q9UPV9 953 aa9.9□□□□□ -0.82
ERCC8-204ENST00000462279 CCDC27Q2M243 656 aa9.89□□□□□ -0.83
ERCC8-204ENST00000462279 RSPH4AQ5TD94 716 aa9.89□□□□□ -0.83
ERCC8-204ENST00000462279 SCAPERQ9BY12 1400 aa9.89□□□□□ -0.83
ERCC8-204ENST00000462279 MYRIPQ8NFW9 859 aa9.89□□□□□ -0.83
ERCC8-204ENST00000462279 TTC37Q6PGP7 1564 aa9.89□□□□□ -0.83
ERCC8-204ENST00000462279 CHGAP10645 457 aaKnown RBP9.89□□□□□ -0.83
ERCC8-204ENST00000462279 SENP3Q9H4L4 574 aaPredicted RBP9.89□□□□□ -0.83
ERCC8-204ENST00000462279 TTC12Q9H892 705 aaPredicted RBP9.89□□□□□ -0.83
ERCC8-204ENST00000462279 VWDEQ8N2E2 1590 aa9.88□□□□□ -0.83
ERCC8-204ENST00000462279 CARMIL2Q6F5E8 1435 aa9.88□□□□□ -0.83
ERCC8-204ENST00000462279 ATP10BO94823 1461 aa9.88□□□□□ -0.83
ERCC8-204ENST00000462279 ATP2B3Q16720 1220 aa9.88□□□□□ -0.83
ERCC8-204ENST00000462279 TMPOP42166 694 aaKnown RBP9.88□□□□□ -0.83
ERCC8-204ENST00000462279 UTP14CQ5TAP6 766 aaKnown RBP9.88□□□□□ -0.83
ERCC8-204ENST00000462279 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
ERCC8-204ENST00000462279 ST18O60284 1047 aa9.87□□□□□ -0.83
ERCC8-204ENST00000462279 KDM5AP29375 1690 aaKnown RBP9.87□□□□□ -0.83
ERCC8-204ENST00000462279 GDPD2Q9HCC8 539 aa9.87□□□□□ -0.83
ERCC8-204ENST00000462279 TSPY26PQ9H489 355 aa9.87□□□□□ -0.83
ERCC8-204ENST00000462279 USP25Q9UHP3 1055 aa9.87□□□□□ -0.83
ERCC8-204ENST00000462279 KIF3AQ9Y496 699 aa9.87□□□□□ -0.83
ERCC8-204ENST00000462279 INO80Q9ULG1 1556 aaPredicted RBP9.87□□□□□ -0.83
ERCC8-204ENST00000462279 ERVK-7P63135 1459 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms