RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 UBR1Q8IWV7 1749 aa7.87□□□□□ -1.15
UBQLN4-202ENST00000459954 EVC2Q86UK5 1308 aa7.87□□□□□ -1.15
UBQLN4-202ENST00000459954 NCKAP5LQ9HCH0 1330 aa7.87□□□□□ -1.15
UBQLN4-202ENST00000459954 SPINK5Q9NQ38 1064 aaPredicted RBP7.87□□□□□ -1.15
UBQLN4-202ENST00000459954 TMEM131LA2VDJ0 1609 aa7.87□□□□□ -1.15
UBQLN4-202ENST00000459954 TULP4Q9NRJ4 1543 aa7.87□□□□□ -1.15
UBQLN4-202ENST00000459954 NCOA3Q9Y6Q9 1424 aa7.86□□□□□ -1.15
UBQLN4-202ENST00000459954 CDC42BPGQ6DT37 1551 aa7.86□□□□□ -1.15
UBQLN4-202ENST00000459954 BCAR3O75815 825 aa7.86□□□□□ -1.15
UBQLN4-202ENST00000459954 RARSP54136 660 aaKnown RBP7.86□□□□□ -1.15
UBQLN4-202ENST00000459954 GSE1Q14687 1217 aa7.86□□□□□ -1.15
UBQLN4-202ENST00000459954 CCDC146Q8IYE0 955 aa7.86□□□□□ -1.15
UBQLN4-202ENST00000459954 MYH16Q9H6N6 1097 aa7.86□□□□□ -1.15
UBQLN4-202ENST00000459954 ABCC11Q96J66 1382 aa7.85□□□□□ -1.15
UBQLN4-202ENST00000459954 IL16Q14005 1332 aa7.85□□□□□ -1.15
UBQLN4-202ENST00000459954 KCNA6P17658 529 aa7.85□□□□□ -1.15
UBQLN4-202ENST00000459954 BECN1Q14457 450 aa7.85□□□□□ -1.15
UBQLN4-202ENST00000459954 NFKBIBQ15653 356 aa7.85□□□□□ -1.15
UBQLN4-202ENST00000459954 MAP2P11137 1827 aaKnown RBP7.85□□□□□ -1.15
UBQLN4-202ENST00000459954 DIP2AQ14689 1571 aa7.84□□□□□ -1.15
UBQLN4-202ENST00000459954 CPS1P31327 1500 aa7.84□□□□□ -1.15
UBQLN4-202ENST00000459954 TCP11L2Q8N4U5 519 aa7.84□□□□□ -1.15
UBQLN4-202ENST00000459954 SIRT1Q96EB6 747 aa7.84□□□□□ -1.15
UBQLN4-202ENST00000459954 PNNQ9H307 717 aaKnown RBP7.84□□□□□ -1.15
UBQLN4-202ENST00000459954 RWDD1Q9H446 243 aaPredicted RBP7.84□□□□□ -1.15
UBQLN4-202ENST00000459954 LAS1LQ9Y4W2 734 aaKnown RBP7.84□□□□□ -1.15
UBQLN4-202ENST00000459954 STRCQ7RTU9 1775 aa7.84□□□□□ -1.15
UBQLN4-202ENST00000459954 USP19O94966 1318 aa7.83□□□□□ -1.16
UBQLN4-202ENST00000459954 COL3A1P02461 1466 aaPredicted RBP7.83□□□□□ -1.16
UBQLN4-202ENST00000459954 IGHDP01880 384 aa7.83□□□□□ -1.16
UBQLN4-202ENST00000459954 ATAD2Q6PL18 1390 aa7.83□□□□□ -1.16
UBQLN4-202ENST00000459954 CANXP27824 592 aaKnown RBP7.82□□□□□ -1.16
UBQLN4-202ENST00000459954 MTHFSP49914 203 aa7.82□□□□□ -1.16
UBQLN4-202ENST00000459954 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
UBQLN4-202ENST00000459954 SLC12A5Q9H2X9 1139 aa7.82□□□□□ -1.16
UBQLN4-202ENST00000459954 UPF2Q9HAU5 1272 aaKnown RBP7.82□□□□□ -1.16
UBQLN4-202ENST00000459954 DLC1Q96QB1 1528 aa7.82□□□□□ -1.16
UBQLN4-202ENST00000459954 RGS3P49796 1198 aa7.81□□□□□ -1.16
UBQLN4-202ENST00000459954 BRPF1P55201 1214 aaPredicted RBP7.81□□□□□ -1.16
UBQLN4-202ENST00000459954 HDAC1Q13547 482 aaPredicted RBP7.81□□□□□ -1.16
UBQLN4-202ENST00000459954 MVPQ14764 893 aaKnown RBP7.81□□□□□ -1.16
UBQLN4-202ENST00000459954 ZKSCAN2Q63HK3 967 aa7.81□□□□□ -1.16
UBQLN4-202ENST00000459954 CERKQ8TCT0 537 aa7.81□□□□□ -1.16
UBQLN4-202ENST00000459954 TRAK1Q9UPV9 953 aa7.81□□□□□ -1.16
UBQLN4-202ENST00000459954 DLG5Q8TDM6 1919 aa7.81□□□□□ -1.16
UBQLN4-202ENST00000459954 PPIP5K1Q6PFW1 1433 aa7.8□□□□□ -1.16
UBQLN4-202ENST00000459954 TOM1O60784 492 aa7.8□□□□□ -1.16
UBQLN4-202ENST00000459954 TBC1D32Q96NH3 1257 aa7.8□□□□□ -1.16
UBQLN4-202ENST00000459954 COG6Q9Y2V7 657 aa7.8□□□□□ -1.16
UBQLN4-202ENST00000459954 PNPLA6Q8IY17 1366 aa7.8□□□□□ -1.16
UBQLN4-202ENST00000459954 SETD1AO15047 1707 aaKnown RBP7.8□□□□□ -1.16
UBQLN4-202ENST00000459954 KNDC1Q76NI1 1749 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 ALDH1L2Q3SY69 923 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 SKAP1Q86WV1 359 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 DZIP1LQ8IYY4 767 aaKnown RBP7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 PANK1Q8TE04 598 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 SLC26A8Q96RN1 970 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 PLEKHF1Q96S99 279 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 CHMP4BQ9H444 224 aaKnown RBP7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 C19orf44Q9H6X5 657 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 TERF2IPQ9NYB0 399 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 DDX19BQ9UMR2 479 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 CACNA1FO60840 1977 aa7.79□□□□□ -1.16
UBQLN4-202ENST00000459954 ADAMTS13Q76LX8 1427 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 ALKQ9UM73 1620 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 IPO8O15397 1037 aaKnown RBP7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 CADPS2Q86UW7 1296 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 PROSER2Q86WR7 435 aaPredicted RBP7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 PDZRN3Q9UPQ7 1066 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 AMOTL2Q9Y2J4 779 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 PCDHB15Q9Y5E8 787 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 ATP7BP35670 1465 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 CD163L1Q9NR16 1453 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 AKAP12Q02952 1782 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 KIF16BQ96L93 1317 aa7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 ZNF335Q9H4Z2 1342 aaPredicted RBP7.78□□□□□ -1.16
UBQLN4-202ENST00000459954 A0A1W2PP64 1363 aa7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 EIF5BO60841 1220 aaKnown RBP7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 TMPOP42166 694 aaKnown RBP7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 FBXO41Q8TF61 875 aa7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 FRAT1Q92837 279 aaPredicted RBP7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 ANTXR1Q9H6X2 564 aa7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 MON2Q7Z3U7 1717 aa7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 DCCP43146 1447 aa7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 PTCH1Q13635 1447 aa7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 YTHDC2Q9H6S0 1430 aaKnown RBP7.77□□□□□ -1.17
UBQLN4-202ENST00000459954 FCHSD2O94868 740 aa7.76□□□□□ -1.17
UBQLN4-202ENST00000459954 U2AF1L5P0DN76 240 aaPredicted RBP7.76□□□□□ -1.17
UBQLN4-202ENST00000459954 RLBP1P12271 317 aa7.76□□□□□ -1.17
UBQLN4-202ENST00000459954 U2AF1Q01081 240 aaKnown RBP eCLIP7.76□□□□□ -1.17
UBQLN4-202ENST00000459954 TMEM132EQ6IEE7 984 aa7.76□□□□□ -1.17
UBQLN4-202ENST00000459954 SMC5Q8IY18 1101 aa7.76□□□□□ -1.17
UBQLN4-202ENST00000459954 LTBP4Q8N2S1 1624 aa7.76□□□□□ -1.17
UBQLN4-202ENST00000459954 TECPR2O15040 1411 aa7.76□□□□□ -1.17
UBQLN4-202ENST00000459954 FAM135BQ49AJ0 1406 aa7.76□□□□□ -1.17
UBQLN4-202ENST00000459954 ITSN1Q15811 1721 aa7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 MSH6P52701 1360 aa7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 FRAT2O75474 233 aaPredicted RBP7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 ATF3P18847 181 aa7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 SLC4A3P48751 1232 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms