RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 C19orf44Q9H6X5 657 aa14.66□□□□□ -0.06
UPK1B-202ENST00000460625 TTC21BQ7Z4L5 1316 aa14.65□□□□□ -0.06
UPK1B-202ENST00000460625 CENPBP07199 599 aaPredicted RBP14.65□□□□□ -0.06
UPK1B-202ENST00000460625 FBLN1P23142 703 aa14.64□□□□□ -0.07
UPK1B-202ENST00000460625 PHF8Q9UPP1 1060 aa14.64□□□□□ -0.07
UPK1B-202ENST00000460625 LRRC7Q96NW7 1537 aa14.64□□□□□ -0.07
UPK1B-202ENST00000460625 MTHFSP49914 203 aa14.64□□□□□ -0.07
UPK1B-202ENST00000460625 ESCO1Q5FWF5 840 aa14.64□□□□□ -0.07
UPK1B-202ENST00000460625 ORAI2Q96SN7 254 aa14.64□□□□□ -0.07
UPK1B-202ENST00000460625 NCOA3Q9Y6Q9 1424 aa14.63□□□□□ -0.07
UPK1B-202ENST00000460625 SENP3-EIF4A1A0A087X0R7 540 aa14.63□□□□□ -0.07
UPK1B-202ENST00000460625 C1orf167Q5SNV9 1468 aa14.62□□□□□ -0.07
UPK1B-202ENST00000460625 MST1RQ04912 1400 aa14.61□□□□□ -0.07
UPK1B-202ENST00000460625 ATF3P18847 181 aa14.6□□□□□ -0.07
UPK1B-202ENST00000460625 DMRT2Q9Y5R5 561 aa14.6□□□□□ -0.07
UPK1B-202ENST00000460625 DCCP43146 1447 aa14.6□□□□□ -0.07
UPK1B-202ENST00000460625 PIK3C2AO00443 1686 aa14.6□□□□□ -0.07
UPK1B-202ENST00000460625 SHPRHQ149N8 1683 aa14.6□□□□□ -0.07
UPK1B-202ENST00000460625 MAP2P11137 1827 aaKnown RBP14.6□□□□□ -0.07
UPK1B-202ENST00000460625 COG3Q96JB2 828 aa14.6□□□□□ -0.07
UPK1B-202ENST00000460625 ADAMTS8Q9UP79 889 aa14.6□□□□□ -0.07
UPK1B-202ENST00000460625 OVOS2A0A0J9YW53 1432 aa14.6□□□□□ -0.07
UPK1B-202ENST00000460625 OVOS2Q6IE36 1432 aa14.6□□□□□ -0.07
UPK1B-202ENST00000460625 MSH6P52701 1360 aa14.59□□□□□ -0.07
UPK1B-202ENST00000460625 TTC21AQ8NDW8 1320 aa14.58□□□□□ -0.08
UPK1B-202ENST00000460625 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
UPK1B-202ENST00000460625 FOXO3O43524 673 aa14.57□□□□□ -0.08
UPK1B-202ENST00000460625 WDR43Q15061 677 aaKnown RBP eCLIP14.57□□□□□ -0.08
UPK1B-202ENST00000460625 POLKQ9UBT6 870 aa14.57□□□□□ -0.08
UPK1B-202ENST00000460625 MARF1Q9Y4F3 1742 aaKnown RBP14.57□□□□□ -0.08
UPK1B-202ENST00000460625 BLMP54132 1417 aaPredicted RBP14.57□□□□□ -0.08
UPK1B-202ENST00000460625 COL3A1P02461 1466 aaPredicted RBP14.57□□□□□ -0.08
UPK1B-202ENST00000460625 XPCQ01831 940 aaPredicted RBP14.56□□□□□ -0.08
UPK1B-202ENST00000460625 CADPS2Q86UW7 1296 aa14.56□□□□□ -0.08
UPK1B-202ENST00000460625 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
UPK1B-202ENST00000460625 PSME1Q06323 249 aa14.56□□□□□ -0.08
UPK1B-202ENST00000460625 EMILIN1Q9Y6C2 1016 aa14.56□□□□□ -0.08
UPK1B-202ENST00000460625 RRS1Q15050 365 aaKnown RBP14.55□□□□□ -0.08
UPK1B-202ENST00000460625 NUTM2GQ5VZR2 741 aa14.55□□□□□ -0.08
UPK1B-202ENST00000460625 KIF1AQ12756 1690 aa14.55□□□□□ -0.08
UPK1B-202ENST00000460625 AATKQ6ZMQ8 1374 aa14.55□□□□□ -0.08
UPK1B-202ENST00000460625 USP31Q70CQ4 1352 aa14.55□□□□□ -0.08
UPK1B-202ENST00000460625 CFAP53Q96M91 514 aa14.54□□□□□ -0.08
UPK1B-202ENST00000460625 ZBED9Q6R2W3 1325 aa14.54□□□□□ -0.08
UPK1B-202ENST00000460625 PNPLA6Q8IY17 1366 aa14.54□□□□□ -0.08
UPK1B-202ENST00000460625 PPM1GO15355 546 aaPredicted RBP14.54□□□□□ -0.08
UPK1B-202ENST00000460625 SOX12O15370 315 aa14.54□□□□□ -0.08
UPK1B-202ENST00000460625 ABTB2Q8N961 1025 aa14.54□□□□□ -0.08
UPK1B-202ENST00000460625 DDX17Q92841 729 aaKnown RBP14.54□□□□□ -0.08
UPK1B-202ENST00000460625 INSRP06213 1382 aa14.54□□□□□ -0.08
UPK1B-202ENST00000460625 SMG6Q86US8 1419 aaKnown RBP14.54□□□□□ -0.08
UPK1B-202ENST00000460625 NLRP6P59044 892 aa14.53□□□□□ -0.08
UPK1B-202ENST00000460625 USP54Q70EL1 1684 aa14.53□□□□□ -0.08
UPK1B-202ENST00000460625 CCDC146Q8IYE0 955 aa14.53□□□□□ -0.08
UPK1B-202ENST00000460625 TRPM3Q9HCF6 1732 aaPredicted RBP14.53□□□□□ -0.08
UPK1B-202ENST00000460625 SALL2Q9Y467 1007 aaPredicted RBP14.52□□□□□ -0.09
UPK1B-202ENST00000460625 KRT28Q7Z3Y7 464 aa14.51□□□□□ -0.09
UPK1B-202ENST00000460625 PEAK1Q9H792 1746 aa14.51□□□□□ -0.09
UPK1B-202ENST00000460625 LTBP4Q8N2S1 1624 aa14.5□□□□□ -0.09
UPK1B-202ENST00000460625 CDK12Q9NYV4 1490 aaPredicted RBP14.5□□□□□ -0.09
UPK1B-202ENST00000460625 BRINP3Q76B58 766 aa14.49□□□□□ -0.09
UPK1B-202ENST00000460625 SLAIN2Q9P270 581 aa14.49□□□□□ -0.09
UPK1B-202ENST00000460625 DIAPH1O60610 1272 aaKnown RBP14.49□□□□□ -0.09
UPK1B-202ENST00000460625 U2AF1L5P0DN76 240 aaPredicted RBP14.48□□□□□ -0.09
UPK1B-202ENST00000460625 U2AF1Q01081 240 aaKnown RBP eCLIP14.48□□□□□ -0.09
UPK1B-202ENST00000460625 MAP3K19Q56UN5 1328 aa14.47□□□□□ -0.09
UPK1B-202ENST00000460625 U2SURPO15042 1029 aaKnown RBP14.47□□□□□ -0.09
UPK1B-202ENST00000460625 ALS2Q96Q42 1657 aa14.46□□□□□ -0.09
UPK1B-202ENST00000460625 PXDNQ92626 1479 aa14.46□□□□□ -0.09
UPK1B-202ENST00000460625 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
UPK1B-202ENST00000460625 IL13P35225 146 aa14.46□□□□□ -0.09
UPK1B-202ENST00000460625 HSP90AB2PQ58FF8 381 aa14.46□□□□□ -0.09
UPK1B-202ENST00000460625 LMOD2Q6P5Q4 547 aa14.46□□□□□ -0.09
UPK1B-202ENST00000460625 NUDCQ9Y266 331 aa14.46□□□□□ -0.09
UPK1B-202ENST00000460625 NPHP3Q7Z494 1330 aa14.46□□□□□ -0.1
UPK1B-202ENST00000460625 APAF1O14727 1248 aa14.45□□□□□ -0.1
UPK1B-202ENST00000460625 NFAT5O94916 1531 aa14.45□□□□□ -0.1
UPK1B-202ENST00000460625 LTN1O94822 1766 aa14.43□□□□□ -0.1
UPK1B-202ENST00000460625 RUNDC1Q96C34 613 aa14.43□□□□□ -0.1
UPK1B-202ENST00000460625 SLIT3O75094 1523 aa14.43□□□□□ -0.1
UPK1B-202ENST00000460625 SBNO1A3KN83 1393 aa14.43□□□□□ -0.1
UPK1B-202ENST00000460625 EIF4A2Q14240 407 aaKnown RBP14.43□□□□□ -0.1
UPK1B-202ENST00000460625 PLEKHF1Q96S99 279 aa14.43□□□□□ -0.1
UPK1B-202ENST00000460625 IQSEC2Q5JU85 1478 aa14.42□□□□□ -0.1
UPK1B-202ENST00000460625 MED1Q15648 1581 aaPredicted RBP14.42□□□□□ -0.1
UPK1B-202ENST00000460625 USP19O94966 1318 aa14.42□□□□□ -0.1
UPK1B-202ENST00000460625 FLT4P35916 1363 aa14.41□□□□□ -0.1
UPK1B-202ENST00000460625 HMOX1P09601 288 aa14.41□□□□□ -0.1
UPK1B-202ENST00000460625 AMPHP49418 695 aa14.41□□□□□ -0.1
UPK1B-202ENST00000460625 TNS3Q68CZ2 1445 aa14.41□□□□□ -0.1
UPK1B-202ENST00000460625 RRP7AQ9Y3A4 280 aaKnown RBP14.41□□□□□ -0.1
UPK1B-202ENST00000460625 GCP02774 474 aa14.41□□□□□ -0.1
UPK1B-202ENST00000460625 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
UPK1B-202ENST00000460625 CDCA7LQ96GN5 454 aa14.41□□□□□ -0.1
UPK1B-202ENST00000460625 SPATA31A3Q5VYP0 1347 aa14.4□□□□□ -0.1
UPK1B-202ENST00000460625 HOXC9P31274 260 aa14.4□□□□□ -0.1
UPK1B-202ENST00000460625 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
UPK1B-202ENST00000460625 SOS2Q07890 1332 aaPredicted RBP14.4□□□□□ -0.1
UPK1B-202ENST00000460625 ZNF521Q96K83 1311 aa14.4□□□□□ -0.1
UPK1B-202ENST00000460625 NHSL1Q5SYE7 1610 aa14.4□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms