RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 USP21Q9UK80 565 aa18.88■□□□□ 0.61
COMMD1-206ENST00000458337 BRD4O60885 1362 aaPredicted RBP18.87■□□□□ 0.61
COMMD1-206ENST00000458337 PUS7Q96PZ0 661 aaKnown RBP18.87■□□□□ 0.61
COMMD1-206ENST00000458337 BCL9LQ86UU0 1499 aa18.86■□□□□ 0.61
COMMD1-206ENST00000458337 SLC24A1O60721 1099 aa18.86■□□□□ 0.61
COMMD1-206ENST00000458337 TESK2Q96S53 571 aa18.86■□□□□ 0.61
COMMD1-206ENST00000458337 ST20-MTHFSA0A0A6YYL1 179 aa18.85■□□□□ 0.61
COMMD1-206ENST00000458337 RBM6P78332 1123 aaKnown RBP18.85■□□□□ 0.61
COMMD1-206ENST00000458337 TRPC5Q9UL62 973 aaPredicted RBP18.85■□□□□ 0.61
COMMD1-206ENST00000458337 ATAD2Q6PL18 1390 aa18.84■□□□□ 0.61
COMMD1-206ENST00000458337 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
COMMD1-206ENST00000458337 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
COMMD1-206ENST00000458337 SLIT2O94813 1529 aa18.84■□□□□ 0.61
COMMD1-206ENST00000458337 HAP1P54257 671 aaPredicted RBP18.83■□□□□ 0.6
COMMD1-206ENST00000458337 CDK12Q9NYV4 1490 aaPredicted RBP18.83■□□□□ 0.6
COMMD1-206ENST00000458337 ATRNO75882 1429 aa18.83■□□□□ 0.6
COMMD1-206ENST00000458337 UNC5CLQ8IV45 518 aa18.82■□□□□ 0.6
COMMD1-206ENST00000458337 ABCA3Q99758 1704 aa18.82■□□□□ 0.6
COMMD1-206ENST00000458337 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
COMMD1-206ENST00000458337 PLEKHG5O94827 1062 aa18.81■□□□□ 0.6
COMMD1-206ENST00000458337 ABTB2Q8N961 1025 aa18.81■□□□□ 0.6
COMMD1-206ENST00000458337 USP6P35125 1406 aa18.81■□□□□ 0.6
COMMD1-206ENST00000458337 CPSF1Q10570 1443 aaKnown RBP18.8■□□□□ 0.6
COMMD1-206ENST00000458337 CRYBG1Q9Y4K1 1723 aa18.8■□□□□ 0.6
COMMD1-206ENST00000458337 NUTM2GQ5VZR2 741 aa18.78■□□□□ 0.6
COMMD1-206ENST00000458337 NLRP13Q86W25 1043 aa18.78■□□□□ 0.6
COMMD1-206ENST00000458337 USP47Q96K76 1375 aa18.78■□□□□ 0.6
COMMD1-206ENST00000458337 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.77■□□□□ 0.6
COMMD1-206ENST00000458337 USP19O94966 1318 aa18.77■□□□□ 0.6
COMMD1-206ENST00000458337 GJD4Q96KN9 370 aaPredicted RBP18.77■□□□□ 0.6
COMMD1-206ENST00000458337 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
COMMD1-206ENST00000458337 TTC21BQ7Z4L5 1316 aa18.75■□□□□ 0.59
COMMD1-206ENST00000458337 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
COMMD1-206ENST00000458337 VPS72Q15906 364 aa18.75■□□□□ 0.59
COMMD1-206ENST00000458337 AKAP12Q02952 1782 aa18.75■□□□□ 0.59
COMMD1-206ENST00000458337 GCP02774 474 aa18.74■□□□□ 0.59
COMMD1-206ENST00000458337 NLRP6P59044 892 aa18.74■□□□□ 0.59
COMMD1-206ENST00000458337 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
COMMD1-206ENST00000458337 CD163L1Q9NR16 1453 aa18.73■□□□□ 0.59
COMMD1-206ENST00000458337 KTN1Q86UP2 1357 aaKnown RBP18.73■□□□□ 0.59
COMMD1-206ENST00000458337 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
COMMD1-206ENST00000458337 BTG4Q9NY30 223 aa18.73■□□□□ 0.59
COMMD1-206ENST00000458337 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
COMMD1-206ENST00000458337 CPDO75976 1380 aa18.72■□□□□ 0.59
COMMD1-206ENST00000458337 KIAA0232Q92628 1395 aa18.72■□□□□ 0.59
COMMD1-206ENST00000458337 ONECUT3O60422 494 aaPredicted RBP18.72■□□□□ 0.59
COMMD1-206ENST00000458337 ZC3H6P61129 1189 aaKnown RBP18.72■□□□□ 0.59
COMMD1-206ENST00000458337 TMF1P82094 1093 aa18.72■□□□□ 0.59
COMMD1-206ENST00000458337 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
COMMD1-206ENST00000458337 RGS12O14924 1447 aa18.72■□□□□ 0.59
COMMD1-206ENST00000458337 PLCH1Q4KWH8 1693 aa18.72■□□□□ 0.59
COMMD1-206ENST00000458337 PHRF1Q9P1Y6 1649 aaKnown RBP18.71■□□□□ 0.59
COMMD1-206ENST00000458337 TERF2IPQ9NYB0 399 aa18.71■□□□□ 0.59
COMMD1-206ENST00000458337 NINLQ9Y2I6 1382 aa18.7■□□□□ 0.58
COMMD1-206ENST00000458337 HDGFL2Q7Z4V5 671 aaPredicted RBP18.7■□□□□ 0.58
COMMD1-206ENST00000458337 CHRNA2Q15822 529 aa18.68■□□□□ 0.58
COMMD1-206ENST00000458337 CDCA8Q53HL2 280 aa18.68■□□□□ 0.58
COMMD1-206ENST00000458337 PIK3C2AO00443 1686 aa18.68■□□□□ 0.58
COMMD1-206ENST00000458337 MON2Q7Z3U7 1717 aa18.68■□□□□ 0.58
COMMD1-206ENST00000458337 GLI3P10071 1580 aa18.68■□□□□ 0.58
COMMD1-206ENST00000458337 USP31Q70CQ4 1352 aa18.68■□□□□ 0.58
COMMD1-206ENST00000458337 NRAPQ86VF7 1730 aa18.67■□□□□ 0.58
COMMD1-206ENST00000458337 SLIT3O75094 1523 aa18.67■□□□□ 0.58
COMMD1-206ENST00000458337 NRKQ7Z2Y5 1582 aa18.67■□□□□ 0.58
COMMD1-206ENST00000458337 A0A1W2PP64 1363 aa18.66■□□□□ 0.58
COMMD1-206ENST00000458337 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
COMMD1-206ENST00000458337 KCNH5Q8NCM2 988 aa18.65■□□□□ 0.58
COMMD1-206ENST00000458337 UPF1Q92900 1129 aaKnown RBP eCLIP18.65■□□□□ 0.58
COMMD1-206ENST00000458337 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
COMMD1-206ENST00000458337 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
COMMD1-206ENST00000458337 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.57
COMMD1-206ENST00000458337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.64■□□□□ 0.57
COMMD1-206ENST00000458337 CAMTA1Q9Y6Y1 1673 aa18.63■□□□□ 0.57
COMMD1-206ENST00000458337 ARHGEF25Q86VW2 580 aa18.63■□□□□ 0.57
COMMD1-206ENST00000458337 ZRANB1Q9UGI0 708 aa18.63■□□□□ 0.57
COMMD1-206ENST00000458337 CCDC9Q9Y3X0 531 aaKnown RBP18.63■□□□□ 0.57
COMMD1-206ENST00000458337 AATKQ6ZMQ8 1374 aa18.63■□□□□ 0.57
COMMD1-206ENST00000458337 NME9Q86XW9 330 aa18.62■□□□□ 0.57
COMMD1-206ENST00000458337 SEPT12Q8IYM1 358 aa18.62■□□□□ 0.57
COMMD1-206ENST00000458337 LMO7Q8WWI1 1683 aa18.62■□□□□ 0.57
COMMD1-206ENST00000458337 ANKRD36BQ8N2N9 1353 aa18.61■□□□□ 0.57
COMMD1-206ENST00000458337 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
COMMD1-206ENST00000458337 SPATA31A1Q5TZJ5 1347 aa18.6■□□□□ 0.57
COMMD1-206ENST00000458337 EVA1CP58658 441 aa18.6■□□□□ 0.57
COMMD1-206ENST00000458337 STRN4Q9NRL3 753 aa18.6■□□□□ 0.57
COMMD1-206ENST00000458337 USP54Q70EL1 1684 aa18.6■□□□□ 0.57
COMMD1-206ENST00000458337 AXIN2Q9Y2T1 843 aa18.59■□□□□ 0.57
COMMD1-206ENST00000458337 COL18A1P39060 1754 aa18.59■□□□□ 0.57
COMMD1-206ENST00000458337 FAM98CQ17RN3 349 aaKnown RBP18.58■□□□□ 0.56
COMMD1-206ENST00000458337 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.56
COMMD1-206ENST00000458337 NFAT5O94916 1531 aa18.58■□□□□ 0.56
COMMD1-206ENST00000458337 COL5A2P05997 1499 aaPredicted RBP18.56■□□□□ 0.56
COMMD1-206ENST00000458337 BRWD3Q6RI45 1802 aa18.56■□□□□ 0.56
COMMD1-206ENST00000458337 FYB1O15117 783 aa18.55■□□□□ 0.56
COMMD1-206ENST00000458337 BARGINQ6ZT62 677 aa18.55■□□□□ 0.56
COMMD1-206ENST00000458337 CARD14Q9BXL6 1004 aa18.55■□□□□ 0.56
COMMD1-206ENST00000458337 OVOS2A0A0J9YW53 1432 aa18.55■□□□□ 0.56
COMMD1-206ENST00000458337 OVOS2Q6IE36 1432 aa18.55■□□□□ 0.56
COMMD1-206ENST00000458337 EP400Q96L91 3159 aa18.54■□□□□ 0.56
COMMD1-206ENST00000458337 KRT27Q7Z3Y8 459 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms