RNA–Protein interactions for RNA: ENST00000460094.1

CAMSAP1-204, Transcript of calmodulin regulated spectrin associated protein 1, human

TSL 2

Gene CAMSAP1, Length 371 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMSAP1-204	ENST00000460094	SIAH2	O43255	324 aa		10.73	□□□□□ -0.69
CAMSAP1-204	ENST00000460094	SKIV2L	Q15477	1246 aa	Known RBP	10.73	□□□□□ -0.69
CAMSAP1-204	ENST00000460094	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.73	□□□□□ -0.69
CAMSAP1-204	ENST00000460094	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.73	□□□□□ -0.69
CAMSAP1-204	ENST00000460094	BAP1	Q92560	729 aa		10.72	□□□□□ -0.69
CAMSAP1-204	ENST00000460094		J3QL48	77 aa		10.71	□□□□□ -0.69
CAMSAP1-204	ENST00000460094	AXIN1	O15169	862 aa		10.71	□□□□□ -0.69
CAMSAP1-204	ENST00000460094	SMCP	P49901	116 aa	Predicted RBP	10.71	□□□□□ -0.69
CAMSAP1-204	ENST00000460094	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.71	□□□□□ -0.69
CAMSAP1-204	ENST00000460094	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.7	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	MAP10	Q9P2G4	905 aa		10.7	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	POTEC	B2RU33	542 aa		10.69	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	CTH	P32929	405 aa		10.69	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	LINC01559	Q495D7	138 aa		10.69	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	ZNF511	Q8NB15	262 aa		10.69	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.68	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	EHBP1	Q8NDI1	1231 aa		10.68	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	ZNF775	Q96BV0	537 aa	Predicted RBP	10.67	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	PPP2R2D	Q66LE6	453 aa		10.66	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	HELB	Q8NG08	1087 aa	Predicted RBP	10.66	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	TSC1	Q92574	1164 aa		10.66	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	DACH1	Q9UI36	760 aa		10.65	□□□□□ -0.7
CAMSAP1-204	ENST00000460094	VARS	P26640	1264 aa	Known RBP	10.64	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	HPS1	Q92902	700 aa		10.64	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	ALDH1A1	P00352	501 aa		10.63	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	CTDSPL2	Q05D32	466 aa		10.63	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	MPND	Q8N594	471 aa		10.63	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	NEUROD2	Q15784	382 aa		10.62	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	BRPF1	P55201	1214 aa	Predicted RBP	10.61	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	FOXJ1	Q92949	421 aa		10.61	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	GOPC	Q9HD26	462 aa		10.61	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	GMPR2	Q9P2T1	348 aa	Known RBP	10.61	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	TPRN	Q4KMQ1	711 aa		10.6	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	C11orf95	C9JLR9	678 aa	Predicted RBP	10.59	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	C4orf48	Q5BLP8	95 aa		10.59	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	TLL2	Q9Y6L7	1015 aa		10.59	□□□□□ -0.71
CAMSAP1-204	ENST00000460094	ARMC2	Q8NEN0	867 aa		10.58	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	ATP13A2	Q9NQ11	1180 aa		10.58	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	WASF2	Q9Y6W5	498 aa		10.58	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	SH3RF1	Q7Z6J0	888 aa		10.57	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	LRRN4	Q8WUT4	740 aa		10.57	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	FAM174A	Q8TBP5	190 aa		10.56	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	CDK15	Q96Q40	435 aa		10.56	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	SH3BP5L	Q7L8J4	393 aa		10.55	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	BPHL	Q86WA6	291 aa	Predicted RBP	10.55	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	IL27	Q8NEV9	243 aa		10.55	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	SENP2	Q9HC62	589 aa		10.55	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	NBPF14	Q5TI25	921 aa		10.54	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.54	□□□□□ -0.72	1e-6	■■■■□ 22.2
CAMSAP1-204	ENST00000460094	C1QTNF2	Q9BXJ5	285 aa		10.54	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	RFC5	P40937	340 aa		10.53	□□□□□ -0.72
CAMSAP1-204	ENST00000460094	AP1G2	O75843	785 aa		10.52	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	ADH1C	P00326	375 aa		10.51	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	NNT	Q13423	1086 aa		10.51	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	NR6A1	Q15406	480 aa		10.51	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	KIFC2	Q96AC6	838 aa		10.51	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	TRIM47	Q96LD4	638 aa		10.51	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.51	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.51	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	AGER	Q15109	404 aa		10.5	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	TREML4	Q6UXN2	200 aa		10.5	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	KLF16	Q9BXK1	252 aa	Predicted RBP	10.5	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	FKBPL	Q9UIM3	349 aa		10.5	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	CAPN5	O15484	640 aa	Predicted RBP	10.49	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	USP17L8	P0C7I0	530 aa		10.49	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	PDXDC2P	Q6P474	469 aa		10.49	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	TRMT44	Q8IYL2	757 aa	Known RBP	10.49	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	HMX1	Q9NP08	348 aa	Predicted RBP	10.49	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	GRM5	P41594	1212 aa		10.48	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	EPS8L1	Q8TE68	723 aa		10.48	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	SNRPB	P14678	240 aa	Known RBP	10.47	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	MAP4K5	Q9Y4K4	846 aa		10.47	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.47	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	TIMP2	P16035	220 aa		10.46	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	NR5A1	Q13285	461 aa		10.46	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	TRIM46	Q7Z4K8	759 aa		10.46	□□□□□ -0.73
CAMSAP1-204	ENST00000460094	NR3C2	P08235	984 aa		10.45	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	ARID5B	Q14865	1188 aa		10.45	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	ERFE	Q4G0M1	354 aa		10.45	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	TMEM259	Q4ZIN3	620 aa		10.45	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	OCSTAMP	Q9BR26	566 aa		10.45	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	MAGEB6P1	A0A0J9YX57	407 aa		10.44	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	WFS1	O76024	890 aa		10.43	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	WDR4	P57081	412 aa	Known RBP	10.43	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	BMP1	P13497	986 aa		10.42	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	LCE2A	Q5TA79	106 aa	Predicted RBP	10.42	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	ARHGAP9	Q9BRR9	750 aa		10.42	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	CARD14	Q9BXL6	1004 aa		10.42	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	TRIM34	Q9BYJ4	488 aa		10.42	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	GPSM3	Q9Y4H4	160 aa		10.42	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	VASH1	Q7L8A9	365 aa	Predicted RBP	10.41	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	ITPKC	Q96DU7	683 aa		10.4	□□□□□ -0.74
CAMSAP1-204	ENST00000460094	FSHR	P23945	695 aa		10.39	□□□□□ -0.75
CAMSAP1-204	ENST00000460094	PTK2	Q05397	1052 aa		10.39	□□□□□ -0.75
CAMSAP1-204	ENST00000460094	NFX1	Q12986	1120 aa	Known RBP	10.39	□□□□□ -0.75
CAMSAP1-204	ENST00000460094	GJD4	Q96KN9	370 aa	Predicted RBP	10.39	□□□□□ -0.75
CAMSAP1-204	ENST00000460094	ZIC2	O95409	532 aa	Predicted RBP	10.38	□□□□□ -0.75
CAMSAP1-204	ENST00000460094	ZFAND3	Q9H8U3	227 aa		10.38	□□□□□ -0.75
CAMSAP1-204	ENST00000460094	TERT	O14746	1132 aa	Known RBP	10.37	□□□□□ -0.75
CAMSAP1-204	ENST00000460094	MRPL14	Q6P1L8	145 aa	Known RBP	10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms