RNA–Protein interactions for RNA: ENST00000461684.5

CHRD-210, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-210ENST00000461684 ITSN1Q15811 1721 aa23.29■■□□□ 1.32
CHRD-210ENST00000461684 BTG4Q9NY30 223 aa23.29■■□□□ 1.32
CHRD-210ENST00000461684 PRR36Q9H6K5 1346 aa23.29■■□□□ 1.32
CHRD-210ENST00000461684 NGDNQ8NEJ9 315 aaKnown RBP23.27■■□□□ 1.32
CHRD-210ENST00000461684 CRYBG1Q9Y4K1 1723 aa23.27■■□□□ 1.32
CHRD-210ENST00000461684 ARHGEF28Q8N1W1 1705 aaKnown RBP23.26■■□□□ 1.31
CHRD-210ENST00000461684 FAM98CQ17RN3 349 aaKnown RBP23.25■■□□□ 1.31
CHRD-210ENST00000461684 PAK3O75914 559 aaPredicted RBP23.24■■□□□ 1.31
CHRD-210ENST00000461684 TRIM26Q12899 539 aaPredicted RBP23.24■■□□□ 1.31
CHRD-210ENST00000461684 BAG6P46379 1132 aa23.22■■□□□ 1.31
CHRD-210ENST00000461684 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
CHRD-210ENST00000461684 SPATA31A5Q5VU36 1347 aa23.2■■□□□ 1.3
CHRD-210ENST00000461684 SPATA31A7Q8IWB4 1347 aa23.2■■□□□ 1.3
CHRD-210ENST00000461684 HRCP23327 699 aa23.2■■□□□ 1.3
CHRD-210ENST00000461684 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
CHRD-210ENST00000461684 PRDM11Q9NQV5 511 aa23.19■■□□□ 1.3
CHRD-210ENST00000461684 ATP7BP35670 1465 aa23.18■■□□□ 1.3
CHRD-210ENST00000461684 LRP5O75197 1615 aa23.18■■□□□ 1.3
CHRD-210ENST00000461684 THSD7AQ9UPZ6 1657 aa23.17■■□□□ 1.3
CHRD-210ENST00000461684 PHRF1Q9P1Y6 1649 aaKnown RBP23.16■■□□□ 1.3
CHRD-210ENST00000461684 KIAA1210Q9ULL0 1709 aa23.15■■□□□ 1.3
CHRD-210ENST00000461684 TOPAZ1Q8N9V7 1692 aa23.14■■□□□ 1.29
CHRD-210ENST00000461684 KIAA0232Q92628 1395 aa23.14■■□□□ 1.29
CHRD-210ENST00000461684 CDK19Q9BWU1 502 aa23.13■■□□□ 1.29
CHRD-210ENST00000461684 FAM182BQ5T319 152 aa23.12■■□□□ 1.29
CHRD-210ENST00000461684 SPATA31A1Q5TZJ5 1347 aa23.11■■□□□ 1.29
CHRD-210ENST00000461684 TNS1Q9HBL0 1735 aaKnown RBP23.11■■□□□ 1.29
CHRD-210ENST00000461684 PSDA5PKW4 1024 aaPredicted RBP23.11■■□□□ 1.29
CHRD-210ENST00000461684 EN1Q05925 392 aaPredicted RBP23.11■■□□□ 1.29
CHRD-210ENST00000461684 CHRNA2Q15822 529 aa23.1■■□□□ 1.29
CHRD-210ENST00000461684 CCDC61Q9Y6R9 512 aa23.1■■□□□ 1.29
CHRD-210ENST00000461684 POLR3AO14802 1390 aaPredicted RBP23.1■■□□□ 1.29
CHRD-210ENST00000461684 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
CHRD-210ENST00000461684 STRN4Q9NRL3 753 aa23.09■■□□□ 1.29
CHRD-210ENST00000461684 ACEP12821 1306 aa23.08■■□□□ 1.29
CHRD-210ENST00000461684 DISP2A7MBM2 1401 aa23.08■■□□□ 1.29
CHRD-210ENST00000461684 NBPF8Q3BBV2 869 aa23.08■■□□□ 1.29
CHRD-210ENST00000461684 NUTM2GQ5VZR2 741 aa23.07■■□□□ 1.28
CHRD-210ENST00000461684 PLEKHG3A1L390 1219 aa23.06■■□□□ 1.28
CHRD-210ENST00000461684 FAM196AQ6ZSG2 479 aa23.06■■□□□ 1.28
CHRD-210ENST00000461684 EVA1CP58658 441 aa23.05■■□□□ 1.28
CHRD-210ENST00000461684 ABTB2Q8N961 1025 aa23.04■■□□□ 1.28
CHRD-210ENST00000461684 NRKQ7Z2Y5 1582 aa23.04■■□□□ 1.28
CHRD-210ENST00000461684 SSH2Q76I76 1423 aa23.02■■□□□ 1.28
CHRD-210ENST00000461684 BARGINQ6ZT62 677 aa23.02■■□□□ 1.28
CHRD-210ENST00000461684 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
CHRD-210ENST00000461684 TRIM37O94972 964 aa23.01■■□□□ 1.27
CHRD-210ENST00000461684 EZH2Q15910 746 aaKnown RBP23.01■■□□□ 1.27
CHRD-210ENST00000461684 CAMTA1Q9Y6Y1 1673 aa23■■□□□ 1.27
CHRD-210ENST00000461684 PDE3BQ13370 1112 aa23■■□□□ 1.27
CHRD-210ENST00000461684 R3HDM1Q15032 1099 aaKnown RBP23■■□□□ 1.27
CHRD-210ENST00000461684 NBPF1Q3BBV0 1214 aa23■■□□□ 1.27
CHRD-210ENST00000461684 CPDO75976 1380 aa23■■□□□ 1.27
CHRD-210ENST00000461684 LMO7Q8WWI1 1683 aa23■■□□□ 1.27
CHRD-210ENST00000461684 SRPK2P78362 688 aaKnown RBP22.99■■□□□ 1.27
CHRD-210ENST00000461684 PPIP5K1Q6PFW1 1433 aa22.99■■□□□ 1.27
CHRD-210ENST00000461684 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
CHRD-210ENST00000461684 CAMKK2Q96RR4 588 aa22.98■■□□□ 1.27
CHRD-210ENST00000461684 USP19O94966 1318 aa22.98■■□□□ 1.27
CHRD-210ENST00000461684 PARD3Q8TEW0 1356 aa22.98■■□□□ 1.27
CHRD-210ENST00000461684 APBA3O96018 575 aa22.97■■□□□ 1.27
CHRD-210ENST00000461684 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
CHRD-210ENST00000461684 TCP11L2Q8N4U5 519 aa22.97■■□□□ 1.27
CHRD-210ENST00000461684 CENPJQ9HC77 1338 aaPredicted RBP22.97■■□□□ 1.27
CHRD-210ENST00000461684 QRICH2Q9H0J4 1663 aa22.97■■□□□ 1.27
CHRD-210ENST00000461684 BRD4O60885 1362 aaPredicted RBP22.96■■□□□ 1.27
CHRD-210ENST00000461684 THRAP3Q9Y2W1 955 aaKnown RBP22.95■■□□□ 1.26
CHRD-210ENST00000461684 RREB1Q92766 1687 aa22.94■■□□□ 1.26
CHRD-210ENST00000461684 GCP02774 474 aa22.94■■□□□ 1.26
CHRD-210ENST00000461684 CABP2Q9NPB3 220 aa22.94■■□□□ 1.26
CHRD-210ENST00000461684 PARP4Q9UKK3 1724 aaKnown RBP22.94■■□□□ 1.26
CHRD-210ENST00000461684 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
CHRD-210ENST00000461684 NUP188Q5SRE5 1749 aa22.91■■□□□ 1.26
CHRD-210ENST00000461684 COL5A2P05997 1499 aaPredicted RBP22.91■■□□□ 1.26
CHRD-210ENST00000461684 USP6P35125 1406 aa22.89■■□□□ 1.25
CHRD-210ENST00000461684 C11orf95C9JLR9 678 aaPredicted RBP22.88■■□□□ 1.25
CHRD-210ENST00000461684 NLRP6P59044 892 aa22.88■■□□□ 1.25
CHRD-210ENST00000461684 NBPF14Q5TI25 921 aa22.88■■□□□ 1.25
CHRD-210ENST00000461684 CABP1Q9NZU7 370 aa22.88■■□□□ 1.25
CHRD-210ENST00000461684 CRB1P82279 1406 aa22.88■■□□□ 1.25
CHRD-210ENST00000461684 ZBTB7CA1YPR0 619 aa22.86■■□□□ 1.25
CHRD-210ENST00000461684 SLIT3O75094 1523 aa22.86■■□□□ 1.25
CHRD-210ENST00000461684 SBF2Q86WG5 1849 aa22.85■■□□□ 1.25
CHRD-210ENST00000461684 AATKQ6ZMQ8 1374 aa22.85■■□□□ 1.25
CHRD-210ENST00000461684 PIK3C2AO00443 1686 aa22.84■■□□□ 1.25
CHRD-210ENST00000461684 COL18A1P39060 1754 aa22.84■■□□□ 1.25
CHRD-210ENST00000461684 EVC2Q86UK5 1308 aa22.83■■□□□ 1.25
CHRD-210ENST00000461684 OVOS2A0A0G2JMS6 1433 aa22.82■■□□□ 1.24
CHRD-210ENST00000461684 OVOS2A0A0J9YW53 1432 aa22.82■■□□□ 1.24
CHRD-210ENST00000461684 OVOS2Q6IE36 1432 aa22.82■■□□□ 1.24
CHRD-210ENST00000461684 TRPM1Q7Z4N2 1603 aa22.82■■□□□ 1.24
CHRD-210ENST00000461684 PEAK1Q9H792 1746 aa22.82■■□□□ 1.24
CHRD-210ENST00000461684 WNK3Q9BYP7 1800 aa22.82■■□□□ 1.24
CHRD-210ENST00000461684 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
CHRD-210ENST00000461684 RGPD3A6NKT7 1758 aaPredicted RBP22.81■■□□□ 1.24
CHRD-210ENST00000461684 RGPD4Q7Z3J3 1758 aa22.81■■□□□ 1.24
CHRD-210ENST00000461684 TOM1L2Q6ZVM7 507 aa22.81■■□□□ 1.24
CHRD-210ENST00000461684 L3MBTL2Q969R5 705 aa22.81■■□□□ 1.24
CHRD-210ENST00000461684 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
CHRD-210ENST00000461684 RGPD5Q99666 1765 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms