RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 KCNH2Q12809 1159 aa9.36□□□□□ -0.91
VBP1-202ENST00000460509 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
VBP1-202ENST00000460509 FCF1Q9Y324 198 aaKnown RBP9.36□□□□□ -0.91
VBP1-202ENST00000460509 ARID3CA6NKF2 412 aa9.35□□□□□ -0.91
VBP1-202ENST00000460509 GGCXP38435 758 aa9.34□□□□□ -0.91
VBP1-202ENST00000460509 FKBPLQ9UIM3 349 aa9.33□□□□□ -0.92
VBP1-202ENST00000460509 PTCRAQ6ISU1 281 aaPredicted RBP9.32□□□□□ -0.92
VBP1-202ENST00000460509 PPP1R18Q6NYC8 613 aa9.32□□□□□ -0.92
VBP1-202ENST00000460509 FNBP4Q8N3X1 1017 aaPredicted RBP9.32□□□□□ -0.92
VBP1-202ENST00000460509 UNC93B1Q9H1C4 597 aa9.32□□□□□ -0.92
VBP1-202ENST00000460509 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
VBP1-202ENST00000460509 VAC14Q08AM6 782 aa9.31□□□□□ -0.92
VBP1-202ENST00000460509 IRF5Q13568 498 aa9.31□□□□□ -0.92
VBP1-202ENST00000460509 ZBTB24O43167 697 aaPredicted RBP9.3□□□□□ -0.92
VBP1-202ENST00000460509 ARMC2Q8NEN0 867 aa9.3□□□□□ -0.92
VBP1-202ENST00000460509 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.3□□□□□ -0.92
VBP1-202ENST00000460509 WASHC4Q2M389 1173 aa9.29□□□□□ -0.92
VBP1-202ENST00000460509 ARID3AQ99856 593 aa9.29□□□□□ -0.92
VBP1-202ENST00000460509 POM121CA8CG34 1229 aa9.28□□□□□ -0.92
VBP1-202ENST00000460509 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
VBP1-202ENST00000460509 GPR37L1O60883 481 aa9.27□□□□□ -0.93
VBP1-202ENST00000460509 AGERQ15109 404 aa9.27□□□□□ -0.93
VBP1-202ENST00000460509 NBPF14Q5TI25 921 aa9.27□□□□□ -0.93
VBP1-202ENST00000460509 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.93
VBP1-202ENST00000460509 BAP1Q92560 729 aa9.27□□□□□ -0.93
VBP1-202ENST00000460509 ZC3H4Q9UPT8 1303 aaKnown RBP9.26□□□□□ -0.93
VBP1-202ENST00000460509 ZBBXA8MT70 800 aa9.25□□□□□ -0.93
VBP1-202ENST00000460509 PTK2Q05397 1052 aa9.25□□□□□ -0.93
VBP1-202ENST00000460509 CALR3Q96L12 384 aaKnown RBP9.25□□□□□ -0.93
VBP1-202ENST00000460509 MAGEB6P1A0A0J9YX57 407 aa9.24□□□□□ -0.93
VBP1-202ENST00000460509 FBXO45P0C2W1 286 aa9.24□□□□□ -0.93
VBP1-202ENST00000460509 NR1H3Q13133 447 aa9.24□□□□□ -0.93
VBP1-202ENST00000460509 PLA2G2CQ5R387 149 aa9.24□□□□□ -0.93
VBP1-202ENST00000460509 PDXDC2PQ6P474 469 aa9.24□□□□□ -0.93
VBP1-202ENST00000460509 CARD14Q9BXL6 1004 aa9.24□□□□□ -0.93
VBP1-202ENST00000460509 C1orf115Q9H7X2 142 aa9.24□□□□□ -0.93
VBP1-202ENST00000460509 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
VBP1-202ENST00000460509 Q6ZNB5 142 aa9.23□□□□□ -0.93
VBP1-202ENST00000460509 ZBTB33Q86T24 672 aa9.23□□□□□ -0.93
VBP1-202ENST00000460509 GPKOWQ92917 476 aaPredicted RBP eCLIP9.23□□□□□ -0.93
VBP1-202ENST00000460509 GLMNQ92990 594 aa9.23□□□□□ -0.93
VBP1-202ENST00000460509 ARHGAP9Q9BRR9 750 aa9.23□□□□□ -0.93
VBP1-202ENST00000460509 PRKD2Q9BZL6 878 aa9.23□□□□□ -0.93
VBP1-202ENST00000460509 EIF4G2P78344 907 aaKnown RBP eCLIP9.22□□□□□ -0.93
VBP1-202ENST00000460509 SEMA3FQ13275 785 aa9.22□□□□□ -0.93
VBP1-202ENST00000460509 TRIM32Q13049 653 aa9.21□□□□□ -0.94
VBP1-202ENST00000460509 ZNF511Q8NB15 262 aa9.21□□□□□ -0.94
VBP1-202ENST00000460509 FOXJ1Q92949 421 aa9.21□□□□□ -0.94
VBP1-202ENST00000460509 CCDC97Q96F63 343 aaPredicted RBP9.21□□□□□ -0.94
VBP1-202ENST00000460509 CCDC82Q8N4S0 544 aa9.2□□□□□ -0.94
VBP1-202ENST00000460509 PCDHB9Q9Y5E1 797 aa9.2□□□□□ -0.94
VBP1-202ENST00000460509 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
VBP1-202ENST00000460509 SH3BP2P78314 561 aa9.19□□□□□ -0.94
VBP1-202ENST00000460509 BPHLQ86WA6 291 aaPredicted RBP9.19□□□□□ -0.94
VBP1-202ENST00000460509 ADAM32Q8TC27 787 aa9.19□□□□□ -0.94
VBP1-202ENST00000460509 GPSM3Q9Y4H4 160 aa9.19□□□□□ -0.94
VBP1-202ENST00000460509 GFRA3O60609 400 aa9.18□□□□□ -0.94
VBP1-202ENST00000460509 SOX11P35716 441 aa9.17□□□□□ -0.94
VBP1-202ENST00000460509 RPIAP49247 311 aa9.17□□□□□ -0.94
VBP1-202ENST00000460509 LIAT1Q6ZQX7 453 aa9.17□□□□□ -0.94
VBP1-202ENST00000460509 SH3BP5LQ7L8J4 393 aa9.17□□□□□ -0.94
VBP1-202ENST00000460509 DZIP3Q86Y13 1208 aaKnown RBP9.17□□□□□ -0.94
VBP1-202ENST00000460509 ADAMTS19Q8TE59 1207 aa9.17□□□□□ -0.94
VBP1-202ENST00000460509 OCSTAMPQ9BR26 566 aa9.17□□□□□ -0.94
VBP1-202ENST00000460509 SLC19A1P41440 591 aa9.16□□□□□ -0.94
VBP1-202ENST00000460509 ALG2Q9H553 416 aa9.16□□□□□ -0.94
VBP1-202ENST00000460509 SERPINA10Q9UK55 444 aa9.16□□□□□ -0.94
VBP1-202ENST00000460509 LCE2BO14633 110 aa9.15□□□□□ -0.94
VBP1-202ENST00000460509 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.94
VBP1-202ENST00000460509 WNT7BP56706 349 aa9.14□□□□□ -0.95
VBP1-202ENST00000460509 SKOR1P84550 965 aa9.14□□□□□ -0.95
VBP1-202ENST00000460509 SH3RF1Q7Z6J0 888 aa9.14□□□□□ -0.95
VBP1-202ENST00000460509 EHBP1Q8NDI1 1231 aa9.14□□□□□ -0.95
VBP1-202ENST00000460509 V9GY48 417 aaPredicted RBP9.14□□□□□ -0.95
VBP1-202ENST00000460509 LAPTM4AQ15012 233 aa9.13□□□□□ -0.95
VBP1-202ENST00000460509 ERFEQ4G0M1 354 aa9.13□□□□□ -0.95
VBP1-202ENST00000460509 SLC10A4Q96EP9 437 aa9.13□□□□□ -0.95
VBP1-202ENST00000460509 RC3H1Q5TC82 1133 aaKnown RBP9.12□□□□□ -0.95
VBP1-202ENST00000460509 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
VBP1-202ENST00000460509 EMID1Q96A84 441 aaPredicted RBP9.12□□□□□ -0.95
VBP1-202ENST00000460509 VARSP26640 1264 aaKnown RBP9.11□□□□□ -0.95
VBP1-202ENST00000460509 ARID5BQ14865 1188 aa9.11□□□□□ -0.95
VBP1-202ENST00000460509 FAM174AQ8TBP5 190 aa9.11□□□□□ -0.95
VBP1-202ENST00000460509 RFX1P22670 979 aa9.1□□□□□ -0.95
VBP1-202ENST00000460509 MCCD1P59942 119 aaPredicted RBP9.1□□□□□ -0.95
VBP1-202ENST00000460509 SLFNL1Q499Z3 407 aa9.1□□□□□ -0.95
VBP1-202ENST00000460509 CEP126Q9P2H0 1117 aa9.1□□□□□ -0.95
VBP1-202ENST00000460509 RAB15P59190 212 aa9.09□□□□□ -0.95
VBP1-202ENST00000460509 FOXC1Q12948 553 aa9.09□□□□□ -0.95
VBP1-202ENST00000460509 ZNF697Q5TEC3 545 aa9.09□□□□□ -0.95
VBP1-202ENST00000460509 SPRYD7Q5W111 196 aa9.09□□□□□ -0.95
VBP1-202ENST00000460509 PIK3CDO00329 1044 aa9.08□□□□□ -0.96
VBP1-202ENST00000460509 NRG2O14511 850 aaPredicted RBP9.08□□□□□ -0.96
VBP1-202ENST00000460509 TRAF7Q6Q0C0 670 aa9.08□□□□□ -0.96
VBP1-202ENST00000460509 VASH1Q7L8A9 365 aaPredicted RBP9.08□□□□□ -0.96
VBP1-202ENST00000460509 RNF135Q8IUD6 432 aa9.08□□□□□ -0.96
VBP1-202ENST00000460509 PPP1R12CQ9BZL4 782 aa9.08□□□□□ -0.96
VBP1-202ENST00000460509 TFIP11Q9UBB9 837 aaKnown RBP9.08□□□□□ -0.96
VBP1-202ENST00000460509 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
VBP1-202ENST00000460509 SKIP12755 728 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms