RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
HERC4-207ENST00000460168 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
HERC4-207ENST00000460168 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
HERC4-207ENST00000460168 NUTM2FA1L443 756 aa13.77□□□□□ -0.21
HERC4-207ENST00000460168 PRR36Q9H6K5 1346 aa13.76□□□□□ -0.21
HERC4-207ENST00000460168 GGNBP2Q9H3C7 697 aa13.75□□□□□ -0.21
HERC4-207ENST00000460168 CDC42BPGQ6DT37 1551 aa13.74□□□□□ -0.21
HERC4-207ENST00000460168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.74□□□□□ -0.213e-6■■■□□ 18.7
HERC4-207ENST00000460168 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
HERC4-207ENST00000460168 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
HERC4-207ENST00000460168 FYB1O15117 783 aa13.74□□□□□ -0.21
HERC4-207ENST00000460168 WDR43Q15061 677 aaKnown RBP eCLIP13.74□□□□□ -0.21
HERC4-207ENST00000460168 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
HERC4-207ENST00000460168 HSPA2P54652 639 aa13.73□□□□□ -0.21
HERC4-207ENST00000460168 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
HERC4-207ENST00000460168 KIF20BQ96Q89 1820 aa13.72□□□□□ -0.21
HERC4-207ENST00000460168 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
HERC4-207ENST00000460168 ANKRD26Q9UPS8 1709 aa13.72□□□□□ -0.21
HERC4-207ENST00000460168 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
HERC4-207ENST00000460168 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
HERC4-207ENST00000460168 DHX37Q8IY37 1157 aaKnown RBP13.71□□□□□ -0.21
HERC4-207ENST00000460168 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.21
HERC4-207ENST00000460168 SENP3-EIF4A1A0A087X0R7 540 aa13.71□□□□□ -0.22
HERC4-207ENST00000460168 AKAP12Q02952 1782 aa13.71□□□□□ -0.22
HERC4-207ENST00000460168 MON2Q7Z3U7 1717 aa13.71□□□□□ -0.22
HERC4-207ENST00000460168 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
HERC4-207ENST00000460168 C14orf37Q86TY3 774 aa13.7□□□□□ -0.22
HERC4-207ENST00000460168 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
HERC4-207ENST00000460168 ACEP12821 1306 aa13.7□□□□□ -0.22
HERC4-207ENST00000460168 MTHFSP49914 203 aa13.7□□□□□ -0.22
HERC4-207ENST00000460168 ADAMTS8Q9UP79 889 aa13.7□□□□□ -0.22
HERC4-207ENST00000460168 POLR3AO14802 1390 aaPredicted RBP13.69□□□□□ -0.22
HERC4-207ENST00000460168 NKTRP30414 1462 aaKnown RBP13.69□□□□□ -0.22
HERC4-207ENST00000460168 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
HERC4-207ENST00000460168 NWD1Q149M9 1564 aa13.69□□□□□ -0.22
HERC4-207ENST00000460168 RGPD8O14715 1765 aaPredicted RBP13.69□□□□□ -0.22
HERC4-207ENST00000460168 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
HERC4-207ENST00000460168 MSH5O43196 834 aa13.68□□□□□ -0.22
HERC4-207ENST00000460168 PMFBP1Q8TBY8 1022 aa13.68□□□□□ -0.22
HERC4-207ENST00000460168 CFAP53Q96M91 514 aa13.68□□□□□ -0.22
HERC4-207ENST00000460168 ANKARQ7Z5J8 1434 aa13.68□□□□□ -0.22
HERC4-207ENST00000460168 ADGRL3Q9HAR2 1447 aa13.68□□□□□ -0.22
HERC4-207ENST00000460168 INSRP06213 1382 aa13.68□□□□□ -0.22
HERC4-207ENST00000460168 FMN2Q9NZ56 1722 aa13.68□□□□□ -0.22
HERC4-207ENST00000460168 BLMP54132 1417 aaPredicted RBP13.67□□□□□ -0.22
HERC4-207ENST00000460168 VSIG10Q8N0Z9 540 aa13.67□□□□□ -0.22
HERC4-207ENST00000460168 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
HERC4-207ENST00000460168 NME9Q86XW9 330 aa13.67□□□□□ -0.22
HERC4-207ENST00000460168 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
HERC4-207ENST00000460168 USP6P35125 1406 aa13.66□□□□□ -0.22
HERC4-207ENST00000460168 RBM19Q9Y4C8 960 aaKnown RBP13.66□□□□□ -0.22
HERC4-207ENST00000460168 COG3Q96JB2 828 aa13.65□□□□□ -0.22
HERC4-207ENST00000460168 NRKQ7Z2Y5 1582 aa13.65□□□□□ -0.22
HERC4-207ENST00000460168 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
HERC4-207ENST00000460168 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
HERC4-207ENST00000460168 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
HERC4-207ENST00000460168 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
HERC4-207ENST00000460168 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
HERC4-207ENST00000460168 PPM1GO15355 546 aaPredicted RBP13.62□□□□□ -0.23
HERC4-207ENST00000460168 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
HERC4-207ENST00000460168 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
HERC4-207ENST00000460168 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
HERC4-207ENST00000460168 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
HERC4-207ENST00000460168 STRCQ7RTU9 1775 aa13.61□□□□□ -0.23
HERC4-207ENST00000460168 FBLN1P23142 703 aa13.6□□□□□ -0.23
HERC4-207ENST00000460168 HAP1P54257 671 aaPredicted RBP13.6□□□□□ -0.23
HERC4-207ENST00000460168 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
HERC4-207ENST00000460168 PHF8Q9UPP1 1060 aa13.6□□□□□ -0.23
HERC4-207ENST00000460168 TTC21AQ8NDW8 1320 aa13.6□□□□□ -0.23
HERC4-207ENST00000460168 SSH2Q76I76 1423 aa13.6□□□□□ -0.23
HERC4-207ENST00000460168 STRCP1A6NGW2 1772 aa13.6□□□□□ -0.23
HERC4-207ENST00000460168 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
HERC4-207ENST00000460168 C19orf44Q9H6X5 657 aa13.59□□□□□ -0.23
HERC4-207ENST00000460168 POLKQ9UBT6 870 aa13.59□□□□□ -0.23
HERC4-207ENST00000460168 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
HERC4-207ENST00000460168 TMEM94Q12767 1356 aa13.59□□□□□ -0.23
HERC4-207ENST00000460168 AATKQ6ZMQ8 1374 aa13.58□□□□□ -0.24
HERC4-207ENST00000460168 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
HERC4-207ENST00000460168 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
HERC4-207ENST00000460168 OVOS2A0A0J9YW53 1432 aa13.58□□□□□ -0.24
HERC4-207ENST00000460168 OVOS2Q6IE36 1432 aa13.58□□□□□ -0.24
HERC4-207ENST00000460168 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.24
HERC4-207ENST00000460168 EMILIN1Q9Y6C2 1016 aa13.58□□□□□ -0.24
HERC4-207ENST00000460168 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
HERC4-207ENST00000460168 DIAPH1O60610 1272 aaKnown RBP13.57□□□□□ -0.24
HERC4-207ENST00000460168 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
HERC4-207ENST00000460168 RRS1Q15050 365 aaKnown RBP13.57□□□□□ -0.24
HERC4-207ENST00000460168 NAP1L5Q96NT1 182 aaPredicted RBP13.57□□□□□ -0.24
HERC4-207ENST00000460168 SMG6Q86US8 1419 aaKnown RBP13.57□□□□□ -0.24
HERC4-207ENST00000460168 PNPLA6Q8IY17 1366 aa13.57□□□□□ -0.24
HERC4-207ENST00000460168 APAF1O14727 1248 aa13.56□□□□□ -0.24
HERC4-207ENST00000460168 ATF3P18847 181 aa13.56□□□□□ -0.24
HERC4-207ENST00000460168 PDE3BQ13370 1112 aa13.56□□□□□ -0.24
HERC4-207ENST00000460168 PSME1Q06323 249 aa13.55□□□□□ -0.24
HERC4-207ENST00000460168 NCOA3Q9Y6Q9 1424 aa13.55□□□□□ -0.24
HERC4-207ENST00000460168 PIK3C2AO00443 1686 aa13.55□□□□□ -0.24
HERC4-207ENST00000460168 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
HERC4-207ENST00000460168 SOX12O15370 315 aa13.55□□□□□ -0.24
HERC4-207ENST00000460168 RUNDC1Q96C34 613 aa13.55□□□□□ -0.24
HERC4-207ENST00000460168 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms