RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SLC10A3P09131 477 aa12.67□□□□□ -0.38
ECHDC1-212ENST00000461239 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
ECHDC1-212ENST00000461239 MAGI3Q5TCQ9 1506 aa12.67□□□□□ -0.38
ECHDC1-212ENST00000461239 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
ECHDC1-212ENST00000461239 RAD21O60216 631 aa12.66□□□□□ -0.38
ECHDC1-212ENST00000461239 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-212ENST00000461239 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
ECHDC1-212ENST00000461239 ERBB3P21860 1342 aa12.65□□□□□ -0.38
ECHDC1-212ENST00000461239 VPS8Q8N3P4 1428 aa12.65□□□□□ -0.38
ECHDC1-212ENST00000461239 EMP3P54852 163 aa12.65□□□□□ -0.38
ECHDC1-212ENST00000461239 MTMR14Q8NCE2 650 aa12.65□□□□□ -0.38
ECHDC1-212ENST00000461239 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-212ENST00000461239 HOXA2O43364 376 aa12.64□□□□□ -0.39
ECHDC1-212ENST00000461239 USP46P62068 366 aa12.64□□□□□ -0.39
ECHDC1-212ENST00000461239 CCDC18Q5T9S5 1454 aa12.64□□□□□ -0.39
ECHDC1-212ENST00000461239 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
ECHDC1-212ENST00000461239 CD109Q6YHK3 1445 aa12.63□□□□□ -0.39
ECHDC1-212ENST00000461239 ABCA9Q8IUA7 1624 aa12.63□□□□□ -0.39
ECHDC1-212ENST00000461239 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
ECHDC1-212ENST00000461239 PRPF38BQ5VTL8 546 aaKnown RBP12.63□□□□□ -0.39
ECHDC1-212ENST00000461239 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
ECHDC1-212ENST00000461239 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
ECHDC1-212ENST00000461239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.62□□□□□ -0.39
ECHDC1-212ENST00000461239 SOCS7O14512 581 aa12.62□□□□□ -0.39
ECHDC1-212ENST00000461239 CCDC82Q8N4S0 544 aa12.62□□□□□ -0.39
ECHDC1-212ENST00000461239 CABLES1Q8TDN4 633 aa12.62□□□□□ -0.39
ECHDC1-212ENST00000461239 HS3ST6Q96QI5 342 aa12.62□□□□□ -0.39
ECHDC1-212ENST00000461239 RSPH4AQ5TD94 716 aa12.61□□□□□ -0.39
ECHDC1-212ENST00000461239 KIF14Q15058 1648 aa12.61□□□□□ -0.39
ECHDC1-212ENST00000461239 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
ECHDC1-212ENST00000461239 COL17A1Q9UMD9 1497 aaPredicted RBP12.6□□□□□ -0.39
ECHDC1-212ENST00000461239 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
ECHDC1-212ENST00000461239 PBX2P40425 430 aa12.6□□□□□ -0.39
ECHDC1-212ENST00000461239 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
ECHDC1-212ENST00000461239 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
ECHDC1-212ENST00000461239 CDK11AQ9UQ88 783 aaPredicted RBP12.6□□□□□ -0.39
ECHDC1-212ENST00000461239 VPS9D1Q9Y2B5 631 aa12.6□□□□□ -0.39
ECHDC1-212ENST00000461239 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
ECHDC1-212ENST00000461239 FDX1P10109 184 aa12.59□□□□□ -0.39
ECHDC1-212ENST00000461239 HRCP23327 699 aa12.59□□□□□ -0.39
ECHDC1-212ENST00000461239 HLA-CQ95604 372 aa12.59□□□□□ -0.39
ECHDC1-212ENST00000461239 PCDHGC3Q9UN70 934 aa12.59□□□□□ -0.39
ECHDC1-212ENST00000461239 ZBTB3Q9H5J0 574 aa12.58□□□□□ -0.4
ECHDC1-212ENST00000461239 NUTM2BA6NNL0 878 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-212ENST00000461239 NUTM2EB1AL46 878 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-212ENST00000461239 AP1G2O75843 785 aa12.57□□□□□ -0.4
ECHDC1-212ENST00000461239 GUCA2AQ02747 115 aa12.57□□□□□ -0.4
ECHDC1-212ENST00000461239 NUTM2DQ5VT03 806 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-212ENST00000461239 NUTM2AQ8IVF1 878 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-212ENST00000461239 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
ECHDC1-212ENST00000461239 KANK4Q5T7N3 995 aaPredicted RBP12.56□□□□□ -0.4
ECHDC1-212ENST00000461239 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
ECHDC1-212ENST00000461239 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
ECHDC1-212ENST00000461239 TEX14Q8IWB6 1497 aa12.55□□□□□ -0.4
ECHDC1-212ENST00000461239 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
ECHDC1-212ENST00000461239 PLCH2O75038 1416 aa12.54□□□□□ -0.4
ECHDC1-212ENST00000461239 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
ECHDC1-212ENST00000461239 LAPTM4BQ86VI4 370 aa12.54□□□□□ -0.4
ECHDC1-212ENST00000461239 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
ECHDC1-212ENST00000461239 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
ECHDC1-212ENST00000461239 HDGFP51858 240 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-212ENST00000461239 SLF2Q8IX21 1173 aa12.53□□□□□ -0.4
ECHDC1-212ENST00000461239 FUT2Q10981 343 aa12.52□□□□□ -0.41
ECHDC1-212ENST00000461239 MTUS2Q5JR59 1369 aa12.52□□□□□ -0.41
ECHDC1-212ENST00000461239 LRRC9Q6ZRR7 1453 aa12.52□□□□□ -0.41
ECHDC1-212ENST00000461239 KDM6BO15054 1643 aa12.51□□□□□ -0.41
ECHDC1-212ENST00000461239 CFHP08603 1231 aa12.51□□□□□ -0.41
ECHDC1-212ENST00000461239 GJD4Q96KN9 370 aaPredicted RBP12.51□□□□□ -0.41
ECHDC1-212ENST00000461239 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
ECHDC1-212ENST00000461239 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
ECHDC1-212ENST00000461239 FANCAO15360 1455 aa12.51□□□□□ -0.41
ECHDC1-212ENST00000461239 NEO1Q92859 1461 aa12.51□□□□□ -0.41
ECHDC1-212ENST00000461239 EHBP1L1Q8N3D4 1523 aa12.51□□□□□ -0.41
ECHDC1-212ENST00000461239 MTMR2Q13614 643 aa12.5□□□□□ -0.41
ECHDC1-212ENST00000461239 NBPF3Q9H094 633 aa12.5□□□□□ -0.41
ECHDC1-212ENST00000461239 AKNAQ7Z591 1439 aa12.5□□□□□ -0.41
ECHDC1-212ENST00000461239 ARAP3Q8WWN8 1544 aa12.5□□□□□ -0.41
ECHDC1-212ENST00000461239 GPATCH8Q9UKJ3 1502 aaKnown RBP12.5□□□□□ -0.41
ECHDC1-212ENST00000461239 SLC4A3P48751 1232 aa12.49□□□□□ -0.41
ECHDC1-212ENST00000461239 CDC42BPBQ9Y5S2 1711 aa12.48□□□□□ -0.41
ECHDC1-212ENST00000461239 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
ECHDC1-212ENST00000461239 TK2O00142 265 aa12.48□□□□□ -0.41
ECHDC1-212ENST00000461239 ZFRQ96KR1 1074 aaKnown RBP12.48□□□□□ -0.41
ECHDC1-212ENST00000461239 MYO5CQ9NQX4 1742 aa12.48□□□□□ -0.41
ECHDC1-212ENST00000461239 NCOA2Q15596 1464 aa12.47□□□□□ -0.41
ECHDC1-212ENST00000461239 RAPGEF3O95398 923 aa12.47□□□□□ -0.41
ECHDC1-212ENST00000461239 ABL2P42684 1182 aa12.47□□□□□ -0.41
ECHDC1-212ENST00000461239 CTDSPL2Q05D32 466 aa12.47□□□□□ -0.41
ECHDC1-212ENST00000461239 HMX1Q9NP08 348 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-212ENST00000461239 SERPINA10Q9UK55 444 aa12.47□□□□□ -0.41
ECHDC1-212ENST00000461239 CDC42BPAQ5VT25 1732 aa12.47□□□□□ -0.41
ECHDC1-212ENST00000461239 PREX2Q70Z35 1606 aa12.47□□□□□ -0.41
ECHDC1-212ENST00000461239 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
ECHDC1-212ENST00000461239 EFCAB2Q5VUJ9 269 aa12.46□□□□□ -0.41
ECHDC1-212ENST00000461239 PRM3Q9NNZ6 103 aa12.46□□□□□ -0.41
ECHDC1-212ENST00000461239 FRMPD1Q5SYB0 1578 aa12.46□□□□□ -0.42
ECHDC1-212ENST00000461239 CFAP99D6REC4 459 aa12.45□□□□□ -0.42
ECHDC1-212ENST00000461239 ATP6V1AP38606 617 aa12.45□□□□□ -0.42
ECHDC1-212ENST00000461239 CCDC97Q96F63 343 aaPredicted RBP12.45□□□□□ -0.42
ECHDC1-212ENST00000461239 ARHGAP5Q13017 1502 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms