RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
THBS3-204ENST00000460050 RXRBP28702 533 aa20.19■□□□□ 0.82
THBS3-204ENST00000460050 QTRT2Q9H974 415 aaKnown RBP20.19■□□□□ 0.82
THBS3-204ENST00000460050 CABP1Q9NZU7 370 aa20.19■□□□□ 0.82
THBS3-204ENST00000460050 CRYBG1Q9Y4K1 1723 aa20.19■□□□□ 0.82
THBS3-204ENST00000460050 ATAD2Q6PL18 1390 aa20.17■□□□□ 0.82
THBS3-204ENST00000460050 BCL9LQ86UU0 1499 aa20.17■□□□□ 0.82
THBS3-204ENST00000460050 SLIT2O94813 1529 aa20.16■□□□□ 0.82
THBS3-204ENST00000460050 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.16■□□□□ 0.82
THBS3-204ENST00000460050 RBM6P78332 1123 aaKnown RBP20.15■□□□□ 0.82
THBS3-204ENST00000460050 TRPC5Q9UL62 973 aaPredicted RBP20.15■□□□□ 0.82
THBS3-204ENST00000460050 ATRNO75882 1429 aa20.15■□□□□ 0.82
THBS3-204ENST00000460050 USP6P35125 1406 aa20.15■□□□□ 0.82
THBS3-204ENST00000460050 CDK12Q9NYV4 1490 aaPredicted RBP20.15■□□□□ 0.82
THBS3-204ENST00000460050 PLCH1Q4KWH8 1693 aa20.15■□□□□ 0.82
THBS3-204ENST00000460050 PHRF1Q9P1Y6 1649 aaKnown RBP20.14■□□□□ 0.81
THBS3-204ENST00000460050 ST20-MTHFSA0A0A6YYL1 179 aa20.14■□□□□ 0.81
THBS3-204ENST00000460050 BRD4O60885 1362 aaPredicted RBP20.13■□□□□ 0.81
THBS3-204ENST00000460050 NUTM2GQ5VZR2 741 aa20.13■□□□□ 0.81
THBS3-204ENST00000460050 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
THBS3-204ENST00000460050 USP47Q96K76 1375 aa20.12■□□□□ 0.81
THBS3-204ENST00000460050 ABTB2Q8N961 1025 aa20.12■□□□□ 0.81
THBS3-204ENST00000460050 TESK2Q96S53 571 aa20.12■□□□□ 0.81
THBS3-204ENST00000460050 NWD2Q9ULI1 1742 aa20.12■□□□□ 0.81
THBS3-204ENST00000460050 UNC5CLQ8IV45 518 aa20.11■□□□□ 0.81
THBS3-204ENST00000460050 RGS12O14924 1447 aa20.1■□□□□ 0.81
THBS3-204ENST00000460050 FAM83GA6ND36 823 aa20.1■□□□□ 0.81
THBS3-204ENST00000460050 COL14A1Q05707 1796 aaKnown RBP20.1■□□□□ 0.81
THBS3-204ENST00000460050 SSH2Q76I76 1423 aa20.09■□□□□ 0.81
THBS3-204ENST00000460050 ZNF692Q9BU19 519 aaPredicted RBP20.08■□□□□ 0.81
THBS3-204ENST00000460050 CPSF1Q10570 1443 aaKnown RBP20.08■□□□□ 0.8
THBS3-204ENST00000460050 NRKQ7Z2Y5 1582 aa20.08■□□□□ 0.8
THBS3-204ENST00000460050 USP19O94966 1318 aa20.07■□□□□ 0.8
THBS3-204ENST00000460050 NLRP13Q86W25 1043 aa20.07■□□□□ 0.8
THBS3-204ENST00000460050 MON2Q7Z3U7 1717 aa20.07■□□□□ 0.8
THBS3-204ENST00000460050 NRAPQ86VF7 1730 aa20.07■□□□□ 0.8
THBS3-204ENST00000460050 PIK3C2AO00443 1686 aa20.07■□□□□ 0.8
THBS3-204ENST00000460050 SLC24A1O60721 1099 aa20.06■□□□□ 0.8
THBS3-204ENST00000460050 TMC1Q8TDI8 760 aa20.06■□□□□ 0.8
THBS3-204ENST00000460050 GJD4Q96KN9 370 aaPredicted RBP20.06■□□□□ 0.8
THBS3-204ENST00000460050 PUS7Q96PZ0 661 aaKnown RBP20.06■□□□□ 0.8
THBS3-204ENST00000460050 PRDM11Q9NQV5 511 aa20.06■□□□□ 0.8
THBS3-204ENST00000460050 KTN1Q86UP2 1357 aaKnown RBP20.06■□□□□ 0.8
THBS3-204ENST00000460050 KIAA0232Q92628 1395 aa20.06■□□□□ 0.8
THBS3-204ENST00000460050 GLI3P10071 1580 aa20.05■□□□□ 0.8
THBS3-204ENST00000460050 CD163L1Q9NR16 1453 aa20.05■□□□□ 0.8
THBS3-204ENST00000460050 TTC21BQ7Z4L5 1316 aa20.04■□□□□ 0.8
THBS3-204ENST00000460050 NLRP6P59044 892 aa20.04■□□□□ 0.8
THBS3-204ENST00000460050 ZC3H6P61129 1189 aaKnown RBP20.04■□□□□ 0.8
THBS3-204ENST00000460050 BTG4Q9NY30 223 aa20.04■□□□□ 0.8
THBS3-204ENST00000460050 VPS72Q15906 364 aa20.03■□□□□ 0.8
THBS3-204ENST00000460050 SLC12A5Q9H2X9 1139 aa20.03■□□□□ 0.8
THBS3-204ENST00000460050 TTC21AQ8NDW8 1320 aa20.02■□□□□ 0.8
THBS3-204ENST00000460050 CHRNA2Q15822 529 aa20.02■□□□□ 0.8
THBS3-204ENST00000460050 SLIT3O75094 1523 aa20.02■□□□□ 0.79
THBS3-204ENST00000460050 GCP02774 474 aa20.01■□□□□ 0.79
THBS3-204ENST00000460050 TMF1P82094 1093 aa20.01■□□□□ 0.79
THBS3-204ENST00000460050 HDGFL2Q7Z4V5 671 aaPredicted RBP20.01■□□□□ 0.79
THBS3-204ENST00000460050 CCDC9Q9Y3X0 531 aaKnown RBP20.01■□□□□ 0.79
THBS3-204ENST00000460050 CPDO75976 1380 aa20■□□□□ 0.79
THBS3-204ENST00000460050 A0A1W2PP64 1363 aa19.99■□□□□ 0.79
THBS3-204ENST00000460050 NINLQ9Y2I6 1382 aa19.99■□□□□ 0.79
THBS3-204ENST00000460050 TERF2IPQ9NYB0 399 aa19.99■□□□□ 0.79
THBS3-204ENST00000460050 EDC4Q6P2E9 1401 aaKnown RBP19.97■□□□□ 0.79
THBS3-204ENST00000460050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.97■□□□□ 0.79
THBS3-204ENST00000460050 LMO7Q8WWI1 1683 aa19.97■□□□□ 0.79
THBS3-204ENST00000460050 EP400Q96L91 3159 aa19.95■□□□□ 0.78
THBS3-204ENST00000460050 CAMTA1Q9Y6Y1 1673 aa19.95■□□□□ 0.78
THBS3-204ENST00000460050 USP54Q70EL1 1684 aa19.94■□□□□ 0.78
THBS3-204ENST00000460050 CDCA8Q53HL2 280 aa19.94■□□□□ 0.78
THBS3-204ENST00000460050 NME9Q86XW9 330 aa19.94■□□□□ 0.78
THBS3-204ENST00000460050 UPF1Q92900 1129 aaKnown RBP eCLIP19.94■□□□□ 0.78
THBS3-204ENST00000460050 STRN4Q9NRL3 753 aa19.94■□□□□ 0.78
THBS3-204ENST00000460050 ZBTB7CA1YPR0 619 aa19.93■□□□□ 0.78
THBS3-204ENST00000460050 ZRANB1Q9UGI0 708 aa19.93■□□□□ 0.78
THBS3-204ENST00000460050 SPATA31A5Q5VU36 1347 aa19.93■□□□□ 0.78
THBS3-204ENST00000460050 SPATA31A7Q8IWB4 1347 aa19.93■□□□□ 0.78
THBS3-204ENST00000460050 USP31Q70CQ4 1352 aa19.93■□□□□ 0.78
THBS3-204ENST00000460050 BRWD3Q6RI45 1802 aa19.92■□□□□ 0.78
THBS3-204ENST00000460050 SOX12O15370 315 aa19.92■□□□□ 0.78
THBS3-204ENST00000460050 KCNH5Q8NCM2 988 aa19.92■□□□□ 0.78
THBS3-204ENST00000460050 ANKRD36BQ8N2N9 1353 aa19.92■□□□□ 0.78
THBS3-204ENST00000460050 NFAT5O94916 1531 aa19.92■□□□□ 0.78
THBS3-204ENST00000460050 ONECUT3O60422 494 aaPredicted RBP19.91■□□□□ 0.78
THBS3-204ENST00000460050 EIF4G2P78344 907 aaKnown RBP eCLIP19.91■□□□□ 0.78
THBS3-204ENST00000460050 FAM98CQ17RN3 349 aaKnown RBP19.91■□□□□ 0.78
THBS3-204ENST00000460050 SEPT12Q8IYM1 358 aa19.91■□□□□ 0.78
THBS3-204ENST00000460050 AATKQ6ZMQ8 1374 aa19.91■□□□□ 0.78
THBS3-204ENST00000460050 EVA1CP58658 441 aa19.9■□□□□ 0.78
THBS3-204ENST00000460050 MYOM1P52179 1685 aa19.9■□□□□ 0.78
THBS3-204ENST00000460050 COL18A1P39060 1754 aa19.9■□□□□ 0.78
THBS3-204ENST00000460050 A0A0G2JS52 829 aa19.89■□□□□ 0.77
THBS3-204ENST00000460050 COL5A2P05997 1499 aaPredicted RBP19.89■□□□□ 0.77
THBS3-204ENST00000460050 HSPA5P11021 654 aaKnown RBP19.89■□□□□ 0.77
THBS3-204ENST00000460050 MYT1Q01538 1121 aa19.89■□□□□ 0.77
THBS3-204ENST00000460050 SPATA31A1Q5TZJ5 1347 aa19.89■□□□□ 0.77
THBS3-204ENST00000460050 OVOS2A0A0J9YW53 1432 aa19.88■□□□□ 0.77
THBS3-204ENST00000460050 OVOS2Q6IE36 1432 aa19.88■□□□□ 0.77
THBS3-204ENST00000460050 ARHGEF25Q86VW2 580 aa19.88■□□□□ 0.77
THBS3-204ENST00000460050 LARP1Q6PKG0 1096 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms