RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PSMA5P28066 241 aa23.53■■□□□ 1.36
SNX27-204ENST00000458013 NLRP6P59044 892 aa23.53■■□□□ 1.36
SNX27-204ENST00000458013 ZHX3Q9H4I2 956 aa23.53■■□□□ 1.36
SNX27-204ENST00000458013 HSP90AB4PQ58FF6 505 aa23.52■■□□□ 1.36
SNX27-204ENST00000458013 H0YHG0 523 aa23.52■■□□□ 1.36
SNX27-204ENST00000458013 MYL6BP14649 208 aa23.52■■□□□ 1.36
SNX27-204ENST00000458013 KRT18P05783 430 aaKnown RBP23.51■■□□□ 1.35
SNX27-204ENST00000458013 ACBD3Q9H3P7 528 aa23.5■■□□□ 1.35
SNX27-204ENST00000458013 ABTB2Q8N961 1025 aa23.5■■□□□ 1.35
SNX27-204ENST00000458013 ESCO1Q5FWF5 840 aa23.5■■□□□ 1.35
SNX27-204ENST00000458013 MAGEC2Q9UBF1 373 aaPredicted RBP23.5■■□□□ 1.35
SNX27-204ENST00000458013 XBP1P17861 261 aa23.49■■□□□ 1.35
SNX27-204ENST00000458013 PRKAR2BP31323 418 aa23.49■■□□□ 1.35
SNX27-204ENST00000458013 CNNM1Q9NRU3 951 aa23.49■■□□□ 1.35
SNX27-204ENST00000458013 KIF6Q6ZMV9 814 aa23.49■■□□□ 1.35
SNX27-204ENST00000458013 CNTLNQ9NXG0 1405 aa23.49■■□□□ 1.35
SNX27-204ENST00000458013 MRE11P49959 708 aa23.49■■□□□ 1.35
SNX27-204ENST00000458013 NOM1Q5C9Z4 860 aaKnown RBP23.49■■□□□ 1.35
SNX27-204ENST00000458013 FAM193AP78312 1265 aa23.49■■□□□ 1.35
SNX27-204ENST00000458013 AKNAQ7Z591 1439 aa23.49■■□□□ 1.35
SNX27-204ENST00000458013 TCP11L2Q8N4U5 519 aa23.48■■□□□ 1.35
SNX27-204ENST00000458013 IBSPP21815 317 aaPredicted RBP23.48■■□□□ 1.35
SNX27-204ENST00000458013 AXDND1Q5T1B0 1012 aaPredicted RBP23.48■■□□□ 1.35
SNX27-204ENST00000458013 KINO60870 393 aaKnown RBP23.48■■□□□ 1.35
SNX27-204ENST00000458013 CDR1P51861 262 aa23.47■■□□□ 1.35
SNX27-204ENST00000458013 TBC1D2BQ9UPU7 963 aa23.47■■□□□ 1.35
SNX27-204ENST00000458013 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
SNX27-204ENST00000458013 NUP133Q8WUM0 1156 aa23.47■■□□□ 1.35
SNX27-204ENST00000458013 SERPINC1P01008 464 aa23.46■■□□□ 1.35
SNX27-204ENST00000458013 PTPRGP23470 1445 aa23.46■■□□□ 1.35
SNX27-204ENST00000458013 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
SNX27-204ENST00000458013 MAPK8IP2Q13387 824 aaPredicted RBP23.46■■□□□ 1.35
SNX27-204ENST00000458013 STK38Q15208 465 aa23.45■■□□□ 1.34
SNX27-204ENST00000458013 CLASRPQ8N2M8 674 aaKnown RBP23.45■■□□□ 1.34
SNX27-204ENST00000458013 ANKRD62A6NC57 917 aa23.45■■□□□ 1.34
SNX27-204ENST00000458013 PAF1Q8N7H5 531 aa23.45■■□□□ 1.34
SNX27-204ENST00000458013 TANGO6Q9C0B7 1094 aa23.45■■□□□ 1.34
SNX27-204ENST00000458013 CCDC173Q0VFZ6 552 aa23.44■■□□□ 1.34
SNX27-204ENST00000458013 TWISTNBQ3B726 338 aaPredicted RBP23.44■■□□□ 1.34
SNX27-204ENST00000458013 WASHC2AQ641Q2 1341 aa23.44■■□□□ 1.34
SNX27-204ENST00000458013 SLC4A2P04920 1241 aa23.44■■□□□ 1.34
SNX27-204ENST00000458013 CCDC85AQ96PX6 553 aaPredicted RBP23.43■■□□□ 1.34
SNX27-204ENST00000458013 CENPHQ9H3R5 247 aa23.43■■□□□ 1.34
SNX27-204ENST00000458013 TSPYL1Q9H0U9 437 aa23.43■■□□□ 1.34
SNX27-204ENST00000458013 SART3Q15020 963 aaKnown RBP23.43■■□□□ 1.34
SNX27-204ENST00000458013 DDX54Q8TDD1 881 aaKnown RBP23.43■■□□□ 1.34
SNX27-204ENST00000458013 FAM69CQ0P6D2 419 aa23.42■■□□□ 1.34
SNX27-204ENST00000458013 PPP2R1AP30153 589 aa23.42■■□□□ 1.34
SNX27-204ENST00000458013 NUTM2BA6NNL0 878 aaPredicted RBP23.42■■□□□ 1.34
SNX27-204ENST00000458013 NUTM2EB1AL46 878 aaPredicted RBP23.42■■□□□ 1.34
SNX27-204ENST00000458013 NUTM2AQ8IVF1 878 aaPredicted RBP23.42■■□□□ 1.34
SNX27-204ENST00000458013 SEPT11Q9NVA2 429 aaKnown RBP23.41■■□□□ 1.34
SNX27-204ENST00000458013 NEFHP12036 1026 aa23.4■■□□□ 1.34
SNX27-204ENST00000458013 CFAP70Q5T0N1 1121 aa23.4■■□□□ 1.34
SNX27-204ENST00000458013 C11orf95C9JLR9 678 aaPredicted RBP23.4■■□□□ 1.34
SNX27-204ENST00000458013 SMARCE1Q969G3 411 aa23.4■■□□□ 1.34
SNX27-204ENST00000458013 SYCP1Q15431 976 aa23.4■■□□□ 1.34
SNX27-204ENST00000458013 FILIP1LQ4L180 1135 aa23.4■■□□□ 1.34
SNX27-204ENST00000458013 FKBP4Q02790 459 aaKnown RBP eCLIP23.4■■□□□ 1.34
SNX27-204ENST00000458013 RBM5P52756 815 aaKnown RBP eCLIP23.39■■□□□ 1.34
SNX27-204ENST00000458013 HSP90AB3PQ58FF7 597 aa23.39■■□□□ 1.34
SNX27-204ENST00000458013 CCAR1Q8IX12 1150 aaKnown RBP23.39■■□□□ 1.34
SNX27-204ENST00000458013 ME1P48163 572 aa23.39■■□□□ 1.33
SNX27-204ENST00000458013 TXNDC2Q86VQ3 553 aa23.39■■□□□ 1.33
SNX27-204ENST00000458013 TNMDQ9H2S6 317 aa23.38■■□□□ 1.33
SNX27-204ENST00000458013 GNAI2P04899 355 aa23.38■■□□□ 1.33
SNX27-204ENST00000458013 MIA2Q96PC5 1412 aa23.37■■□□□ 1.33
SNX27-204ENST00000458013 SKAP1Q86WV1 359 aa23.37■■□□□ 1.33
SNX27-204ENST00000458013 CCDC69A6NI79 296 aa23.37■■□□□ 1.33
SNX27-204ENST00000458013 LETM1O95202 739 aaPredicted RBP23.37■■□□□ 1.33
SNX27-204ENST00000458013 CCDC158Q5M9N0 1113 aa23.37■■□□□ 1.33
SNX27-204ENST00000458013 ZNF396Q96N95 335 aaPredicted RBP23.37■■□□□ 1.33
SNX27-204ENST00000458013 PRAM1Q96QH2 718 aa23.37■■□□□ 1.33
SNX27-204ENST00000458013 CWC27Q6UX04 472 aaKnown RBP23.36■■□□□ 1.33
SNX27-204ENST00000458013 DEF6Q9H4E7 631 aa23.36■■□□□ 1.33
SNX27-204ENST00000458013 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
SNX27-204ENST00000458013 CAMK4Q16566 473 aa23.36■■□□□ 1.33
SNX27-204ENST00000458013 RDXP35241 583 aaKnown RBP23.35■■□□□ 1.33
SNX27-204ENST00000458013 BICDL1Q6ZP65 573 aa23.35■■□□□ 1.33
SNX27-204ENST00000458013 XPCQ01831 940 aaPredicted RBP23.35■■□□□ 1.33
SNX27-204ENST00000458013 NBPF1Q3BBV0 1214 aa23.35■■□□□ 1.33
SNX27-204ENST00000458013 TMX1Q9H3N1 280 aa23.34■■□□□ 1.33
SNX27-204ENST00000458013 TXLNAP40222 546 aa23.34■■□□□ 1.33
SNX27-204ENST00000458013 ENOX2Q16206 610 aaKnown RBP23.34■■□□□ 1.33
SNX27-204ENST00000458013 SULT6B1Q6IMI4 303 aa23.34■■□□□ 1.33
SNX27-204ENST00000458013 CCDC191Q8NCU4 936 aa23.34■■□□□ 1.33
SNX27-204ENST00000458013 MIS18AQ9NYP9 233 aa23.34■■□□□ 1.33
SNX27-204ENST00000458013 ERICH4A6NGS2 130 aa23.34■■□□□ 1.33
SNX27-204ENST00000458013 TAX1BP1Q86VP1 789 aa23.34■■□□□ 1.33
SNX27-204ENST00000458013 CYP46A1Q9Y6A2 500 aa23.34■■□□□ 1.33
SNX27-204ENST00000458013 CT47B1P0C2W7 299 aaPredicted RBP23.33■■□□□ 1.33
SNX27-204ENST00000458013 ERCC4Q92889 916 aaPredicted RBP23.33■■□□□ 1.33
SNX27-204ENST00000458013 PDCL3Q9H2J4 239 aa23.33■■□□□ 1.33
SNX27-204ENST00000458013 SSBP05455 408 aaKnown RBP eCLIP23.33■■□□□ 1.33
SNX27-204ENST00000458013 IL1RAPL2Q9NP60 686 aa23.33■■□□□ 1.33
SNX27-204ENST00000458013 GNAI3P08754 354 aa23.33■■□□□ 1.32
SNX27-204ENST00000458013 CABP4P57796 275 aa23.33■■□□□ 1.32
SNX27-204ENST00000458013 DCTN1Q14203 1278 aa23.33■■□□□ 1.32
SNX27-204ENST00000458013 AACSQ86V21 672 aa23.33■■□□□ 1.32
SNX27-204ENST00000458013 UQCRHLA0A096LP55 91 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms