RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-208ENST00000461071 DCAF11Q8TEB1 546 aa25.53■■□□□ 1.68
SLC39A1-208ENST00000461071 HRCP23327 699 aa25.52■■□□□ 1.68
SLC39A1-208ENST00000461071 BTG4Q9NY30 223 aa25.52■■□□□ 1.68
SLC39A1-208ENST00000461071 LRP5O75197 1615 aa25.52■■□□□ 1.68
SLC39A1-208ENST00000461071 RGPD1P0DJD0 1748 aa25.51■■□□□ 1.67
SLC39A1-208ENST00000461071 THSD7AQ9UPZ6 1657 aa25.5■■□□□ 1.67
SLC39A1-208ENST00000461071 KDM2AQ9Y2K7 1162 aa25.5■■□□□ 1.67
SLC39A1-208ENST00000461071 KIAA1210Q9ULL0 1709 aa25.49■■□□□ 1.67
SLC39A1-208ENST00000461071 ATP7BP35670 1465 aa25.48■■□□□ 1.67
SLC39A1-208ENST00000461071 SPATA31A5Q5VU36 1347 aa25.47■■□□□ 1.67
SLC39A1-208ENST00000461071 SPATA31A7Q8IWB4 1347 aa25.47■■□□□ 1.67
SLC39A1-208ENST00000461071 FAM98CQ17RN3 349 aaKnown RBP25.47■■□□□ 1.67
SLC39A1-208ENST00000461071 TOPAZ1Q8N9V7 1692 aa25.46■■□□□ 1.67
SLC39A1-208ENST00000461071 PHRF1Q9P1Y6 1649 aaKnown RBP25.46■■□□□ 1.67
SLC39A1-208ENST00000461071 NGDNQ8NEJ9 315 aaKnown RBP25.46■■□□□ 1.67
SLC39A1-208ENST00000461071 TNS1Q9HBL0 1735 aaKnown RBP25.43■■□□□ 1.66
SLC39A1-208ENST00000461071 NUDT16Q96DE0 195 aaKnown RBP25.43■■□□□ 1.66
SLC39A1-208ENST00000461071 BAG6P46379 1132 aa25.42■■□□□ 1.66
SLC39A1-208ENST00000461071 A0A0G2JS52 829 aa25.41■■□□□ 1.66
SLC39A1-208ENST00000461071 PAK3O75914 559 aaPredicted RBP25.41■■□□□ 1.66
SLC39A1-208ENST00000461071 MYT1Q01538 1121 aa25.41■■□□□ 1.66
SLC39A1-208ENST00000461071 PRDM11Q9NQV5 511 aa25.41■■□□□ 1.66
SLC39A1-208ENST00000461071 POLR3AO14802 1390 aaPredicted RBP25.4■■□□□ 1.66
SLC39A1-208ENST00000461071 DISP2A7MBM2 1401 aa25.39■■□□□ 1.66
SLC39A1-208ENST00000461071 KIAA0232Q92628 1395 aa25.37■■□□□ 1.65
SLC39A1-208ENST00000461071 SPATA31A1Q5TZJ5 1347 aa25.37■■□□□ 1.65
SLC39A1-208ENST00000461071 CDK19Q9BWU1 502 aa25.36■■□□□ 1.65
SLC39A1-208ENST00000461071 PLEKHG3A1L390 1219 aa25.34■■□□□ 1.65
SLC39A1-208ENST00000461071 CCDC61Q9Y6R9 512 aa25.34■■□□□ 1.65
SLC39A1-208ENST00000461071 NRKQ7Z2Y5 1582 aa25.32■■□□□ 1.64
SLC39A1-208ENST00000461071 NBPF8Q3BBV2 869 aa25.32■■□□□ 1.64
SLC39A1-208ENST00000461071 LMO7Q8WWI1 1683 aa25.32■■□□□ 1.64
SLC39A1-208ENST00000461071 ACEP12821 1306 aa25.32■■□□□ 1.64
SLC39A1-208ENST00000461071 FAM182BQ5T319 152 aa25.31■■□□□ 1.64
SLC39A1-208ENST00000461071 EN1Q05925 392 aaPredicted RBP25.3■■□□□ 1.64
SLC39A1-208ENST00000461071 CPDO75976 1380 aa25.3■■□□□ 1.64
SLC39A1-208ENST00000461071 CHRNA2Q15822 529 aa25.29■■□□□ 1.64
SLC39A1-208ENST00000461071 PSDA5PKW4 1024 aaPredicted RBP25.28■■□□□ 1.64
SLC39A1-208ENST00000461071 FAM196AQ6ZSG2 479 aa25.28■■□□□ 1.64
SLC39A1-208ENST00000461071 CAMTA1Q9Y6Y1 1673 aa25.28■■□□□ 1.64
SLC39A1-208ENST00000461071 BARGINQ6ZT62 677 aa25.27■■□□□ 1.64
SLC39A1-208ENST00000461071 USP19O94966 1318 aa25.27■■□□□ 1.64
SLC39A1-208ENST00000461071 SSH2Q76I76 1423 aa25.27■■□□□ 1.64
SLC39A1-208ENST00000461071 ZC3H6P61129 1189 aaKnown RBP25.26■■□□□ 1.63
SLC39A1-208ENST00000461071 STRN4Q9NRL3 753 aa25.26■■□□□ 1.63
SLC39A1-208ENST00000461071 PARD3Q8TEW0 1356 aa25.25■■□□□ 1.63
SLC39A1-208ENST00000461071 RREB1Q92766 1687 aa25.24■■□□□ 1.63
SLC39A1-208ENST00000461071 BRD4O60885 1362 aaPredicted RBP25.24■■□□□ 1.63
SLC39A1-208ENST00000461071 NUTM2GQ5VZR2 741 aa25.24■■□□□ 1.63
SLC39A1-208ENST00000461071 CAMKK2Q96RR4 588 aa25.24■■□□□ 1.63
SLC39A1-208ENST00000461071 QRICH2Q9H0J4 1663 aa25.23■■□□□ 1.63
SLC39A1-208ENST00000461071 NBPF1Q3BBV0 1214 aa25.23■■□□□ 1.63
SLC39A1-208ENST00000461071 ABTB2Q8N961 1025 aa25.23■■□□□ 1.63
SLC39A1-208ENST00000461071 PARP4Q9UKK3 1724 aaKnown RBP25.23■■□□□ 1.63
SLC39A1-208ENST00000461071 EVA1CP58658 441 aa25.21■■□□□ 1.63
SLC39A1-208ENST00000461071 TRIM37O94972 964 aa25.2■■□□□ 1.62
SLC39A1-208ENST00000461071 EZH2Q15910 746 aaKnown RBP25.2■■□□□ 1.62
SLC39A1-208ENST00000461071 PPIP5K1Q6PFW1 1433 aa25.2■■□□□ 1.62
SLC39A1-208ENST00000461071 CENPJQ9HC77 1338 aaPredicted RBP25.19■■□□□ 1.62
SLC39A1-208ENST00000461071 R3HDM1Q15032 1099 aaKnown RBP25.19■■□□□ 1.62
SLC39A1-208ENST00000461071 NLRP13Q86W25 1043 aa25.19■■□□□ 1.62
SLC39A1-208ENST00000461071 NUP188Q5SRE5 1749 aa25.19■■□□□ 1.62
SLC39A1-208ENST00000461071 LARP1Q6PKG0 1096 aaKnown RBP25.18■■□□□ 1.62
SLC39A1-208ENST00000461071 TCP11L2Q8N4U5 519 aa25.18■■□□□ 1.62
SLC39A1-208ENST00000461071 THRAP3Q9Y2W1 955 aaKnown RBP25.18■■□□□ 1.62
SLC39A1-208ENST00000461071 GCP02774 474 aa25.17■■□□□ 1.62
SLC39A1-208ENST00000461071 USP35Q9P2H5 1018 aa25.17■■□□□ 1.62
SLC39A1-208ENST00000461071 SBF2Q86WG5 1849 aa25.16■■□□□ 1.62
SLC39A1-208ENST00000461071 COL5A2P05997 1499 aaPredicted RBP25.16■■□□□ 1.62
SLC39A1-208ENST00000461071 PDE3BQ13370 1112 aa25.16■■□□□ 1.62
SLC39A1-208ENST00000461071 APBA3O96018 575 aa25.15■■□□□ 1.62
SLC39A1-208ENST00000461071 SRPK2P78362 688 aaKnown RBP25.15■■□□□ 1.62
SLC39A1-208ENST00000461071 COL18A1P39060 1754 aa25.14■■□□□ 1.62
SLC39A1-208ENST00000461071 SLIT3O75094 1523 aa25.14■■□□□ 1.62
SLC39A1-208ENST00000461071 PEAK1Q9H792 1746 aa25.14■■□□□ 1.61
SLC39A1-208ENST00000461071 RGPD3A6NKT7 1758 aaPredicted RBP25.13■■□□□ 1.61
SLC39A1-208ENST00000461071 RGPD4Q7Z3J3 1758 aa25.13■■□□□ 1.61
SLC39A1-208ENST00000461071 USP6P35125 1406 aa25.13■■□□□ 1.61
SLC39A1-208ENST00000461071 C11orf95C9JLR9 678 aaPredicted RBP25.12■■□□□ 1.61
SLC39A1-208ENST00000461071 CABP2Q9NPB3 220 aa25.12■■□□□ 1.61
SLC39A1-208ENST00000461071 PIK3C2AO00443 1686 aa25.11■■□□□ 1.61
SLC39A1-208ENST00000461071 AATKQ6ZMQ8 1374 aa25.11■■□□□ 1.61
SLC39A1-208ENST00000461071 WNK3Q9BYP7 1800 aa25.11■■□□□ 1.61
SLC39A1-208ENST00000461071 CRB1P82279 1406 aa25.11■■□□□ 1.61
SLC39A1-208ENST00000461071 TRPM1Q7Z4N2 1603 aa25.09■■□□□ 1.61
SLC39A1-208ENST00000461071 AKAP12Q02952 1782 aa25.09■■□□□ 1.61
SLC39A1-208ENST00000461071 CABP1Q9NZU7 370 aa25.08■■□□□ 1.61
SLC39A1-208ENST00000461071 RGPD5Q99666 1765 aa25.08■■□□□ 1.6
SLC39A1-208ENST00000461071 LRRC37A3O60309 1634 aa25.07■■□□□ 1.6
SLC39A1-208ENST00000461071 NLRP6P59044 892 aa25.06■■□□□ 1.6
SLC39A1-208ENST00000461071 OVOS2A0A0G2JMS6 1433 aa25.03■■□□□ 1.6
SLC39A1-208ENST00000461071 OVOS2A0A0J9YW53 1432 aa25.03■■□□□ 1.6
SLC39A1-208ENST00000461071 OVOS2Q6IE36 1432 aa25.03■■□□□ 1.6
SLC39A1-208ENST00000461071 NBPF14Q5TI25 921 aa25.03■■□□□ 1.6
SLC39A1-208ENST00000461071 L3MBTL2Q969R5 705 aa25.03■■□□□ 1.6
SLC39A1-208ENST00000461071 EVC2Q86UK5 1308 aa25.03■■□□□ 1.6
SLC39A1-208ENST00000461071 CPSF1Q10570 1443 aaKnown RBP24.99■■□□□ 1.59
SLC39A1-208ENST00000461071 ZNF692Q9BU19 519 aaPredicted RBP24.99■■□□□ 1.59
SLC39A1-208ENST00000461071 BCL9O00512 1426 aa24.98■■□□□ 1.59
SLC39A1-208ENST00000461071 WDR17Q8IZU2 1322 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms