RNA–Protein interactions for RNA: ENST00000462078.1

POLR1A-205, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 469 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-205ENST00000462078 ACEP12821 1306 aa13.8□□□□□ -0.2
POLR1A-205ENST00000462078 ROCK2O75116 1388 aaKnown RBP13.8□□□□□ -0.2
POLR1A-205ENST00000462078 SRCAPQ6ZRS2 3230 aa13.79□□□□□ -0.2
POLR1A-205ENST00000462078 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
POLR1A-205ENST00000462078 COL14A1Q05707 1796 aaKnown RBP13.79□□□□□ -0.2
POLR1A-205ENST00000462078 FAM83GA6ND36 823 aa13.79□□□□□ -0.2
POLR1A-205ENST00000462078 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
POLR1A-205ENST00000462078 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
POLR1A-205ENST00000462078 BRD4O60885 1362 aaPredicted RBP13.78□□□□□ -0.2
POLR1A-205ENST00000462078 SBNO2Q9Y2G9 1366 aa13.78□□□□□ -0.2
POLR1A-205ENST00000462078 PPIP5K1Q6PFW1 1433 aa13.78□□□□□ -0.2
POLR1A-205ENST00000462078 AKAP12Q02952 1782 aa13.77□□□□□ -0.21
POLR1A-205ENST00000462078 LMOD2Q6P5Q4 547 aa13.77□□□□□ -0.21
POLR1A-205ENST00000462078 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.21
POLR1A-205ENST00000462078 CABP2Q9NPB3 220 aa13.77□□□□□ -0.21
POLR1A-205ENST00000462078 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
POLR1A-205ENST00000462078 ONECUT3O60422 494 aaPredicted RBP13.76□□□□□ -0.21
POLR1A-205ENST00000462078 VPS72Q15906 364 aa13.76□□□□□ -0.21
POLR1A-205ENST00000462078 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
POLR1A-205ENST00000462078 EVC2Q86UK5 1308 aa13.75□□□□□ -0.21
POLR1A-205ENST00000462078 SRPK2P78362 688 aaKnown RBP13.75□□□□□ -0.21
POLR1A-205ENST00000462078 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
POLR1A-205ENST00000462078 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
POLR1A-205ENST00000462078 USP19O94966 1318 aa13.73□□□□□ -0.21
POLR1A-205ENST00000462078 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
POLR1A-205ENST00000462078 NRKQ7Z2Y5 1582 aa13.73□□□□□ -0.21
POLR1A-205ENST00000462078 USP6P35125 1406 aa13.73□□□□□ -0.21
POLR1A-205ENST00000462078 LMO7Q8WWI1 1683 aa13.72□□□□□ -0.21
POLR1A-205ENST00000462078 CPSF1Q10570 1443 aaKnown RBP13.72□□□□□ -0.21
POLR1A-205ENST00000462078 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
POLR1A-205ENST00000462078 PIK3C2AO00443 1686 aa13.71□□□□□ -0.21
POLR1A-205ENST00000462078 CPDO75976 1380 aa13.71□□□□□ -0.22
POLR1A-205ENST00000462078 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.22
POLR1A-205ENST00000462078 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
POLR1A-205ENST00000462078 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
POLR1A-205ENST00000462078 ABTB2Q8N961 1025 aa13.7□□□□□ -0.22
POLR1A-205ENST00000462078 BTG4Q9NY30 223 aa13.7□□□□□ -0.22
POLR1A-205ENST00000462078 KIAA0232Q92628 1395 aa13.7□□□□□ -0.22
POLR1A-205ENST00000462078 SLIT3O75094 1523 aa13.69□□□□□ -0.22
POLR1A-205ENST00000462078 PUS7Q96PZ0 661 aaKnown RBP13.69□□□□□ -0.22
POLR1A-205ENST00000462078 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
POLR1A-205ENST00000462078 COL18A1P39060 1754 aa13.68□□□□□ -0.22
POLR1A-205ENST00000462078 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
POLR1A-205ENST00000462078 NUTM2GQ5VZR2 741 aa13.68□□□□□ -0.22
POLR1A-205ENST00000462078 NLRP13Q86W25 1043 aa13.68□□□□□ -0.22
POLR1A-205ENST00000462078 USP54Q70EL1 1684 aa13.68□□□□□ -0.22
POLR1A-205ENST00000462078 THSD7AQ9UPZ6 1657 aa13.68□□□□□ -0.22
POLR1A-205ENST00000462078 CAMTA1Q9Y6Y1 1673 aa13.68□□□□□ -0.22
POLR1A-205ENST00000462078 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
POLR1A-205ENST00000462078 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
POLR1A-205ENST00000462078 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
POLR1A-205ENST00000462078 SEPT12Q8IYM1 358 aa13.67□□□□□ -0.22
POLR1A-205ENST00000462078 TESK2Q96S53 571 aa13.67□□□□□ -0.22
POLR1A-205ENST00000462078 PRDM11Q9NQV5 511 aa13.67□□□□□ -0.22
POLR1A-205ENST00000462078 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
POLR1A-205ENST00000462078 EP400Q96L91 3159 aa13.67□□□□□ -0.22
POLR1A-205ENST00000462078 GCP02774 474 aa13.66□□□□□ -0.22
POLR1A-205ENST00000462078 TTC21BQ7Z4L5 1316 aa13.65□□□□□ -0.22
POLR1A-205ENST00000462078 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
POLR1A-205ENST00000462078 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
POLR1A-205ENST00000462078 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
POLR1A-205ENST00000462078 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
POLR1A-205ENST00000462078 TTC21AQ8NDW8 1320 aa13.64□□□□□ -0.23
POLR1A-205ENST00000462078 NLRP6P59044 892 aa13.63□□□□□ -0.23
POLR1A-205ENST00000462078 USP31Q70CQ4 1352 aa13.62□□□□□ -0.23
POLR1A-205ENST00000462078 KTN1Q86UP2 1357 aaKnown RBP13.62□□□□□ -0.23
POLR1A-205ENST00000462078 ST20-MTHFSA0A0A6YYL1 179 aa13.62□□□□□ -0.23
POLR1A-205ENST00000462078 CCDC9Q9Y3X0 531 aaKnown RBP13.62□□□□□ -0.23
POLR1A-205ENST00000462078 RGPD5Q99666 1765 aa13.62□□□□□ -0.23
POLR1A-205ENST00000462078 COL5A2P05997 1499 aaPredicted RBP13.61□□□□□ -0.23
POLR1A-205ENST00000462078 AATKQ6ZMQ8 1374 aa13.61□□□□□ -0.23
POLR1A-205ENST00000462078 NFAT5O94916 1531 aa13.61□□□□□ -0.23
POLR1A-205ENST00000462078 SLC24A1O60721 1099 aa13.61□□□□□ -0.23
POLR1A-205ENST00000462078 FAM98CQ17RN3 349 aaKnown RBP13.61□□□□□ -0.23
POLR1A-205ENST00000462078 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
POLR1A-205ENST00000462078 BLMP54132 1417 aaPredicted RBP13.6□□□□□ -0.23
POLR1A-205ENST00000462078 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
POLR1A-205ENST00000462078 SLC12A5Q9H2X9 1139 aa13.6□□□□□ -0.23
POLR1A-205ENST00000462078 ARHGEF25Q86VW2 580 aa13.59□□□□□ -0.23
POLR1A-205ENST00000462078 PCGF6Q9BYE7 350 aa13.59□□□□□ -0.23
POLR1A-205ENST00000462078 ABCC6O95255 1503 aa13.59□□□□□ -0.23
POLR1A-205ENST00000462078 PARP4Q9UKK3 1724 aaKnown RBP13.59□□□□□ -0.23
POLR1A-205ENST00000462078 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.23
POLR1A-205ENST00000462078 LARP1Q6PKG0 1096 aaKnown RBP13.58□□□□□ -0.24
POLR1A-205ENST00000462078 KCNH5Q8NCM2 988 aa13.58□□□□□ -0.24
POLR1A-205ENST00000462078 USP47Q96K76 1375 aa13.58□□□□□ -0.24
POLR1A-205ENST00000462078 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
POLR1A-205ENST00000462078 EDC4Q6P2E9 1401 aaKnown RBP13.57□□□□□ -0.24
POLR1A-205ENST00000462078 STRN4Q9NRL3 753 aa13.57□□□□□ -0.24
POLR1A-205ENST00000462078 AXIN2Q9Y2T1 843 aa13.57□□□□□ -0.24
POLR1A-205ENST00000462078 THRAP3Q9Y2W1 955 aaKnown RBP13.57□□□□□ -0.24
POLR1A-205ENST00000462078 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
POLR1A-205ENST00000462078 RGPD1P0DJD0 1748 aa13.56□□□□□ -0.24
POLR1A-205ENST00000462078 LTN1O94822 1766 aa13.56□□□□□ -0.24
POLR1A-205ENST00000462078 EVA1CP58658 441 aa13.56□□□□□ -0.24
POLR1A-205ENST00000462078 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
POLR1A-205ENST00000462078 TNS1Q9HBL0 1735 aaKnown RBP13.56□□□□□ -0.24
POLR1A-205ENST00000462078 CRB1P82279 1406 aa13.56□□□□□ -0.24
POLR1A-205ENST00000462078 HDGFL2Q7Z4V5 671 aaPredicted RBP13.55□□□□□ -0.24
POLR1A-205ENST00000462078 TCP11L2Q8N4U5 519 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms