RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 CCDC144AA2RUR9 1427 aa11.16□□□□□ -0.62
TRAPPC10-205ENST00000461889 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
TRAPPC10-205ENST00000461889 RGPD3A6NKT7 1758 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC10-205ENST00000461889 RGPD4Q7Z3J3 1758 aa11.16□□□□□ -0.62
TRAPPC10-205ENST00000461889 AATKQ6ZMQ8 1374 aa11.16□□□□□ -0.62
TRAPPC10-205ENST00000461889 PLSCR1O15162 318 aa11.15□□□□□ -0.62
TRAPPC10-205ENST00000461889 CABLES1Q8TDN4 633 aa11.15□□□□□ -0.62
TRAPPC10-205ENST00000461889 ARXQ96QS3 562 aa11.15□□□□□ -0.62
TRAPPC10-205ENST00000461889 MTFR1LQ9H019 292 aa11.15□□□□□ -0.62
TRAPPC10-205ENST00000461889 BTG4Q9NY30 223 aa11.15□□□□□ -0.62
TRAPPC10-205ENST00000461889 MYOM3Q5VTT5 1437 aa11.15□□□□□ -0.62
TRAPPC10-205ENST00000461889 RRBP1Q9P2E9 1410 aaKnown RBP11.15□□□□□ -0.62
TRAPPC10-205ENST00000461889 ROBO2Q9HCK4 1378 aa11.15□□□□□ -0.63
TRAPPC10-205ENST00000461889 IQGAP3Q86VI3 1631 aa11.14□□□□□ -0.63
TRAPPC10-205ENST00000461889 CDC42BPGQ6DT37 1551 aa11.14□□□□□ -0.63
TRAPPC10-205ENST00000461889 ABCA3Q99758 1704 aa11.13□□□□□ -0.63
TRAPPC10-205ENST00000461889 HFM1A2PYH4 1435 aa11.13□□□□□ -0.63
TRAPPC10-205ENST00000461889 TNS3Q68CZ2 1445 aa11.12□□□□□ -0.63
TRAPPC10-205ENST00000461889 ABCB7O75027 752 aa11.12□□□□□ -0.63
TRAPPC10-205ENST00000461889 KRT28Q7Z3Y7 464 aa11.12□□□□□ -0.63
TRAPPC10-205ENST00000461889 C11orf95C9JLR9 678 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC10-205ENST00000461889 GRIN3BO60391 1043 aa11.11□□□□□ -0.63
TRAPPC10-205ENST00000461889 WWC3Q9ULE0 1092 aa11.11□□□□□ -0.63
TRAPPC10-205ENST00000461889 COL14A1Q05707 1796 aaKnown RBP11.11□□□□□ -0.63
TRAPPC10-205ENST00000461889 SPATA31A1Q5TZJ5 1347 aa11.1□□□□□ -0.63
TRAPPC10-205ENST00000461889 PCNTO95613 3336 aa11.1□□□□□ -0.63
TRAPPC10-205ENST00000461889 SBNO1A3KN83 1393 aa11.09□□□□□ -0.63
TRAPPC10-205ENST00000461889 ARHGEF10O15013 1369 aa11.09□□□□□ -0.63
TRAPPC10-205ENST00000461889 PSME1Q06323 249 aa11.09□□□□□ -0.63
TRAPPC10-205ENST00000461889 PDE3BQ13370 1112 aa11.09□□□□□ -0.63
TRAPPC10-205ENST00000461889 KLRG1Q96E93 195 aa11.09□□□□□ -0.63
TRAPPC10-205ENST00000461889 KIF1AQ12756 1690 aa11.08□□□□□ -0.64
TRAPPC10-205ENST00000461889 ADCY9O60503 1353 aa11.08□□□□□ -0.64
TRAPPC10-205ENST00000461889 BCL11BQ9C0K0 894 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC10-205ENST00000461889 KIF3CO14782 793 aa11.06□□□□□ -0.64
TRAPPC10-205ENST00000461889 SLC15A2Q16348 729 aa11.06□□□□□ -0.64
TRAPPC10-205ENST00000461889 BARGINQ6ZT62 677 aa11.06□□□□□ -0.64
TRAPPC10-205ENST00000461889 PROM2Q8N271 834 aa11.06□□□□□ -0.64
TRAPPC10-205ENST00000461889 STK32BQ9NY57 414 aa11.05□□□□□ -0.64
TRAPPC10-205ENST00000461889 ANKRD30AQ9BXX3 1397 aa11.04□□□□□ -0.64
TRAPPC10-205ENST00000461889 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
TRAPPC10-205ENST00000461889 NAIPQ13075 1403 aa11.02□□□□□ -0.64
TRAPPC10-205ENST00000461889 WDR90Q96KV7 1748 aa11.02□□□□□ -0.65
TRAPPC10-205ENST00000461889 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.656e-6■□□□□ 10.8
TRAPPC10-205ENST00000461889 ZNF219Q9P2Y4 722 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC10-205ENST00000461889 E9PCH4 1651 aa11.01□□□□□ -0.65
TRAPPC10-205ENST00000461889 TOMM70O94826 608 aa11.01□□□□□ -0.65
TRAPPC10-205ENST00000461889 ZNF526Q8TF50 670 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC10-205ENST00000461889 DAPK1P53355 1430 aa11.01□□□□□ -0.65
TRAPPC10-205ENST00000461889 NUTM2FA1L443 756 aa11□□□□□ -0.65
TRAPPC10-205ENST00000461889 PLEKHG5O94827 1062 aa11□□□□□ -0.65
TRAPPC10-205ENST00000461889 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
TRAPPC10-205ENST00000461889 DHX57Q6P158 1386 aaKnown RBP11□□□□□ -0.65
TRAPPC10-205ENST00000461889 TECPR2O15040 1411 aa11□□□□□ -0.65
TRAPPC10-205ENST00000461889 TNS2Q63HR2 1409 aa11□□□□□ -0.65
TRAPPC10-205ENST00000461889 ZNF326Q5BKZ1 582 aaKnown RBP10.99□□□□□ -0.65
TRAPPC10-205ENST00000461889 PLSCR2Q9NRY7 297 aa10.99□□□□□ -0.65
TRAPPC10-205ENST00000461889 PEAK1Q9H792 1746 aa10.98□□□□□ -0.65
TRAPPC10-205ENST00000461889 FMN2Q9NZ56 1722 aa10.98□□□□□ -0.65
TRAPPC10-205ENST00000461889 SBF2Q86WG5 1849 aa10.98□□□□□ -0.65
TRAPPC10-205ENST00000461889 NLGN2Q8NFZ4 835 aa10.98□□□□□ -0.65
TRAPPC10-205ENST00000461889 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
TRAPPC10-205ENST00000461889 NRXN1Q9ULB1 1477 aa10.98□□□□□ -0.65
TRAPPC10-205ENST00000461889 TXNRD1Q16881 649 aa10.97□□□□□ -0.65
TRAPPC10-205ENST00000461889 OVOS2A0A0G2JMS6 1433 aa10.97□□□□□ -0.65
TRAPPC10-205ENST00000461889 OVOS2A0A0J9YW53 1432 aa10.97□□□□□ -0.65
TRAPPC10-205ENST00000461889 OVOS2Q6IE36 1432 aa10.97□□□□□ -0.65
TRAPPC10-205ENST00000461889 COL24A1Q17RW2 1714 aa10.97□□□□□ -0.65
TRAPPC10-205ENST00000461889 HAX1O00165 279 aa10.96□□□□□ -0.65
TRAPPC10-205ENST00000461889 SLC16A10Q8TF71 515 aa10.96□□□□□ -0.65
TRAPPC10-205ENST00000461889 PRDM11Q9NQV5 511 aa10.96□□□□□ -0.65
TRAPPC10-205ENST00000461889 ANKRD50Q9ULJ7 1429 aa10.95□□□□□ -0.66
TRAPPC10-205ENST00000461889 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
TRAPPC10-205ENST00000461889 TCP11L2Q8N4U5 519 aa10.95□□□□□ -0.66
TRAPPC10-205ENST00000461889 THRAP3Q9Y2W1 955 aaKnown RBP10.95□□□□□ -0.66
TRAPPC10-205ENST00000461889 PARP4Q9UKK3 1724 aaKnown RBP10.95□□□□□ -0.66
TRAPPC10-205ENST00000461889 HSPA1AP0DMV8 641 aaKnown RBP10.94□□□□□ -0.66
TRAPPC10-205ENST00000461889 HSPA1BP0DMV9 641 aaKnown RBP10.94□□□□□ -0.66
TRAPPC10-205ENST00000461889 POLD1P28340 1107 aa10.94□□□□□ -0.66
TRAPPC10-205ENST00000461889 NCBP3Q53F19 620 aaKnown RBP10.94□□□□□ -0.66
TRAPPC10-205ENST00000461889 PTF1AQ7RTS3 328 aa10.94□□□□□ -0.66
TRAPPC10-205ENST00000461889 KLHL34Q8N239 644 aa10.94□□□□□ -0.66
TRAPPC10-205ENST00000461889 USP35Q9P2H5 1018 aa10.94□□□□□ -0.66
TRAPPC10-205ENST00000461889 BCL9O00512 1426 aa10.93□□□□□ -0.66
TRAPPC10-205ENST00000461889 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC10-205ENST00000461889 STRN4Q9NRL3 753 aa10.93□□□□□ -0.66
TRAPPC10-205ENST00000461889 CHIC2Q9UKJ5 165 aa10.93□□□□□ -0.66
TRAPPC10-205ENST00000461889 ATP7BP35670 1465 aa10.93□□□□□ -0.66
TRAPPC10-205ENST00000461889 ALS2Q96Q42 1657 aa10.92□□□□□ -0.66
TRAPPC10-205ENST00000461889 HTRA3P83110 453 aa10.92□□□□□ -0.66
TRAPPC10-205ENST00000461889 ARHGEF28Q8N1W1 1705 aaKnown RBP10.92□□□□□ -0.66
TRAPPC10-205ENST00000461889 CRYBG1Q9Y4K1 1723 aa10.92□□□□□ -0.66
TRAPPC10-205ENST00000461889 SSH2Q76I76 1423 aa10.92□□□□□ -0.66
TRAPPC10-205ENST00000461889 RBM46Q8TBY0 533 aaKnown RBP10.91□□□□□ -0.66
TRAPPC10-205ENST00000461889 TRPM3Q9HCF6 1732 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC10-205ENST00000461889 KIAA0232Q92628 1395 aa10.9□□□□□ -0.66
TRAPPC10-205ENST00000461889 APLP2Q06481 763 aa10.9□□□□□ -0.66
TRAPPC10-205ENST00000461889 FSTL1Q12841 308 aa10.9□□□□□ -0.66
TRAPPC10-205ENST00000461889 WAPLQ7Z5K2 1190 aa10.9□□□□□ -0.66
TRAPPC10-205ENST00000461889 RGPD8O14715 1765 aaPredicted RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms