RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 FECHP22830 423 aa7.77□□□□□ -1.17
CNN3-204ENST00000461018 UHRF1BP1Q6BDS2 1440 aa7.77□□□□□ -1.17
CNN3-204ENST00000461018 POGZQ7Z3K3 1410 aa7.77□□□□□ -1.17
CNN3-204ENST00000461018 FANCAO15360 1455 aa7.76□□□□□ -1.17
CNN3-204ENST00000461018 NEO1Q92859 1461 aa7.76□□□□□ -1.17
CNN3-204ENST00000461018 RICTORQ6R327 1708 aa7.76□□□□□ -1.17
CNN3-204ENST00000461018 ABCA9Q8IUA7 1624 aa7.76□□□□□ -1.17
CNN3-204ENST00000461018 ATP10BO94823 1461 aa7.75□□□□□ -1.17
CNN3-204ENST00000461018 ARHGEF12Q9NZN5 1544 aa7.75□□□□□ -1.17
CNN3-204ENST00000461018 RCCD1A6NED2 376 aa7.75□□□□□ -1.17
CNN3-204ENST00000461018 POTEAQ6S8J7 498 aa7.75□□□□□ -1.17
CNN3-204ENST00000461018 ANKLE1Q8NAG6 615 aa7.75□□□□□ -1.17
CNN3-204ENST00000461018 NCOA1Q15788 1441 aa7.75□□□□□ -1.17
CNN3-204ENST00000461018 AKNAQ7Z591 1439 aa7.75□□□□□ -1.17
CNN3-204ENST00000461018 SETD1BQ9UPS6 1966 aaKnown RBP7.75□□□□□ -1.17
CNN3-204ENST00000461018 POTECB2RU33 542 aa7.74□□□□□ -1.17
CNN3-204ENST00000461018 DNAJB2P25686 324 aa7.74□□□□□ -1.17
CNN3-204ENST00000461018 BLOC1S3Q6QNY0 202 aa7.74□□□□□ -1.17
CNN3-204ENST00000461018 EMID1Q96A84 441 aaPredicted RBP7.74□□□□□ -1.17
CNN3-204ENST00000461018 FHOD3Q2V2M9 1422 aa7.74□□□□□ -1.17
CNN3-204ENST00000461018 KIF27Q86VH2 1401 aa7.74□□□□□ -1.17
CNN3-204ENST00000461018 DENND4BO75064 1496 aaPredicted RBP7.74□□□□□ -1.17
CNN3-204ENST00000461018 FAM187AA6NFU0 413 aa7.73□□□□□ -1.17
CNN3-204ENST00000461018 GPR37O15354 613 aa7.73□□□□□ -1.17
CNN3-204ENST00000461018 OATP04181 439 aa7.73□□□□□ -1.17
CNN3-204ENST00000461018 ZNF697Q5TEC3 545 aa7.73□□□□□ -1.17
CNN3-204ENST00000461018 ZFYVE16Q7Z3T8 1539 aa7.73□□□□□ -1.17
CNN3-204ENST00000461018 TREML4Q6UXN2 200 aa7.72□□□□□ -1.17
CNN3-204ENST00000461018 NLRP7Q8WX94 980 aa7.71□□□□□ -1.18
CNN3-204ENST00000461018 HECW1Q76N89 1606 aa7.7□□□□□ -1.18
CNN3-204ENST00000461018 GDF9O60383 454 aa7.7□□□□□ -1.18
CNN3-204ENST00000461018 LIAT1Q6ZQX7 453 aa7.7□□□□□ -1.18
CNN3-204ENST00000461018 METTL3Q86U44 580 aaKnown RBP7.7□□□□□ -1.18
CNN3-204ENST00000461018 PXYLP1Q8TE99 480 aa7.7□□□□□ -1.18
CNN3-204ENST00000461018 TMEM134Q9H6X4 195 aa7.7□□□□□ -1.18
CNN3-204ENST00000461018 ALKQ9UM73 1620 aa7.7□□□□□ -1.18
CNN3-204ENST00000461018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.69□□□□□ -1.18
CNN3-204ENST00000461018 TNFRSF10AO00220 468 aa7.69□□□□□ -1.18
CNN3-204ENST00000461018 PPEF1O14829 653 aaPredicted RBP7.69□□□□□ -1.18
CNN3-204ENST00000461018 TLL1O43897 1013 aa7.69□□□□□ -1.18
CNN3-204ENST00000461018 S1PR4O95977 384 aa7.69□□□□□ -1.18
CNN3-204ENST00000461018 KMT5BQ4FZB7 885 aa7.69□□□□□ -1.18
CNN3-204ENST00000461018 LMOD2Q6P5Q4 547 aa7.69□□□□□ -1.18
CNN3-204ENST00000461018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.69□□□□□ -1.18
CNN3-204ENST00000461018 CAMSAP1Q5T5Y3 1602 aa7.69□□□□□ -1.18
CNN3-204ENST00000461018 SETD1AO15047 1707 aaKnown RBP7.69□□□□□ -1.18
CNN3-204ENST00000461018 ZMYM4Q5VZL5 1548 aa7.68□□□□□ -1.18
CNN3-204ENST00000461018 C3P01024 1663 aa7.68□□□□□ -1.18
CNN3-204ENST00000461018 AAASQ9NRG9 546 aa7.68□□□□□ -1.18
CNN3-204ENST00000461018 ATP10AO60312 1499 aa7.68□□□□□ -1.18
CNN3-204ENST00000461018 ACTN4O43707 911 aaKnown RBP7.67□□□□□ -1.18
CNN3-204ENST00000461018 TOM1O60784 492 aa7.67□□□□□ -1.18
CNN3-204ENST00000461018 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
CNN3-204ENST00000461018 EFCAB5A4FU69 1503 aa7.67□□□□□ -1.18
CNN3-204ENST00000461018 SUPT5HO00267 1087 aaKnown RBP7.66□□□□□ -1.18
CNN3-204ENST00000461018 ADH1BP00325 375 aa7.66□□□□□ -1.18
CNN3-204ENST00000461018 TRAPPC8Q9Y2L5 1435 aa7.66□□□□□ -1.18
CNN3-204ENST00000461018 ST8SIA5O15466 376 aa7.65□□□□□ -1.18
CNN3-204ENST00000461018 CFHP08603 1231 aa7.65□□□□□ -1.18
CNN3-204ENST00000461018 KRI1Q8N9T8 703 aaKnown RBP7.65□□□□□ -1.18
CNN3-204ENST00000461018 RDH13Q8NBN7 331 aa7.65□□□□□ -1.18
CNN3-204ENST00000461018 SRCAPQ6ZRS2 3230 aa7.65□□□□□ -1.19
CNN3-204ENST00000461018 MAGI2Q86UL8 1455 aa7.64□□□□□ -1.19
CNN3-204ENST00000461018 C9orf84Q5VXU9 1444 aa7.64□□□□□ -1.19
CNN3-204ENST00000461018 SCAPERQ9BY12 1400 aa7.64□□□□□ -1.19
CNN3-204ENST00000461018 DDX11L8A8MPP1 907 aa7.64□□□□□ -1.19
CNN3-204ENST00000461018 NR1I2O75469 434 aa7.64□□□□□ -1.19
CNN3-204ENST00000461018 SLC10A3P09131 477 aa7.64□□□□□ -1.19
CNN3-204ENST00000461018 RSPH4AQ5TD94 716 aa7.64□□□□□ -1.19
CNN3-204ENST00000461018 PHOX2BQ99453 314 aa7.64□□□□□ -1.19
CNN3-204ENST00000461018 RAPGEF2Q9Y4G8 1499 aa7.63□□□□□ -1.19
CNN3-204ENST00000461018 SLC24A1O60721 1099 aa7.63□□□□□ -1.19
CNN3-204ENST00000461018 MAP2K5Q13163 448 aa7.63□□□□□ -1.19
CNN3-204ENST00000461018 SLC6A16Q9GZN6 736 aa7.63□□□□□ -1.19
CNN3-204ENST00000461018 IRF6O14896 467 aa7.62□□□□□ -1.19
CNN3-204ENST00000461018 DAXXQ9UER7 740 aaPredicted RBP7.62□□□□□ -1.19
CNN3-204ENST00000461018 WFS1O76024 890 aa7.61□□□□□ -1.19
CNN3-204ENST00000461018 CRIPAKQ8N1N5 446 aa7.61□□□□□ -1.19
CNN3-204ENST00000461018 AFAP1Q8N556 730 aa7.61□□□□□ -1.19
CNN3-204ENST00000461018 MINK1Q8N4C8 1332 aaPredicted RBP7.6□□□□□ -1.19
CNN3-204ENST00000461018 FOXC1Q12948 553 aa7.6□□□□□ -1.19
CNN3-204ENST00000461018 PLA2G2CQ5R387 149 aa7.6□□□□□ -1.19
CNN3-204ENST00000461018 CCDC102AQ96A19 550 aa7.6□□□□□ -1.19
CNN3-204ENST00000461018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.6□□□□□ -1.19
CNN3-204ENST00000461018 GOLGA3Q08378 1498 aa7.6□□□□□ -1.19
CNN3-204ENST00000461018 TCOF1Q13428 1488 aaKnown RBP7.6□□□□□ -1.19
CNN3-204ENST00000461018 MDM2Q00987 491 aaPredicted RBP7.59□□□□□ -1.19
CNN3-204ENST00000461018 PUS10Q3MIT2 529 aaKnown RBP7.59□□□□□ -1.19
CNN3-204ENST00000461018 ZC3H15Q8WU90 426 aaKnown RBP7.59□□□□□ -1.19
CNN3-204ENST00000461018 PKD2L1Q9P0L9 805 aa7.59□□□□□ -1.19
CNN3-204ENST00000461018 STK17AQ9UEE5 414 aa7.59□□□□□ -1.19
CNN3-204ENST00000461018 SHANK2Q9UPX8 1470 aa7.58□□□□□ -1.2
CNN3-204ENST00000461018 C11orf95C9JLR9 678 aaPredicted RBP7.58□□□□□ -1.2
CNN3-204ENST00000461018 SULF1Q8IWU6 871 aa7.58□□□□□ -1.2
CNN3-204ENST00000461018 NUP153P49790 1475 aaKnown RBP7.57□□□□□ -1.2
CNN3-204ENST00000461018 PLEKHD1A6NEE1 506 aa7.57□□□□□ -1.2
CNN3-204ENST00000461018 AXIN1O15169 862 aa7.57□□□□□ -1.2
CNN3-204ENST00000461018 AVPP01185 164 aa7.57□□□□□ -1.2
CNN3-204ENST00000461018 RPIAP49247 311 aa7.57□□□□□ -1.2
CNN3-204ENST00000461018 INSM1Q01101 510 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms