RNA–Protein interactions for RNA: ENST00000458271.6

CSRP1-203, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 1,324 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-203ENST00000458271 USP21Q9UK80 565 aa17.71■□□□□ 0.42
CSRP1-203ENST00000458271 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
CSRP1-203ENST00000458271 PLCH1Q4KWH8 1693 aa17.7■□□□□ 0.42
CSRP1-203ENST00000458271 PLEKHG3A1L390 1219 aa17.7■□□□□ 0.42
CSRP1-203ENST00000458271 QTRT2Q9H974 415 aaKnown RBP17.7■□□□□ 0.42
CSRP1-203ENST00000458271 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.7■□□□□ 0.42
CSRP1-203ENST00000458271 BCL9LQ86UU0 1499 aa17.69■□□□□ 0.42
CSRP1-203ENST00000458271 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
CSRP1-203ENST00000458271 SBNO2Q9Y2G9 1366 aa17.69■□□□□ 0.42
CSRP1-203ENST00000458271 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
CSRP1-203ENST00000458271 SLIT2O94813 1529 aa17.68■□□□□ 0.42
CSRP1-203ENST00000458271 PHRF1Q9P1Y6 1649 aaKnown RBP17.67■□□□□ 0.42
CSRP1-203ENST00000458271 ATRNO75882 1429 aa17.67■□□□□ 0.42
CSRP1-203ENST00000458271 NWD2Q9ULI1 1742 aa17.66■□□□□ 0.42
CSRP1-203ENST00000458271 RGS12O14924 1447 aa17.66■□□□□ 0.42
CSRP1-203ENST00000458271 RBM6P78332 1123 aaKnown RBP17.66■□□□□ 0.42
CSRP1-203ENST00000458271 TRPC5Q9UL62 973 aaPredicted RBP17.66■□□□□ 0.42
CSRP1-203ENST00000458271 CABP1Q9NZU7 370 aa17.65■□□□□ 0.42
CSRP1-203ENST00000458271 AKAP12Q02952 1782 aa17.64■□□□□ 0.41
CSRP1-203ENST00000458271 USP6P35125 1406 aa17.63■□□□□ 0.41
CSRP1-203ENST00000458271 ATAD2Q6PL18 1390 aa17.63■□□□□ 0.41
CSRP1-203ENST00000458271 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
CSRP1-203ENST00000458271 COL14A1Q05707 1796 aaKnown RBP17.63■□□□□ 0.41
CSRP1-203ENST00000458271 NRAPQ86VF7 1730 aa17.62■□□□□ 0.41
CSRP1-203ENST00000458271 NRKQ7Z2Y5 1582 aa17.61■□□□□ 0.41
CSRP1-203ENST00000458271 UNC5CLQ8IV45 518 aa17.61■□□□□ 0.41
CSRP1-203ENST00000458271 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
CSRP1-203ENST00000458271 PIK3C2AO00443 1686 aa17.6■□□□□ 0.41
CSRP1-203ENST00000458271 FAM83GA6ND36 823 aa17.6■□□□□ 0.41
CSRP1-203ENST00000458271 ABTB2Q8N961 1025 aa17.6■□□□□ 0.41
CSRP1-203ENST00000458271 TIMELESSQ9UNS1 1208 aa17.6■□□□□ 0.41
CSRP1-203ENST00000458271 GLI3P10071 1580 aa17.6■□□□□ 0.41
CSRP1-203ENST00000458271 BRD4O60885 1362 aaPredicted RBP17.59■□□□□ 0.41
CSRP1-203ENST00000458271 USP47Q96K76 1375 aa17.59■□□□□ 0.41
CSRP1-203ENST00000458271 MON2Q7Z3U7 1717 aa17.58■□□□□ 0.41
CSRP1-203ENST00000458271 SSH2Q76I76 1423 aa17.58■□□□□ 0.4
CSRP1-203ENST00000458271 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
CSRP1-203ENST00000458271 GJD4Q96KN9 370 aaPredicted RBP17.57■□□□□ 0.4
CSRP1-203ENST00000458271 TESK2Q96S53 571 aa17.57■□□□□ 0.4
CSRP1-203ENST00000458271 EP400Q96L91 3159 aa17.57■□□□□ 0.4
CSRP1-203ENST00000458271 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
CSRP1-203ENST00000458271 USP19O94966 1318 aa17.57■□□□□ 0.4
CSRP1-203ENST00000458271 CPSF1Q10570 1443 aaKnown RBP17.56■□□□□ 0.4
CSRP1-203ENST00000458271 PRDM11Q9NQV5 511 aa17.56■□□□□ 0.4
CSRP1-203ENST00000458271 BTG4Q9NY30 223 aa17.55■□□□□ 0.4
CSRP1-203ENST00000458271 CD163L1Q9NR16 1453 aa17.54■□□□□ 0.4
CSRP1-203ENST00000458271 KTN1Q86UP2 1357 aaKnown RBP17.54■□□□□ 0.4
CSRP1-203ENST00000458271 VPS72Q15906 364 aa17.54■□□□□ 0.4
CSRP1-203ENST00000458271 ZC3H6P61129 1189 aaKnown RBP17.53■□□□□ 0.4
CSRP1-203ENST00000458271 CHRNA2Q15822 529 aa17.53■□□□□ 0.4
CSRP1-203ENST00000458271 NLRP13Q86W25 1043 aa17.53■□□□□ 0.4
CSRP1-203ENST00000458271 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
CSRP1-203ENST00000458271 SLIT3O75094 1523 aa17.53■□□□□ 0.4
CSRP1-203ENST00000458271 TMC1Q8TDI8 760 aa17.52■□□□□ 0.4
CSRP1-203ENST00000458271 CCDC9Q9Y3X0 531 aaKnown RBP17.52■□□□□ 0.4
CSRP1-203ENST00000458271 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
CSRP1-203ENST00000458271 LMO7Q8WWI1 1683 aa17.51■□□□□ 0.39
CSRP1-203ENST00000458271 NLRP6P59044 892 aa17.51■□□□□ 0.39
CSRP1-203ENST00000458271 CPDO75976 1380 aa17.51■□□□□ 0.39
CSRP1-203ENST00000458271 GCP02774 474 aa17.5■□□□□ 0.39
CSRP1-203ENST00000458271 PUS7Q96PZ0 661 aaKnown RBP17.5■□□□□ 0.39
CSRP1-203ENST00000458271 TTC21AQ8NDW8 1320 aa17.5■□□□□ 0.39
CSRP1-203ENST00000458271 BRWD3Q6RI45 1802 aa17.5■□□□□ 0.39
CSRP1-203ENST00000458271 A0A1W2PP64 1363 aa17.5■□□□□ 0.39
CSRP1-203ENST00000458271 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
CSRP1-203ENST00000458271 SLC12A5Q9H2X9 1139 aa17.49■□□□□ 0.39
CSRP1-203ENST00000458271 SLC24A1O60721 1099 aa17.48■□□□□ 0.39
CSRP1-203ENST00000458271 NINLQ9Y2I6 1382 aa17.48■□□□□ 0.39
CSRP1-203ENST00000458271 USP54Q70EL1 1684 aa17.48■□□□□ 0.39
CSRP1-203ENST00000458271 CAMTA1Q9Y6Y1 1673 aa17.48■□□□□ 0.39
CSRP1-203ENST00000458271 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
CSRP1-203ENST00000458271 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
CSRP1-203ENST00000458271 TMF1P82094 1093 aa17.47■□□□□ 0.39
CSRP1-203ENST00000458271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
CSRP1-203ENST00000458271 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
CSRP1-203ENST00000458271 STRN4Q9NRL3 753 aa17.46■□□□□ 0.38
CSRP1-203ENST00000458271 SPATA31A5Q5VU36 1347 aa17.45■□□□□ 0.38
CSRP1-203ENST00000458271 SPATA31A7Q8IWB4 1347 aa17.45■□□□□ 0.38
CSRP1-203ENST00000458271 NFAT5O94916 1531 aa17.45■□□□□ 0.38
CSRP1-203ENST00000458271 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
CSRP1-203ENST00000458271 FAM98CQ17RN3 349 aaKnown RBP17.45■□□□□ 0.38
CSRP1-203ENST00000458271 SEPT12Q8IYM1 358 aa17.45■□□□□ 0.38
CSRP1-203ENST00000458271 THSD7AQ9UPZ6 1657 aa17.44■□□□□ 0.38
CSRP1-203ENST00000458271 ONECUT3O60422 494 aaPredicted RBP17.44■□□□□ 0.38
CSRP1-203ENST00000458271 COL5A2P05997 1499 aaPredicted RBP17.43■□□□□ 0.38
CSRP1-203ENST00000458271 MYOM1P52179 1685 aa17.43■□□□□ 0.38
CSRP1-203ENST00000458271 COL18A1P39060 1754 aa17.43■□□□□ 0.38
CSRP1-203ENST00000458271 A0A0G2JS52 829 aa17.43■□□□□ 0.38
CSRP1-203ENST00000458271 SOX12O15370 315 aa17.43■□□□□ 0.38
CSRP1-203ENST00000458271 MYT1Q01538 1121 aa17.43■□□□□ 0.38
CSRP1-203ENST00000458271 NME9Q86XW9 330 aa17.43■□□□□ 0.38
CSRP1-203ENST00000458271 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
CSRP1-203ENST00000458271 AATKQ6ZMQ8 1374 aa17.42■□□□□ 0.38
CSRP1-203ENST00000458271 USP31Q70CQ4 1352 aa17.42■□□□□ 0.38
CSRP1-203ENST00000458271 SPATA31A1Q5TZJ5 1347 aa17.42■□□□□ 0.38
CSRP1-203ENST00000458271 KCNH5Q8NCM2 988 aa17.42■□□□□ 0.38
CSRP1-203ENST00000458271 ANKRD36BQ8N2N9 1353 aa17.41■□□□□ 0.38
CSRP1-203ENST00000458271 EVA1CP58658 441 aa17.41■□□□□ 0.38
CSRP1-203ENST00000458271 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
CSRP1-203ENST00000458271 LARP1Q6PKG0 1096 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms