RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 POGZQ7Z3K3 1410 aa15.12■□□□□ 0.01
SCNM1-204ENST00000461862 NBPF26B4DH59 902 aa15.12■□□□□ 0.01
SCNM1-204ENST00000461862 HNRNPMP52272 730 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCNM1-204ENST00000461862 HAP1P54257 671 aaPredicted RBP15.12■□□□□ 0.01
SCNM1-204ENST00000461862 PADI6Q6TGC4 694 aa15.12■□□□□ 0.01
SCNM1-204ENST00000461862 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.12■□□□□ 0.01
SCNM1-204ENST00000461862 PNMA3Q9UL41 463 aa15.12■□□□□ 0.01
SCNM1-204ENST00000461862 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
SCNM1-204ENST00000461862 CFAP74Q9C0B2 1584 aa15.11■□□□□ 0.01
SCNM1-204ENST00000461862 C9orf84Q5VXU9 1444 aa15.11■□□□□ 0.01
SCNM1-204ENST00000461862 LRCH3Q96II8 777 aa15.11■□□□□ 0.01
SCNM1-204ENST00000461862 NCOA1Q15788 1441 aa15.1■□□□□ 0.01
SCNM1-204ENST00000461862 SIGLEC1Q9BZZ2 1709 aa15.09■□□□□ 0.01
SCNM1-204ENST00000461862 NUDT18Q6ZVK8 323 aa15.09■□□□□ 0.01
SCNM1-204ENST00000461862 CHIC2Q9UKJ5 165 aa15.09■□□□□ 0.01
SCNM1-204ENST00000461862 PLXNC1O60486 1568 aa15.09■□□□□ 0.01
SCNM1-204ENST00000461862 SAMD7Q7Z3H4 446 aa15.08■□□□□ 0
SCNM1-204ENST00000461862 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
SCNM1-204ENST00000461862 HPS5Q9UPZ3 1129 aa15.08■□□□□ 0
SCNM1-204ENST00000461862 IFFO2Q5TF58 517 aa15.07■□□□□ 0
SCNM1-204ENST00000461862 TSPY4P0CV99 314 aa15.06■□□□□ 0
SCNM1-204ENST00000461862 TSPY10P0CW01 314 aa15.06■□□□□ 0
SCNM1-204ENST00000461862 TSR3Q9UJK0 312 aaKnown RBP15.06■□□□□ 0
SCNM1-204ENST00000461862 KDM2AQ9Y2K7 1162 aa15.06■□□□□ 0
SCNM1-204ENST00000461862 PTGDRQ13258 359 aa15.05■□□□□ -0
SCNM1-204ENST00000461862 ZMYM4Q5VZL5 1548 aa15.04■□□□□ -0
SCNM1-204ENST00000461862 NYAP1Q6ZVC0 841 aa15.04■□□□□ -0
SCNM1-204ENST00000461862 KDM5CP41229 1560 aa15.03■□□□□ -0
SCNM1-204ENST00000461862 ARHGEF40Q8TER5 1519 aa15.03■□□□□ -0
SCNM1-204ENST00000461862 ITGBL1O95965 494 aaPredicted RBP15.03■□□□□ -0
SCNM1-204ENST00000461862 ZFYVE16Q7Z3T8 1539 aa15.02□□□□□ -0.01
SCNM1-204ENST00000461862 ANKRD50Q9ULJ7 1429 aa15.01□□□□□ -0.01
SCNM1-204ENST00000461862 KIF15Q9NS87 1388 aa15.01□□□□□ -0.01
SCNM1-204ENST00000461862 ABCA6Q8N139 1617 aa15.01□□□□□ -0.01
SCNM1-204ENST00000461862 TESPA1A2RU30 521 aaPredicted RBP15□□□□□ -0.01
SCNM1-204ENST00000461862 KDM5DQ9BY66 1539 aa15□□□□□ -0.01
SCNM1-204ENST00000461862 ZNF518AQ6AHZ1 1483 aa15□□□□□ -0.01
SCNM1-204ENST00000461862 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
SCNM1-204ENST00000461862 DIP2CQ9Y2E4 1556 aa14.99□□□□□ -0.01
SCNM1-204ENST00000461862 KIDINS220Q9ULH0 1771 aa14.99□□□□□ -0.01
SCNM1-204ENST00000461862 DUOX2Q9NRD8 1548 aa14.99□□□□□ -0.01
SCNM1-204ENST00000461862 INO80Q9ULG1 1556 aaPredicted RBP14.98□□□□□ -0.01
SCNM1-204ENST00000461862 HECW2Q9P2P5 1572 aa14.98□□□□□ -0.01
SCNM1-204ENST00000461862 A0A0G2JS52 829 aa14.97□□□□□ -0.01
SCNM1-204ENST00000461862 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
SCNM1-204ENST00000461862 EYA1Q99502 592 aa14.97□□□□□ -0.01
SCNM1-204ENST00000461862 MLH3Q9UHC1 1453 aa14.96□□□□□ -0.01
SCNM1-204ENST00000461862 UNC13BO14795 1591 aa14.96□□□□□ -0.01
SCNM1-204ENST00000461862 PPP4CP60510 307 aa14.96□□□□□ -0.01
SCNM1-204ENST00000461862 SPAG9O60271 1321 aaKnown RBP14.95□□□□□ -0.02
SCNM1-204ENST00000461862 ERBINQ96RT1 1412 aa14.95□□□□□ -0.02
SCNM1-204ENST00000461862 MLECQ14165 292 aa14.95□□□□□ -0.02
SCNM1-204ENST00000461862 TRIM52Q96A61 297 aa14.95□□□□□ -0.02
SCNM1-204ENST00000461862 TIMELESSQ9UNS1 1208 aa14.95□□□□□ -0.02
SCNM1-204ENST00000461862 PZPP20742 1482 aa14.95□□□□□ -0.02
SCNM1-204ENST00000461862 ATP7AQ04656 1500 aa14.94□□□□□ -0.02
SCNM1-204ENST00000461862 ATP10AO60312 1499 aa14.94□□□□□ -0.02
SCNM1-204ENST00000461862 MAGI2Q86UL8 1455 aa14.94□□□□□ -0.02
SCNM1-204ENST00000461862 SWT1Q5T5J6 900 aaKnown RBP14.93□□□□□ -0.02
SCNM1-204ENST00000461862 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
SCNM1-204ENST00000461862 RBM26Q5T8P6 1007 aaKnown RBP14.92□□□□□ -0.02
SCNM1-204ENST00000461862 MPHOSPH9Q99550 1183 aa14.92□□□□□ -0.02
SCNM1-204ENST00000461862 RNF40O75150 1001 aa14.91□□□□□ -0.02
SCNM1-204ENST00000461862 ADGRG1Q9Y653 693 aa14.91□□□□□ -0.02
SCNM1-204ENST00000461862 EIF2AK4Q9P2K8 1649 aaKnown RBP14.91□□□□□ -0.02
SCNM1-204ENST00000461862 FAM161AQ3B820 660 aa14.9□□□□□ -0.02
SCNM1-204ENST00000461862 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
SCNM1-204ENST00000461862 FCHSD2O94868 740 aa14.89□□□□□ -0.03
SCNM1-204ENST00000461862 BCORL1Q5H9F3 1711 aa14.88□□□□□ -0.03
SCNM1-204ENST00000461862 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
SCNM1-204ENST00000461862 MADDQ8WXG6 1647 aa14.88□□□□□ -0.03
SCNM1-204ENST00000461862 KCNC4Q03721 635 aa14.87□□□□□ -0.03
SCNM1-204ENST00000461862 ADAMTSL3P82987 1691 aa14.87□□□□□ -0.03
SCNM1-204ENST00000461862 FAM135AQ9P2D6 1515 aa14.87□□□□□ -0.03
SCNM1-204ENST00000461862 GPR37O15354 613 aa14.86□□□□□ -0.03
SCNM1-204ENST00000461862 APLP1P51693 650 aa14.86□□□□□ -0.03
SCNM1-204ENST00000461862 HDGFP51858 240 aaKnown RBP14.86□□□□□ -0.03
SCNM1-204ENST00000461862 A2MP01023 1474 aa14.86□□□□□ -0.03
SCNM1-204ENST00000461862 NUP155O75694 1391 aa14.85□□□□□ -0.03
SCNM1-204ENST00000461862 ANKRD30BQ9BXX2 1392 aa14.85□□□□□ -0.03
SCNM1-204ENST00000461862 TJAP1Q5JTD0 557 aa14.85□□□□□ -0.03
SCNM1-204ENST00000461862 TONSLQ96HA7 1378 aa14.85□□□□□ -0.03
SCNM1-204ENST00000461862 VSIG10Q8N0Z9 540 aa14.84□□□□□ -0.03
SCNM1-204ENST00000461862 SIN3AQ96ST3 1273 aa14.84□□□□□ -0.03
SCNM1-204ENST00000461862 RPRD2Q5VT52 1461 aaKnown RBP14.83□□□□□ -0.03
SCNM1-204ENST00000461862 REREQ9P2R6 1566 aa14.83□□□□□ -0.04
SCNM1-204ENST00000461862 SLF2Q8IX21 1173 aa14.83□□□□□ -0.04
SCNM1-204ENST00000461862 RIMS1Q86UR5 1692 aaKnown RBP14.82□□□□□ -0.04
SCNM1-204ENST00000461862 DNAJB2P25686 324 aa14.82□□□□□ -0.04
SCNM1-204ENST00000461862 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
SCNM1-204ENST00000461862 SMYD5Q6GMV2 418 aa14.82□□□□□ -0.04
SCNM1-204ENST00000461862 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
SCNM1-204ENST00000461862 CEBPAP49715 358 aaPredicted RBP14.81□□□□□ -0.04
SCNM1-204ENST00000461862 MTRQ99707 1265 aa14.81□□□□□ -0.04
SCNM1-204ENST00000461862 TMEM134Q9H6X4 195 aa14.81□□□□□ -0.04
SCNM1-204ENST00000461862 AGLP35573 1532 aa14.81□□□□□ -0.04
SCNM1-204ENST00000461862 RGS20O76081 388 aa14.8□□□□□ -0.04
SCNM1-204ENST00000461862 HIC1Q14526 733 aa14.8□□□□□ -0.04
SCNM1-204ENST00000461862 DHX29Q7Z478 1369 aaKnown RBP14.8□□□□□ -0.04
SCNM1-204ENST00000461862 PRDM15P57071 1507 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms