RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 PROSER2Q86WR7 435 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-203ENST00000460110 FTSJ3Q8IY81 847 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-203ENST00000460110 ALKQ9UM73 1620 aa12.1□□□□□ -0.47
NUDCD3-203ENST00000460110 SULT6B1Q6IMI4 303 aa12.09□□□□□ -0.47
NUDCD3-203ENST00000460110 TMPOP42166 694 aaKnown RBP12.09□□□□□ -0.47
NUDCD3-203ENST00000460110 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-203ENST00000460110 MYH16Q9H6N6 1097 aa12.09□□□□□ -0.47
NUDCD3-203ENST00000460110 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
NUDCD3-203ENST00000460110 ZFYVE9O95405 1425 aa12.09□□□□□ -0.47
NUDCD3-203ENST00000460110 FOXO3O43524 673 aa12.09□□□□□ -0.47
NUDCD3-203ENST00000460110 NPC1L1Q9UHC9 1359 aa12.08□□□□□ -0.48
NUDCD3-203ENST00000460110 EXOSC9Q06265 439 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-203ENST00000460110 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
NUDCD3-203ENST00000460110 AGLP35573 1532 aa12.08□□□□□ -0.48
NUDCD3-203ENST00000460110 LAMC1P11047 1609 aa12.08□□□□□ -0.48
NUDCD3-203ENST00000460110 MYO5BQ9ULV0 1848 aa12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 TBX22Q9Y458 520 aa12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 ARHGEF40Q8TER5 1519 aa12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 TULP4Q9NRJ4 1543 aa12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 PUS7Q96PZ0 661 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 POLR3AO14802 1390 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 AEBP1Q8IUX7 1158 aa12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 TMEM131LA2VDJ0 1609 aa12.07□□□□□ -0.48
NUDCD3-203ENST00000460110 PPLO60437 1756 aa12.06□□□□□ -0.48
NUDCD3-203ENST00000460110 TTC21BQ7Z4L5 1316 aa12.06□□□□□ -0.48
NUDCD3-203ENST00000460110 FAM83GA6ND36 823 aa12.06□□□□□ -0.48
NUDCD3-203ENST00000460110 KIF13AQ9H1H9 1805 aa12.06□□□□□ -0.48
NUDCD3-203ENST00000460110 PTPRMP28827 1452 aa12.05□□□□□ -0.48
NUDCD3-203ENST00000460110 TNNQ9UQP3 1299 aa12.05□□□□□ -0.48
NUDCD3-203ENST00000460110 QRICH2Q9H0J4 1663 aa12.05□□□□□ -0.48
NUDCD3-203ENST00000460110 SETBP1Q9Y6X0 1596 aa12.04□□□□□ -0.48
NUDCD3-203ENST00000460110 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-203ENST00000460110 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
NUDCD3-203ENST00000460110 MIS18AQ9NYP9 233 aa12.03□□□□□ -0.48
NUDCD3-203ENST00000460110 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
NUDCD3-203ENST00000460110 ITPRIPQ8IWB1 547 aa12.03□□□□□ -0.48
NUDCD3-203ENST00000460110 NSD2O96028 1365 aa12.02□□□□□ -0.48
NUDCD3-203ENST00000460110 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.48
NUDCD3-203ENST00000460110 NECTIN2Q92692 538 aa12.02□□□□□ -0.49
NUDCD3-203ENST00000460110 ORAI2Q96SN7 254 aa12.02□□□□□ -0.49
NUDCD3-203ENST00000460110 FCHSD2O94868 740 aa12.01□□□□□ -0.49
NUDCD3-203ENST00000460110 RTF1Q92541 710 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-203ENST00000460110 ZC3H13Q5T200 1668 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-203ENST00000460110 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-203ENST00000460110 MCM10Q7L590 875 aa12.01□□□□□ -0.49
NUDCD3-203ENST00000460110 PLEKHG1Q9ULL1 1385 aa12.01□□□□□ -0.49
NUDCD3-203ENST00000460110 HAP1P54257 671 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-203ENST00000460110 DDX17Q92841 729 aaKnown RBP12□□□□□ -0.49
NUDCD3-203ENST00000460110 KIAA1210Q9ULL0 1709 aa12□□□□□ -0.49
NUDCD3-203ENST00000460110 SPATA31D1Q6ZQQ2 1576 aa12□□□□□ -0.49
NUDCD3-203ENST00000460110 WDR63Q8IWG1 891 aa12□□□□□ -0.49
NUDCD3-203ENST00000460110 RARSP54136 660 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-203ENST00000460110 EIF4A2Q14240 407 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-203ENST00000460110 FANCIQ9NVI1 1328 aa11.99□□□□□ -0.49
NUDCD3-203ENST00000460110 ATF3P18847 181 aa11.99□□□□□ -0.49
NUDCD3-203ENST00000460110 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-203ENST00000460110 ADAMTS13Q76LX8 1427 aa11.99□□□□□ -0.49
NUDCD3-203ENST00000460110 NGEFQ8N5V2 710 aa11.98□□□□□ -0.49
NUDCD3-203ENST00000460110 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
NUDCD3-203ENST00000460110 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
NUDCD3-203ENST00000460110 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
NUDCD3-203ENST00000460110 SSH1Q8WYL5 1049 aa11.98□□□□□ -0.49
NUDCD3-203ENST00000460110 NEURL4Q96JN8 1562 aa11.98□□□□□ -0.49
NUDCD3-203ENST00000460110 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
NUDCD3-203ENST00000460110 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
NUDCD3-203ENST00000460110 NKTRP30414 1462 aaKnown RBP11.97□□□□□ -0.49
NUDCD3-203ENST00000460110 NLRP1Q9C000 1473 aa11.97□□□□□ -0.49
NUDCD3-203ENST00000460110 ZKSCAN2Q63HK3 967 aa11.97□□□□□ -0.49
NUDCD3-203ENST00000460110 RNF123Q5XPI4 1314 aa11.97□□□□□ -0.49
NUDCD3-203ENST00000460110 IL13P35225 146 aa11.97□□□□□ -0.49
NUDCD3-203ENST00000460110 ANP32AP39687 249 aaKnown RBP11.97□□□□□ -0.49
NUDCD3-203ENST00000460110 PTPRUQ92729 1446 aa11.96□□□□□ -0.49
NUDCD3-203ENST00000460110 IFT172Q9UG01 1749 aa11.96□□□□□ -0.49
NUDCD3-203ENST00000460110 CSB-PGBD3P0DP91 1061 aa11.96□□□□□ -0.49
NUDCD3-203ENST00000460110 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
NUDCD3-203ENST00000460110 NOB1Q9ULX3 412 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-203ENST00000460110 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.5
NUDCD3-203ENST00000460110 EDC4Q6P2E9 1401 aaKnown RBP11.96□□□□□ -0.5
NUDCD3-203ENST00000460110 RLBP1P12271 317 aa11.96□□□□□ -0.5
NUDCD3-203ENST00000460110 DZIP1LQ8IYY4 767 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-203ENST00000460110 SIRT1Q96EB6 747 aa11.95□□□□□ -0.5
NUDCD3-203ENST00000460110 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-203ENST00000460110 APBB1O00213 710 aa11.94□□□□□ -0.5
NUDCD3-203ENST00000460110 TSPYL6Q8N831 410 aa11.94□□□□□ -0.5
NUDCD3-203ENST00000460110 CABLES1Q8TDN4 633 aa11.94□□□□□ -0.5
NUDCD3-203ENST00000460110 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
NUDCD3-203ENST00000460110 MYOM1P52179 1685 aa11.94□□□□□ -0.5
NUDCD3-203ENST00000460110 SLC4A10Q6U841 1118 aa11.94□□□□□ -0.5
NUDCD3-203ENST00000460110 GNAI1P63096 354 aa11.93□□□□□ -0.5
NUDCD3-203ENST00000460110 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-203ENST00000460110 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-203ENST00000460110 A0A0G2JS52 829 aa11.93□□□□□ -0.5
NUDCD3-203ENST00000460110 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
NUDCD3-203ENST00000460110 C1orf115Q9H7X2 142 aa11.93□□□□□ -0.5
NUDCD3-203ENST00000460110 TWISTNBQ3B726 338 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-203ENST00000460110 ZNF428Q96B54 188 aa11.93□□□□□ -0.5
NUDCD3-203ENST00000460110 CD163L1Q9NR16 1453 aa11.92□□□□□ -0.5
NUDCD3-203ENST00000460110 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms