RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 PCDHGC3Q9UN70 934 aa8.39□□□□□ -1.07
CLK1-206ENST00000461326 WDR4P57081 412 aaKnown RBP8.38□□□□□ -1.07
CLK1-206ENST00000461326 LOC100996750A0A140TA64 210 aa8.37□□□□□ -1.07
CLK1-206ENST00000461326 VSIG8P0DPA2 414 aa8.37□□□□□ -1.07
CLK1-206ENST00000461326 TIMP2P16035 220 aa8.37□□□□□ -1.07
CLK1-206ENST00000461326 KRTAP4-6Q9BYQ5 205 aa8.37□□□□□ -1.07
CLK1-206ENST00000461326 PRKCSHP14314 528 aaPredicted RBP8.36□□□□□ -1.07
CLK1-206ENST00000461326 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
CLK1-206ENST00000461326 FAM174AQ8TBP5 190 aa8.36□□□□□ -1.07
CLK1-206ENST00000461326 SPDYE5A6NIY4 337 aa8.35□□□□□ -1.07
CLK1-206ENST00000461326 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
CLK1-206ENST00000461326 MTMR2Q13614 643 aa8.34□□□□□ -1.07
CLK1-206ENST00000461326 SPIRE2Q8WWL2 714 aa8.34□□□□□ -1.07
CLK1-206ENST00000461326 SOBPA7XYQ1 873 aa8.33□□□□□ -1.08
CLK1-206ENST00000461326 MAN1A2O60476 641 aa8.33□□□□□ -1.08
CLK1-206ENST00000461326 NDUFV2P19404 249 aa8.32□□□□□ -1.08
CLK1-206ENST00000461326 SSTR3P32745 418 aaPredicted RBP8.32□□□□□ -1.08
CLK1-206ENST00000461326 CTHP32929 405 aa8.32□□□□□ -1.08
CLK1-206ENST00000461326 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
CLK1-206ENST00000461326 UPP2O95045 317 aa8.31□□□□□ -1.08
CLK1-206ENST00000461326 KLF16Q9BXK1 252 aaPredicted RBP8.31□□□□□ -1.08
CLK1-206ENST00000461326 ZIC2O95409 532 aaPredicted RBP8.3□□□□□ -1.08
CLK1-206ENST00000461326 KCNMA1Q12791 1236 aa8.3□□□□□ -1.08
CLK1-206ENST00000461326 ARID5BQ14865 1188 aa8.3□□□□□ -1.08
CLK1-206ENST00000461326 CDK15Q96Q40 435 aa8.3□□□□□ -1.08
CLK1-206ENST00000461326 NR5A1Q13285 461 aa8.29□□□□□ -1.08
CLK1-206ENST00000461326 SUZ12Q15022 739 aaKnown RBP8.29□□□□□ -1.08
CLK1-206ENST00000461326 C6orf118Q5T5N4 469 aa8.29□□□□□ -1.08
CLK1-206ENST00000461326 PPFIA3O75145 1194 aa8.28□□□□□ -1.08
CLK1-206ENST00000461326 TTLL12Q14166 644 aaPredicted RBP8.28□□□□□ -1.08
CLK1-206ENST00000461326 BMP2P12643 396 aa8.27□□□□□ -1.09
CLK1-206ENST00000461326 AGERQ15109 404 aa8.27□□□□□ -1.09
CLK1-206ENST00000461326 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
CLK1-206ENST00000461326 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
CLK1-206ENST00000461326 ZFAND3Q9H8U3 227 aa8.27□□□□□ -1.09
CLK1-206ENST00000461326 RNF225M0QZC1 329 aaPredicted RBP8.26□□□□□ -1.09
CLK1-206ENST00000461326 GJA5P36382 358 aa8.26□□□□□ -1.09
CLK1-206ENST00000461326 SPTLC1O15269 473 aa8.25□□□□□ -1.09
CLK1-206ENST00000461326 DIXDC1Q155Q3 683 aa8.25□□□□□ -1.09
CLK1-206ENST00000461326 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
CLK1-206ENST00000461326 KCTD17Q8N5Z5 321 aa8.25□□□□□ -1.09
CLK1-206ENST00000461326 FOXJ1Q92949 421 aa8.25□□□□□ -1.09
CLK1-206ENST00000461326 BPHLQ86WA6 291 aaPredicted RBP8.24□□□□□ -1.09
CLK1-206ENST00000461326 TMEM151AQ8N4L1 468 aa8.24□□□□□ -1.09
CLK1-206ENST00000461326 NR3C2P08235 984 aa8.23□□□□□ -1.09
CLK1-206ENST00000461326 MEIOBQ8N635 442 aa8.23□□□□□ -1.09
CLK1-206ENST00000461326 F12P00748 615 aaPredicted RBP8.22□□□□□ -1.09
CLK1-206ENST00000461326 RSBN1LQ6PCB5 846 aaPredicted RBP8.22□□□□□ -1.09
CLK1-206ENST00000461326 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
CLK1-206ENST00000461326 ZBTB3Q9H5J0 574 aa8.22□□□□□ -1.09
CLK1-206ENST00000461326 MAP10Q9P2G4 905 aa8.22□□□□□ -1.09
CLK1-206ENST00000461326 SOS2Q07890 1332 aaPredicted RBP8.22□□□□□ -1.09
CLK1-206ENST00000461326 GDF11O95390 407 aa8.21□□□□□ -1.1
CLK1-206ENST00000461326 GIGYF2Q6Y7W6 1299 aaKnown RBP8.21□□□□□ -1.1
CLK1-206ENST00000461326 CFAP99D6REC4 459 aa8.2□□□□□ -1.1
CLK1-206ENST00000461326 GRM5P41594 1212 aa8.2□□□□□ -1.1
CLK1-206ENST00000461326 GSK3AP49840 483 aa8.2□□□□□ -1.1
CLK1-206ENST00000461326 AMHR2Q16671 573 aa8.2□□□□□ -1.1
CLK1-206ENST00000461326 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.2□□□□□ -1.12e-6■■□□□ 13.3
CLK1-206ENST00000461326 ARMC2Q8NEN0 867 aa8.2□□□□□ -1.1
CLK1-206ENST00000461326 TSEN34Q9BSV6 310 aaKnown RBP8.2□□□□□ -1.1
CLK1-206ENST00000461326 TBC1D2Q9BYX2 928 aa8.2□□□□□ -1.1
CLK1-206ENST00000461326 DNMT3LQ9UJW3 386 aa8.2□□□□□ -1.1
CLK1-206ENST00000461326 RASSF7Q02833 373 aa8.19□□□□□ -1.1
CLK1-206ENST00000461326 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
CLK1-206ENST00000461326 HRCP23327 699 aa8.18□□□□□ -1.1
CLK1-206ENST00000461326 FSHRP23945 695 aa8.18□□□□□ -1.1
CLK1-206ENST00000461326 PRPF38BQ5VTL8 546 aaKnown RBP8.18□□□□□ -1.1
CLK1-206ENST00000461326 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
CLK1-206ENST00000461326 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
CLK1-206ENST00000461326 EMILIN1Q9Y6C2 1016 aa8.18□□□□□ -1.1
CLK1-206ENST00000461326 NBPF14Q5TI25 921 aa8.17□□□□□ -1.1
CLK1-206ENST00000461326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLK1-206ENST00000461326 VASH1Q7L8A9 365 aaPredicted RBP8.17□□□□□ -1.1
CLK1-206ENST00000461326 ADAMTS8Q9UP79 889 aa8.17□□□□□ -1.1
CLK1-206ENST00000461326 MAP4K5Q9Y4K4 846 aa8.17□□□□□ -1.1
CLK1-206ENST00000461326 PCDHB15Q9Y5E8 787 aa8.17□□□□□ -1.1
CLK1-206ENST00000461326 TTLL8A6PVC2 850 aa8.16□□□□□ -1.1
CLK1-206ENST00000461326 KRT76Q01546 638 aa8.16□□□□□ -1.1
CLK1-206ENST00000461326 PTSQ03393 145 aa8.15□□□□□ -1.1
CLK1-206ENST00000461326 CCDC116Q8IYX3 515 aa8.15□□□□□ -1.1
CLK1-206ENST00000461326 TSC1Q92574 1164 aa8.15□□□□□ -1.1
CLK1-206ENST00000461326 C1QTNF2Q9BXJ5 285 aa8.15□□□□□ -1.1
CLK1-206ENST00000461326 BARGINQ6ZT62 677 aa8.14□□□□□ -1.11
CLK1-206ENST00000461326 RIC3Q7Z5B4 369 aa8.14□□□□□ -1.11
CLK1-206ENST00000461326 TRMT44Q8IYL2 757 aaKnown RBP8.14□□□□□ -1.11
CLK1-206ENST00000461326 SVOPQ8N4V2 548 aa8.14□□□□□ -1.11
CLK1-206ENST00000461326 GPR161Q8N6U8 529 aaKnown RBP8.14□□□□□ -1.11
CLK1-206ENST00000461326 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
CLK1-206ENST00000461326 SH3RF1Q7Z6J0 888 aa8.13□□□□□ -1.11
CLK1-206ENST00000461326 NANOS1Q8WY41 292 aaKnown RBP8.13□□□□□ -1.11
CLK1-206ENST00000461326 PER1O15534 1290 aaPredicted RBP8.12□□□□□ -1.11
CLK1-206ENST00000461326 CSPP1Q1MSJ5 1256 aa8.12□□□□□ -1.11
CLK1-206ENST00000461326 CABLES1Q8TDN4 633 aa8.12□□□□□ -1.11
CLK1-206ENST00000461326 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
CLK1-206ENST00000461326 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
CLK1-206ENST00000461326 NUTM2BA6NNL0 878 aaPredicted RBP8.11□□□□□ -1.11
CLK1-206ENST00000461326 NUTM2EB1AL46 878 aaPredicted RBP8.11□□□□□ -1.11
CLK1-206ENST00000461326 ZMYND10O75800 440 aa8.11□□□□□ -1.11
CLK1-206ENST00000461326 NUTM2DQ5VT03 806 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms