RNA–Protein interactions for RNA: ENST00000458604.6

PSMC6-202, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-202ENST00000458604 USP17L5A8MUK1 530 aa13.22□□□□□ -0.29
PSMC6-202ENST00000458604 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
PSMC6-202ENST00000458604 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
PSMC6-202ENST00000458604 MORN1Q5T089 497 aa13.22□□□□□ -0.29
PSMC6-202ENST00000458604 SSFA2P28290 1259 aa13.21□□□□□ -0.29
PSMC6-202ENST00000458604 CRTC2Q53ET0 693 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-202ENST00000458604 DNAJC14Q6Y2X3 702 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-202ENST00000458604 FAM196BA6NMK8 535 aa13.2□□□□□ -0.3
PSMC6-202ENST00000458604 SKIP12755 728 aa13.2□□□□□ -0.3
PSMC6-202ENST00000458604 FAM69CQ0P6D2 419 aa13.2□□□□□ -0.3
PSMC6-202ENST00000458604 KCNH8Q96L42 1107 aa13.2□□□□□ -0.3
PSMC6-202ENST00000458604 SLC4A5Q9BY07 1137 aa13.2□□□□□ -0.3
PSMC6-202ENST00000458604 IGSF5Q9NSI5 407 aa13.2□□□□□ -0.3
PSMC6-202ENST00000458604 SLC27A5Q9Y2P5 690 aa13.2□□□□□ -0.3
PSMC6-202ENST00000458604 SLC4A3P48751 1232 aa13.19□□□□□ -0.3
PSMC6-202ENST00000458604 FKBPLQ9UIM3 349 aa13.19□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L12C9JPN9 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L21D6R901 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 PUS10Q3MIT2 529 aaKnown RBP13.18□□□□□ -0.3
PSMC6-202ENST00000458604 NOM1Q5C9Z4 860 aaKnown RBP13.18□□□□□ -0.3
PSMC6-202ENST00000458604 DEPDC4Q8N2C3 294 aa13.18□□□□□ -0.3
PSMC6-202ENST00000458604 F12P00748 615 aaPredicted RBP13.17□□□□□ -0.3
PSMC6-202ENST00000458604 POTEEQ6S8J3 1075 aa13.17□□□□□ -0.3
PSMC6-202ENST00000458604 ARID4AP29374 1257 aaPredicted RBP13.16□□□□□ -0.3
PSMC6-202ENST00000458604 PTK7Q13308 1070 aa13.16□□□□□ -0.3
PSMC6-202ENST00000458604 ABCC9O60706 1549 aa13.16□□□□□ -0.3
PSMC6-202ENST00000458604 SHROOM4Q9ULL8 1493 aa13.16□□□□□ -0.3
PSMC6-202ENST00000458604 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
PSMC6-202ENST00000458604 RNF19BQ6ZMZ0 732 aa13.15□□□□□ -0.3
PSMC6-202ENST00000458604 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.3
PSMC6-202ENST00000458604 EMP3P54852 163 aa13.14□□□□□ -0.31
PSMC6-202ENST00000458604 Q3C1V9 767 aa13.14□□□□□ -0.31
PSMC6-202ENST00000458604 CLP1Q92989 425 aaKnown RBP13.14□□□□□ -0.31
PSMC6-202ENST00000458604 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
PSMC6-202ENST00000458604 DMRTA1Q5VZB9 504 aa13.13□□□□□ -0.31
PSMC6-202ENST00000458604 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
PSMC6-202ENST00000458604 KIAA1522Q9P206 1035 aaPredicted RBP13.13□□□□□ -0.31
PSMC6-202ENST00000458604 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
PSMC6-202ENST00000458604 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
PSMC6-202ENST00000458604 SOWAHDA6NJG2 315 aa13.12□□□□□ -0.31
PSMC6-202ENST00000458604 ARHGAP33O14559 1287 aa13.11□□□□□ -0.31
PSMC6-202ENST00000458604 RNF40O75150 1001 aa13.11□□□□□ -0.31
PSMC6-202ENST00000458604 NCOA4Q13772 614 aa13.11□□□□□ -0.31
PSMC6-202ENST00000458604 PHTF2Q8N3S3 785 aa13.11□□□□□ -0.31
PSMC6-202ENST00000458604 MAP10Q9P2G4 905 aa13.11□□□□□ -0.31
PSMC6-202ENST00000458604 ERCC3P19447 782 aa13.1□□□□□ -0.31
PSMC6-202ENST00000458604 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
PSMC6-202ENST00000458604 CEP126Q9P2H0 1117 aa13.1□□□□□ -0.31
PSMC6-202ENST00000458604 RASA1P20936 1047 aa13.09□□□□□ -0.31
PSMC6-202ENST00000458604 SERPINB4P48594 390 aa13.09□□□□□ -0.31
PSMC6-202ENST00000458604 FAM200AQ8TCP9 573 aa13.09□□□□□ -0.31
PSMC6-202ENST00000458604 USB1Q9BQ65 265 aaKnown RBP13.09□□□□□ -0.31
PSMC6-202ENST00000458604 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
PSMC6-202ENST00000458604 VPS9D1Q9Y2B5 631 aa13.09□□□□□ -0.31
PSMC6-202ENST00000458604 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
PSMC6-202ENST00000458604 BRICD5Q6PL45 260 aa13.08□□□□□ -0.32
PSMC6-202ENST00000458604 OCSTAMPQ9BR26 566 aa13.08□□□□□ -0.32
PSMC6-202ENST00000458604 ATP5J2-PTCD1G3V325 749 aa13.07□□□□□ -0.32
PSMC6-202ENST00000458604 ANKMY2Q8IV38 441 aa13.07□□□□□ -0.32
PSMC6-202ENST00000458604 MRRFQ96E11 262 aaKnown RBP13.06□□□□□ -0.32
PSMC6-202ENST00000458604 CHIC2Q9UKJ5 165 aa13.06□□□□□ -0.32
PSMC6-202ENST00000458604 SALL2Q9Y467 1007 aaPredicted RBP13.06□□□□□ -0.32
PSMC6-202ENST00000458604 ZNF16P17020 682 aaPredicted RBP13.05□□□□□ -0.32
PSMC6-202ENST00000458604 ATP2B4P23634 1241 aa13.05□□□□□ -0.32
PSMC6-202ENST00000458604 SCNN1AP37088 669 aa13.05□□□□□ -0.32
PSMC6-202ENST00000458604 PLPP7Q8NBV4 271 aa13.05□□□□□ -0.32
PSMC6-202ENST00000458604 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
PSMC6-202ENST00000458604 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
PSMC6-202ENST00000458604 KCNH2Q12809 1159 aa13.04□□□□□ -0.32
PSMC6-202ENST00000458604 PTPRNQ16849 979 aa13.04□□□□□ -0.32
PSMC6-202ENST00000458604 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
PSMC6-202ENST00000458604 THAP11Q96EK4 314 aa13.04□□□□□ -0.32
PSMC6-202ENST00000458604 ZFRQ96KR1 1074 aaKnown RBP13.04□□□□□ -0.32
PSMC6-202ENST00000458604 HS3ST6Q96QI5 342 aa13.04□□□□□ -0.32
PSMC6-202ENST00000458604 KRTAP3-3Q9BYR6 98 aa13.04□□□□□ -0.32
PSMC6-202ENST00000458604 KRTAP3-2Q9BYR7 98 aa13.04□□□□□ -0.32
PSMC6-202ENST00000458604 LZTS3O60299 673 aaPredicted RBP13.03□□□□□ -0.32
PSMC6-202ENST00000458604 RNF135Q8IUD6 432 aa13.03□□□□□ -0.32
PSMC6-202ENST00000458604 SIRT1Q96EB6 747 aa13.03□□□□□ -0.32
PSMC6-202ENST00000458604 GPSM3Q9Y4H4 160 aa13.03□□□□□ -0.32
PSMC6-202ENST00000458604 ZCCHC6Q5VYS8 1495 aaKnown RBP13.03□□□□□ -0.32
PSMC6-202ENST00000458604 POTEB3A0JP26 581 aa13.02□□□□□ -0.33
PSMC6-202ENST00000458604 FAM205CA6NFA0 338 aa13.02□□□□□ -0.33
PSMC6-202ENST00000458604 JUNDP17535 347 aa13.02□□□□□ -0.33
PSMC6-202ENST00000458604 DPYDQ12882 1025 aa13.02□□□□□ -0.33
PSMC6-202ENST00000458604 SWI5Q1ZZU3 235 aa13.02□□□□□ -0.33
PSMC6-202ENST00000458604 TRAF7Q6Q0C0 670 aa13.02□□□□□ -0.33
PSMC6-202ENST00000458604 POTEBQ6S5H4 581 aa13.02□□□□□ -0.33
PSMC6-202ENST00000458604 CLDN10P78369 228 aa13.01□□□□□ -0.33
PSMC6-202ENST00000458604 OGFOD1Q8N543 542 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms