RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 ICE1Q9Y2F5 2266 aa-0.68□□□□□ -2.52
SNORD54-201ENST00000459159 COL11A1P12107 1806 aaPredicted RBP-0.68□□□□□ -2.52
SNORD54-201ENST00000459159 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 SMG1Q96Q15 3661 aaKnown RBP-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 DNAH9Q9NYC9 4486 aa-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 TRA2AQ13595 282 aaKnown RBP eCLIP-0.69□□□□□ -2.522e-26■■□□□ 14.2
SNORD54-201ENST00000459159 SPATA18Q8TC71 538 aa-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 ZNRF4Q8WWF5 429 aa-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 CENPFP49454 3210 aa-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 BRCA2P51587 3418 aa-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 DNAH12Q6ZR08 3092 aa-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 WDR33Q9C0J8 1336 aaKnown RBP-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 ANK3Q12955 4377 aaKnown RBP-0.69□□□□□ -2.52
SNORD54-201ENST00000459159 PTPRQQ9UMZ3 2332 aa-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 COL22A1Q8NFW1 1626 aaPredicted RBP-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 RANBP2P49792 3224 aaKnown RBP-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 LOC101059948A0A1B0GTJ6 334 aa-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 A0A1B0GVY2 172 aa-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 SYNCRIPO60506 623 aaKnown RBP-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 GSK3AP49840 483 aa-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 LSM14AQ8ND56 463 aaKnown RBP-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 VWCEQ96DN2 955 aa-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 PPP1R10Q96QC0 940 aaKnown RBP-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 RUSC2Q8N2Y8 1516 aa-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 CDH23Q9H251 3354 aa-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 ATMQ13315 3056 aa-0.7□□□□□ -2.52
SNORD54-201ENST00000459159 VPS13DQ5THJ4 4388 aa-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 AGRNO00468 2067 aa-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 CARNS1A5YM72 827 aa-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 SHISA7A6NL88 538 aa-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 MED26O95402 600 aa-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 HOXD8P13378 290 aaPredicted RBP-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 KRTAP10-10P60014 251 aa-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 KRT31Q15323 416 aa-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 EML3Q32P44 896 aa-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 CIARTQ8N365 385 aaPredicted RBP-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 SPRR2FQ96RM1 72 aa-0.71□□□□□ -2.52
SNORD54-201ENST00000459159 VPS13AQ96RL7 3174 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 ONECUT3O60422 494 aaPredicted RBP-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 GAS8-AS1O95177 125 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 C8BP07358 591 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 RBMY1CP0DJD4 496 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 TRIM41Q8WV44 630 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 KIFC2Q96AC6 838 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 ZIC5Q96T25 663 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 GRIP2Q9C0E4 1043 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 CCDC61Q9Y6R9 512 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 MUC4Q99102 2169 aa-0.72□□□□□ -2.52
SNORD54-201ENST00000459159 COL4A3Q01955 1670 aa-0.72□□□□□ -2.53
SNORD54-201ENST00000459159 RBMXL2O75526 392 aaKnown RBP-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 RBMY1A1P0DJD3 496 aaKnown RBP-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 KRTAP12-4P60329 112 aa-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 ZNF252P-AS1Q0IIN9 211 aa-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 C3orf36Q3SXR2 165 aa-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 LCE3AQ5TA76 89 aa-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 ZNF503Q96F45 646 aa-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 BBC3Q96PG8 261 aaPredicted RBP-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 FMNL2Q96PY5 1086 aa-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 COL14A1Q05707 1796 aaKnown RBP-0.73□□□□□ -2.53
SNORD54-201ENST00000459159 DNAH17Q9UFH2 4485 aa-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 BTBD11A6QL63 1104 aa-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 HRO43593 1189 aa-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 ZNF865P0CJ78 1059 aaPredicted RBP-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 ZFAND6Q6FIF0 208 aa-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 MAPK1IP1LQ8NDC0 245 aa-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 BHLHE22Q8NFJ8 381 aaPredicted RBP-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 PRR12Q9ULL5 1215 aa-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 JAG2Q9Y219 1238 aa-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 SPTBN5Q9NRC6 3674 aaKnown RBP-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 LMTK3Q96Q04 1460 aa-0.74□□□□□ -2.53
SNORD54-201ENST00000459159 FRYLO94915 3013 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 LOC100653049A0A140TA62 436 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 KRT34O76011 436 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 KRT37O76014 449 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 ZIC2O95409 532 aaPredicted RBP-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 ITGBL1O95965 494 aaPredicted RBP-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 RXRBP28702 533 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 NKX2-1P43699 371 aaPredicted RBP-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 ODF1Q14990 250 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 RBMY1FQ15415 496 aaKnown RBP-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 KDM7AQ6ZMT4 941 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 GAREM2Q75VX8 874 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 NAA40Q86UY6 237 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 C14orf93Q9H972 538 aaKnown RBP-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 UTS2RQ9UKP6 389 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 ZNF281Q9Y2X9 895 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 PRUNE2Q8WUY3 3088 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 AOX1Q06278 1338 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 ASPMQ8IZT6 3477 aa-0.75□□□□□ -2.53
SNORD54-201ENST00000459159 SPTBN1Q01082 2364 aaKnown RBP-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 SRRM5B3KS81 715 aa-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 PPP1R37O75864 691 aa-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 LUC7L3O95232 432 aaKnown RBP-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 IGFBP1P08833 259 aaPredicted RBP-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 HNRNPKP61978 463 aaKnown RBP eCLIP-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 SREBF2Q12772 1141 aa-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 ILF3Q12906 894 aaKnown RBP eCLIP-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 SRSF5Q13243 272 aaKnown RBP-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 CRIPAKQ8N1N5 446 aa-0.76□□□□□ -2.53
SNORD54-201ENST00000459159 HCN2Q9UL51 889 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms