RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTPN18-206ENST00000460992 POLR3AO14802 1390 aaPredicted RBP10.6□□□□□ -0.71
PTPN18-206ENST00000460992 EVC2Q86UK5 1308 aa10.59□□□□□ -0.71
PTPN18-206ENST00000460992 NUDT16Q96DE0 195 aaKnown RBP10.59□□□□□ -0.71
PTPN18-206ENST00000460992 ATAD2Q6PL18 1390 aa10.59□□□□□ -0.71
PTPN18-206ENST00000460992 CD163L1Q9NR16 1453 aa10.59□□□□□ -0.71
PTPN18-206ENST00000460992 USP54Q70EL1 1684 aa10.59□□□□□ -0.71
PTPN18-206ENST00000460992 NRAPQ86VF7 1730 aa10.58□□□□□ -0.72
PTPN18-206ENST00000460992 SBNO1A3KN83 1393 aa10.58□□□□□ -0.72
PTPN18-206ENST00000460992 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
PTPN18-206ENST00000460992 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.58□□□□□ -0.72
PTPN18-206ENST00000460992 USP6P35125 1406 aa10.58□□□□□ -0.72
PTPN18-206ENST00000460992 SPATA31A6Q5VVP1 1343 aa10.58□□□□□ -0.72
PTPN18-206ENST00000460992 ST20-MTHFSA0A0A6YYL1 179 aa10.57□□□□□ -0.72
PTPN18-206ENST00000460992 TESK2Q96S53 571 aa10.57□□□□□ -0.72
PTPN18-206ENST00000460992 SPATA31A3Q5VYP0 1347 aa10.57□□□□□ -0.72
PTPN18-206ENST00000460992 NWD2Q9ULI1 1742 aa10.55□□□□□ -0.72
PTPN18-206ENST00000460992 ARHGEF10O15013 1369 aa10.55□□□□□ -0.72
PTPN18-206ENST00000460992 SLIT3O75094 1523 aa10.55□□□□□ -0.72
PTPN18-206ENST00000460992 NUTM2BA6NNL0 878 aaPredicted RBP10.55□□□□□ -0.72
PTPN18-206ENST00000460992 NUTM2EB1AL46 878 aaPredicted RBP10.55□□□□□ -0.72
PTPN18-206ENST00000460992 NUTM2AQ8IVF1 878 aaPredicted RBP10.55□□□□□ -0.72
PTPN18-206ENST00000460992 NGDNQ8NEJ9 315 aaKnown RBP10.55□□□□□ -0.72
PTPN18-206ENST00000460992 LRRC59Q96AG4 307 aaKnown RBP10.55□□□□□ -0.72
PTPN18-206ENST00000460992 CCDC61Q9Y6R9 512 aa10.55□□□□□ -0.72
PTPN18-206ENST00000460992 ACEP12821 1306 aa10.55□□□□□ -0.72
PTPN18-206ENST00000460992 A0A1W2PP64 1363 aa10.54□□□□□ -0.72
PTPN18-206ENST00000460992 KRT28Q7Z3Y7 464 aa10.54□□□□□ -0.72
PTPN18-206ENST00000460992 TSHZ2Q9NRE2 1034 aa10.54□□□□□ -0.72
PTPN18-206ENST00000460992 COL14A1Q05707 1796 aaKnown RBP10.54□□□□□ -0.72
PTPN18-206ENST00000460992 CPSF1Q10570 1443 aaKnown RBP10.53□□□□□ -0.72
PTPN18-206ENST00000460992 SSH2Q76I76 1423 aa10.53□□□□□ -0.72
PTPN18-206ENST00000460992 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
PTPN18-206ENST00000460992 FKBP8Q14318 412 aa10.53□□□□□ -0.72
PTPN18-206ENST00000460992 LTN1O94822 1766 aa10.52□□□□□ -0.72
PTPN18-206ENST00000460992 PLEKHG3A1L390 1219 aa10.52□□□□□ -0.73
PTPN18-206ENST00000460992 PSME1Q06323 249 aa10.52□□□□□ -0.73
PTPN18-206ENST00000460992 MEX3CQ5U5Q3 659 aaKnown RBP10.52□□□□□ -0.73
PTPN18-206ENST00000460992 LMOD2Q6P5Q4 547 aa10.52□□□□□ -0.73
PTPN18-206ENST00000460992 LMO7Q8WWI1 1683 aa10.52□□□□□ -0.73
PTPN18-206ENST00000460992 ANKRD26Q9UPS8 1709 aa10.52□□□□□ -0.73
PTPN18-206ENST00000460992 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
PTPN18-206ENST00000460992 ADAMTS2O95450 1211 aa10.51□□□□□ -0.73
PTPN18-206ENST00000460992 HSPA5P11021 654 aaKnown RBP10.51□□□□□ -0.73
PTPN18-206ENST00000460992 CABP1Q9NZU7 370 aa10.51□□□□□ -0.73
PTPN18-206ENST00000460992 NFAT5O94916 1531 aa10.51□□□□□ -0.73
PTPN18-206ENST00000460992 WNK3Q9BYP7 1800 aa10.5□□□□□ -0.73
PTPN18-206ENST00000460992 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
PTPN18-206ENST00000460992 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
PTPN18-206ENST00000460992 C8orf37Q96NL8 207 aa10.5□□□□□ -0.73
PTPN18-206ENST00000460992 KTN1Q86UP2 1357 aaKnown RBP10.5□□□□□ -0.73
PTPN18-206ENST00000460992 ANKRD36BQ8N2N9 1353 aa10.5□□□□□ -0.73
PTPN18-206ENST00000460992 EDC4Q6P2E9 1401 aaKnown RBP10.5□□□□□ -0.73
PTPN18-206ENST00000460992 SLIT2O94813 1529 aa10.49□□□□□ -0.73
PTPN18-206ENST00000460992 TMF1P82094 1093 aa10.49□□□□□ -0.73
PTPN18-206ENST00000460992 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
PTPN18-206ENST00000460992 CCDC7Q96M83 1385 aa10.49□□□□□ -0.73
PTPN18-206ENST00000460992 OVOS2A0A0J9YW53 1432 aa10.49□□□□□ -0.73
PTPN18-206ENST00000460992 OVOS2Q6IE36 1432 aa10.49□□□□□ -0.73
PTPN18-206ENST00000460992 GLI3P10071 1580 aa10.48□□□□□ -0.73
PTPN18-206ENST00000460992 NUTM2GQ5VZR2 741 aa10.48□□□□□ -0.73
PTPN18-206ENST00000460992 RGS17Q9UGC6 210 aaPredicted RBP10.48□□□□□ -0.73
PTPN18-206ENST00000460992 USP19O94966 1318 aa10.48□□□□□ -0.73
PTPN18-206ENST00000460992 AFF2P51816 1311 aa10.48□□□□□ -0.73
PTPN18-206ENST00000460992 WASHC2AQ641Q2 1341 aa10.48□□□□□ -0.73
PTPN18-206ENST00000460992 BRD4O60885 1362 aaPredicted RBP10.48□□□□□ -0.73
PTPN18-206ENST00000460992 RGPD5Q99666 1765 aa10.47□□□□□ -0.73
PTPN18-206ENST00000460992 HAP1P54257 671 aaPredicted RBP10.47□□□□□ -0.73
PTPN18-206ENST00000460992 NSD3Q9BZ95 1437 aa10.47□□□□□ -0.73
PTPN18-206ENST00000460992 COL18A1P39060 1754 aa10.47□□□□□ -0.73
PTPN18-206ENST00000460992 SLC12A5Q9H2X9 1139 aa10.46□□□□□ -0.73
PTPN18-206ENST00000460992 TTC21BQ7Z4L5 1316 aa10.46□□□□□ -0.73
PTPN18-206ENST00000460992 BCL9LQ86UU0 1499 aa10.46□□□□□ -0.74
PTPN18-206ENST00000460992 ABCC6O95255 1503 aa10.45□□□□□ -0.74
PTPN18-206ENST00000460992 RGS12O14924 1447 aa10.45□□□□□ -0.74
PTPN18-206ENST00000460992 ATRNO75882 1429 aa10.45□□□□□ -0.74
PTPN18-206ENST00000460992 KIAA0232Q92628 1395 aa10.45□□□□□ -0.74
PTPN18-206ENST00000460992 ZBED9Q6R2W3 1325 aa10.45□□□□□ -0.74
PTPN18-206ENST00000460992 POLR3GLQ9BT43 218 aa10.45□□□□□ -0.74
PTPN18-206ENST00000460992 ANP32EQ9BTT0 268 aa10.45□□□□□ -0.74
PTPN18-206ENST00000460992 TTC21AQ8NDW8 1320 aa10.44□□□□□ -0.74
PTPN18-206ENST00000460992 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
PTPN18-206ENST00000460992 POTEAQ6S8J7 498 aa10.44□□□□□ -0.74
PTPN18-206ENST00000460992 ILDR2Q71H61 639 aa10.44□□□□□ -0.74
PTPN18-206ENST00000460992 HDGFL2Q7Z4V5 671 aaPredicted RBP10.44□□□□□ -0.74
PTPN18-206ENST00000460992 ABTB2Q8N961 1025 aa10.44□□□□□ -0.74
PTPN18-206ENST00000460992 PUS7Q96PZ0 661 aaKnown RBP10.44□□□□□ -0.74
PTPN18-206ENST00000460992 PRKRIP1Q9H875 184 aaPredicted RBP10.44□□□□□ -0.74
PTPN18-206ENST00000460992 NME9Q86XW9 330 aa10.43□□□□□ -0.74
PTPN18-206ENST00000460992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.43□□□□□ -0.74
PTPN18-206ENST00000460992 PEAK1Q9H792 1746 aa10.43□□□□□ -0.74
PTPN18-206ENST00000460992 THSD7AQ9UPZ6 1657 aa10.43□□□□□ -0.74
PTPN18-206ENST00000460992 CAMTA1Q9Y6Y1 1673 aa10.43□□□□□ -0.74
PTPN18-206ENST00000460992 COL5A2P05997 1499 aaPredicted RBP10.42□□□□□ -0.74
PTPN18-206ENST00000460992 BRWD3Q6RI45 1802 aa10.42□□□□□ -0.74
PTPN18-206ENST00000460992 CPDO75976 1380 aa10.42□□□□□ -0.74
PTPN18-206ENST00000460992 USP31Q70CQ4 1352 aa10.42□□□□□ -0.74
PTPN18-206ENST00000460992 KIF7Q2M1P5 1343 aa10.42□□□□□ -0.74
PTPN18-206ENST00000460992 FAM208AQ9UK61 1670 aaKnown RBP10.42□□□□□ -0.74
PTPN18-206ENST00000460992 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms