RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 PRDM9Q9NQV7 894 aa7.74□□□□□ -1.17
FN1-215ENST00000461974 CCDC82Q8N4S0 544 aa7.73□□□□□ -1.17
FN1-215ENST00000461974 ZNF516Q92618 1163 aa7.73□□□□□ -1.17
FN1-215ENST00000461974 MAP10Q9P2G4 905 aa7.73□□□□□ -1.17
FN1-215ENST00000461974 ZNF777Q9ULD5 760 aaPredicted RBP7.73□□□□□ -1.17
FN1-215ENST00000461974 NBPF14Q5TI25 921 aa7.72□□□□□ -1.17
FN1-215ENST00000461974 PDXDC2PQ6P474 469 aa7.72□□□□□ -1.17
FN1-215ENST00000461974 ZNF592Q92610 1267 aa7.72□□□□□ -1.17
FN1-215ENST00000461974 KCNC4Q03721 635 aa7.71□□□□□ -1.18
FN1-215ENST00000461974 NR1H3Q13133 447 aa7.71□□□□□ -1.18
FN1-215ENST00000461974 GLMNQ92990 594 aa7.71□□□□□ -1.18
FN1-215ENST00000461974 CCDC97Q96F63 343 aaPredicted RBP7.71□□□□□ -1.18
FN1-215ENST00000461974 POM121CA8CG34 1229 aa7.7□□□□□ -1.18
FN1-215ENST00000461974 ZBBXA8MT70 800 aa7.7□□□□□ -1.18
FN1-215ENST00000461974 HOMEZQ8IX15 550 aa7.7□□□□□ -1.18
FN1-215ENST00000461974 ALG2Q9H553 416 aa7.7□□□□□ -1.18
FN1-215ENST00000461974 CTHP32929 405 aa7.69□□□□□ -1.18
FN1-215ENST00000461974 IFFO2Q5TF58 517 aa7.69□□□□□ -1.18
FN1-215ENST00000461974 CALR3Q96L12 384 aaKnown RBP7.69□□□□□ -1.18
FN1-215ENST00000461974 S1PR4O95977 384 aa7.68□□□□□ -1.18
FN1-215ENST00000461974 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
FN1-215ENST00000461974 MCCD1P59942 119 aaPredicted RBP7.68□□□□□ -1.18
FN1-215ENST00000461974 EIF4G2P78344 907 aaKnown RBP eCLIP7.68□□□□□ -1.18
FN1-215ENST00000461974 VAC14Q08AM6 782 aa7.68□□□□□ -1.18
FN1-215ENST00000461974 ADAMTS19Q8TE59 1207 aa7.68□□□□□ -1.18
FN1-215ENST00000461974 UNC93B1Q9H1C4 597 aa7.68□□□□□ -1.18
FN1-215ENST00000461974 NKX2-3Q8TAU0 364 aa7.67□□□□□ -1.18
FN1-215ENST00000461974 GGCXP38435 758 aa7.66□□□□□ -1.18
FN1-215ENST00000461974 PTK2Q05397 1052 aa7.66□□□□□ -1.18
FN1-215ENST00000461974 SH3BP5LQ7L8J4 393 aa7.66□□□□□ -1.18
FN1-215ENST00000461974 SH3RF1Q7Z6J0 888 aa7.66□□□□□ -1.18
FN1-215ENST00000461974 ANKLE1Q8NAG6 615 aa7.66□□□□□ -1.18
FN1-215ENST00000461974 FCF1Q9Y324 198 aaKnown RBP7.66□□□□□ -1.18
FN1-215ENST00000461974 HDGFL1Q5TGJ6 251 aa7.65□□□□□ -1.18
FN1-215ENST00000461974 MMRN1Q13201 1228 aa7.64□□□□□ -1.19
FN1-215ENST00000461974 OCSTAMPQ9BR26 566 aa7.64□□□□□ -1.19
FN1-215ENST00000461974 PPP1R15AO75807 674 aaPredicted RBP7.63□□□□□ -1.19
FN1-215ENST00000461974 SEMA3FQ13275 785 aa7.63□□□□□ -1.19
FN1-215ENST00000461974 PTCRAQ6ISU1 281 aaPredicted RBP7.63□□□□□ -1.19
FN1-215ENST00000461974 CCDC24Q8N4L8 307 aa7.63□□□□□ -1.19
FN1-215ENST00000461974 NFATC2IPQ8NCF5 419 aa7.63□□□□□ -1.19
FN1-215ENST00000461974 RNF223E7ERA6 249 aa7.62□□□□□ -1.19
FN1-215ENST00000461974 BPHLQ86WA6 291 aaPredicted RBP7.62□□□□□ -1.19
FN1-215ENST00000461974 ARID3AQ99856 593 aa7.62□□□□□ -1.19
FN1-215ENST00000461974 ZNF511Q8NB15 262 aa7.61□□□□□ -1.19
FN1-215ENST00000461974 UCN2Q96RP3 112 aa7.61□□□□□ -1.19
FN1-215ENST00000461974 ARHGAP9Q9BRR9 750 aa7.61□□□□□ -1.19
FN1-215ENST00000461974 C1QTNF2Q9BXJ5 285 aa7.61□□□□□ -1.19
FN1-215ENST00000461974 PPP1R12CQ9BZL4 782 aa7.61□□□□□ -1.19
FN1-215ENST00000461974 RPIAP49247 311 aa7.6□□□□□ -1.19
FN1-215ENST00000461974 WNT7BP56706 349 aa7.6□□□□□ -1.19
FN1-215ENST00000461974 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.6□□□□□ -1.19
FN1-215ENST00000461974 CFAP70Q5T0N1 1121 aa7.59□□□□□ -1.19
FN1-215ENST00000461974 PPP1R18Q6NYC8 613 aa7.59□□□□□ -1.19
FN1-215ENST00000461974 TRMT44Q8IYL2 757 aaKnown RBP7.59□□□□□ -1.19
FN1-215ENST00000461974 ADAM32Q8TC27 787 aa7.59□□□□□ -1.19
FN1-215ENST00000461974 CDV3Q9UKY7 258 aaKnown RBP7.59□□□□□ -1.19
FN1-215ENST00000461974 PALM3A6NDB9 673 aaPredicted RBP7.58□□□□□ -1.2
FN1-215ENST00000461974 ZBTB24O43167 697 aaPredicted RBP7.58□□□□□ -1.2
FN1-215ENST00000461974 TRIM32Q13049 653 aa7.58□□□□□ -1.2
FN1-215ENST00000461974 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
FN1-215ENST00000461974 CCDC125Q86Z20 511 aa7.58□□□□□ -1.2
FN1-215ENST00000461974 BAP1Q92560 729 aa7.58□□□□□ -1.2
FN1-215ENST00000461974 CHIC2Q9UKJ5 165 aa7.58□□□□□ -1.2
FN1-215ENST00000461974 ATP9BO43861 1147 aa7.57□□□□□ -1.2
FN1-215ENST00000461974 LZTS3O60299 673 aaPredicted RBP7.57□□□□□ -1.2
FN1-215ENST00000461974 SRPK2P78362 688 aaKnown RBP7.57□□□□□ -1.2
FN1-215ENST00000461974 ERFEQ4G0M1 354 aa7.57□□□□□ -1.2
FN1-215ENST00000461974 PBXIP1Q96AQ6 731 aa7.57□□□□□ -1.2
FN1-215ENST00000461974 SH3BP2P78314 561 aa7.56□□□□□ -1.2
FN1-215ENST00000461974 PLA2G2CQ5R387 149 aa7.56□□□□□ -1.2
FN1-215ENST00000461974 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
FN1-215ENST00000461974 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
FN1-215ENST00000461974 MAFBQ9Y5Q3 323 aaPredicted RBP7.56□□□□□ -1.2
FN1-215ENST00000461974 PPEF1O14829 653 aaPredicted RBP7.55□□□□□ -1.2
FN1-215ENST00000461974 VARSP26640 1264 aaKnown RBP7.55□□□□□ -1.2
FN1-215ENST00000461974 NBPF20Q3BBV1 942 aa7.55□□□□□ -1.2
FN1-215ENST00000461974 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
FN1-215ENST00000461974 SEPT12Q8IYM1 358 aa7.55□□□□□ -1.2
FN1-215ENST00000461974 PHTF2Q8N3S3 785 aa7.55□□□□□ -1.2
FN1-215ENST00000461974 MPNDQ8N594 471 aa7.55□□□□□ -1.2
FN1-215ENST00000461974 MAP4K5Q9Y4K4 846 aa7.55□□□□□ -1.2
FN1-215ENST00000461974 MAP7D1Q3KQU3 841 aa7.54□□□□□ -1.2
FN1-215ENST00000461974 FOXJ1Q92949 421 aa7.54□□□□□ -1.2
FN1-215ENST00000461974 SLC10A4Q96EP9 437 aa7.54□□□□□ -1.2
FN1-215ENST00000461974 TFIP11Q9UBB9 837 aaKnown RBP7.54□□□□□ -1.2
FN1-215ENST00000461974 PCDHB9Q9Y5E1 797 aa7.54□□□□□ -1.2
FN1-215ENST00000461974 LINC01559Q495D7 138 aa7.53□□□□□ -1.2
FN1-215ENST00000461974 SLFNL1Q499Z3 407 aa7.53□□□□□ -1.2
FN1-215ENST00000461974 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
FN1-215ENST00000461974 TBC1D9Q6ZT07 1266 aa7.53□□□□□ -1.2
FN1-215ENST00000461974 DZIP3Q86Y13 1208 aaKnown RBP7.53□□□□□ -1.2
FN1-215ENST00000461974 MAGEB6P1A0A0J9YX57 407 aa7.52□□□□□ -1.21
FN1-215ENST00000461974 ESPNB1AK53 854 aa7.52□□□□□ -1.21
FN1-215ENST00000461974 CD2BP2O95400 341 aaKnown RBP7.52□□□□□ -1.21
FN1-215ENST00000461974 SKOR1P84550 965 aa7.52□□□□□ -1.21
FN1-215ENST00000461974 PDE4CQ08493 712 aa7.52□□□□□ -1.21
FN1-215ENST00000461974 AGERQ15109 404 aa7.52□□□□□ -1.21
FN1-215ENST00000461974 USP17L5A8MUK1 530 aa7.51□□□□□ -1.21
FN1-215ENST00000461974 ATG7O95352 703 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms