RNA–Protein interactions for RNA: ENST00000457788.5

COL11A2-205, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 5

Gene COL11A2, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-205ENST00000457788 NSD2O96028 1365 aa22.15■■□□□ 1.14
COL11A2-205ENST00000457788 ANKARQ7Z5J8 1434 aa22.15■■□□□ 1.14
COL11A2-205ENST00000457788 MORC1Q86VD1 984 aa22.15■■□□□ 1.14
COL11A2-205ENST00000457788 KIF20BQ96Q89 1820 aa22.14■■□□□ 1.13
COL11A2-205ENST00000457788 PLEKHG3A1L390 1219 aa22.13■■□□□ 1.13
COL11A2-205ENST00000457788 EDC4Q6P2E9 1401 aaKnown RBP22.13■■□□□ 1.13
COL11A2-205ENST00000457788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.13■■□□□ 1.13
COL11A2-205ENST00000457788 ACEP12821 1306 aa22.13■■□□□ 1.13
COL11A2-205ENST00000457788 FYB1O15117 783 aa22.12■■□□□ 1.13
COL11A2-205ENST00000457788 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
COL11A2-205ENST00000457788 ANKRD26Q9UPS8 1709 aa22.12■■□□□ 1.13
COL11A2-205ENST00000457788 PMFBP1Q8TBY8 1022 aa22.11■■□□□ 1.13
COL11A2-205ENST00000457788 ZNF692Q9BU19 519 aaPredicted RBP22.11■■□□□ 1.13
COL11A2-205ENST00000457788 PAK3O75914 559 aaPredicted RBP22.11■■□□□ 1.13
COL11A2-205ENST00000457788 TNNT2P45379 298 aaPredicted RBP22.11■■□□□ 1.13
COL11A2-205ENST00000457788 PNISRQ8TF01 805 aaKnown RBP22.1■■□□□ 1.13
COL11A2-205ENST00000457788 CCDC136Q96JN2 1154 aa22.1■■□□□ 1.13
COL11A2-205ENST00000457788 IL27Q8NEV9 243 aa22.1■■□□□ 1.13
COL11A2-205ENST00000457788 ZBTB47Q9UFB7 747 aaPredicted RBP22.1■■□□□ 1.13
COL11A2-205ENST00000457788 TMEM94Q12767 1356 aa22.1■■□□□ 1.13
COL11A2-205ENST00000457788 HNRNPUQ00839 825 aaKnown RBP eCLIP22.08■■□□□ 1.12
COL11A2-205ENST00000457788 NGDNQ8NEJ9 315 aaKnown RBP22.07■■□□□ 1.12
COL11A2-205ENST00000457788 NRKQ7Z2Y5 1582 aa22.07■■□□□ 1.12
COL11A2-205ENST00000457788 USP6P35125 1406 aa22.06■■□□□ 1.12
COL11A2-205ENST00000457788 POLR3AO14802 1390 aaPredicted RBP22.06■■□□□ 1.12
COL11A2-205ENST00000457788 C19orf44Q9H6X5 657 aa22.06■■□□□ 1.12
COL11A2-205ENST00000457788 ZNF335Q9H4Z2 1342 aaPredicted RBP22.05■■□□□ 1.12
COL11A2-205ENST00000457788 NME9Q86XW9 330 aa22.04■■□□□ 1.12
COL11A2-205ENST00000457788 NCOA3Q9Y6Q9 1424 aa22.03■■□□□ 1.12
COL11A2-205ENST00000457788 DMRT2Q9Y5R5 561 aa22.03■■□□□ 1.12
COL11A2-205ENST00000457788 TTC21BQ7Z4L5 1316 aa22.02■■□□□ 1.12
COL11A2-205ENST00000457788 XIRP1Q702N8 1843 aaKnown RBP22.02■■□□□ 1.12
COL11A2-205ENST00000457788 PHF8Q9UPP1 1060 aa22.02■■□□□ 1.11
COL11A2-205ENST00000457788 ESCO1Q5FWF5 840 aa22.01■■□□□ 1.11
COL11A2-205ENST00000457788 ZRANB1Q9UGI0 708 aa22■■□□□ 1.11
COL11A2-205ENST00000457788 SSH2Q76I76 1423 aa22■■□□□ 1.11
COL11A2-205ENST00000457788 ATF3P18847 181 aa21.99■■□□□ 1.11
COL11A2-205ENST00000457788 LRRC7Q96NW7 1537 aa21.99■■□□□ 1.11
COL11A2-205ENST00000457788 DCCP43146 1447 aa21.99■■□□□ 1.11
COL11A2-205ENST00000457788 MTHFSP49914 203 aa21.99■■□□□ 1.11
COL11A2-205ENST00000457788 IRX6P78412 446 aaPredicted RBP21.97■■□□□ 1.11
COL11A2-205ENST00000457788 COG3Q96JB2 828 aa21.97■■□□□ 1.11
COL11A2-205ENST00000457788 ORAI2Q96SN7 254 aa21.97■■□□□ 1.11
COL11A2-205ENST00000457788 MSH6P52701 1360 aa21.97■■□□□ 1.11
COL11A2-205ENST00000457788 C1orf167Q5SNV9 1468 aa21.96■■□□□ 1.11
COL11A2-205ENST00000457788 TTC21AQ8NDW8 1320 aa21.95■■□□□ 1.11
COL11A2-205ENST00000457788 WDR43Q15061 677 aaKnown RBP eCLIP21.95■■□□□ 1.1
COL11A2-205ENST00000457788 MST1RQ04912 1400 aa21.95■■□□□ 1.1
COL11A2-205ENST00000457788 MAP2P11137 1827 aaKnown RBP21.94■■□□□ 1.1
COL11A2-205ENST00000457788 CADPS2Q86UW7 1296 aa21.94■■□□□ 1.1
COL11A2-205ENST00000457788 ZBED9Q6R2W3 1325 aa21.93■■□□□ 1.1
COL11A2-205ENST00000457788 PPM1GO15355 546 aaPredicted RBP21.93■■□□□ 1.1
COL11A2-205ENST00000457788 FBLN1P23142 703 aa21.93■■□□□ 1.1
COL11A2-205ENST00000457788 OVOS2A0A0J9YW53 1432 aa21.93■■□□□ 1.1
COL11A2-205ENST00000457788 OVOS2Q6IE36 1432 aa21.93■■□□□ 1.1
COL11A2-205ENST00000457788 CFAP53Q96M91 514 aa21.92■■□□□ 1.1
COL11A2-205ENST00000457788 ADAMTS8Q9UP79 889 aa21.92■■□□□ 1.1
COL11A2-205ENST00000457788 PIK3C2AO00443 1686 aa21.92■■□□□ 1.1
COL11A2-205ENST00000457788 B4GALNT3Q6L9W6 998 aa21.92■■□□□ 1.1
COL11A2-205ENST00000457788 RSPH6AQ9H0K4 717 aa21.92■■□□□ 1.1
COL11A2-205ENST00000457788 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.92■■□□□ 1.1
COL11A2-205ENST00000457788 KIF1AQ12756 1690 aa21.91■■□□□ 1.1
COL11A2-205ENST00000457788 PSME1Q06323 249 aa21.91■■□□□ 1.1
COL11A2-205ENST00000457788 SHPRHQ149N8 1683 aa21.91■■□□□ 1.1
COL11A2-205ENST00000457788 FOXO3O43524 673 aa21.91■■□□□ 1.1
COL11A2-205ENST00000457788 SENP3-EIF4A1A0A087X0R7 540 aa21.89■■□□□ 1.1
COL11A2-205ENST00000457788 POLKQ9UBT6 870 aa21.88■■□□□ 1.09
COL11A2-205ENST00000457788 AATKQ6ZMQ8 1374 aa21.88■■□□□ 1.09
COL11A2-205ENST00000457788 BLMP54132 1417 aaPredicted RBP21.87■■□□□ 1.09
COL11A2-205ENST00000457788 ABTB2Q8N961 1025 aa21.87■■□□□ 1.09
COL11A2-205ENST00000457788 INSRP06213 1382 aa21.87■■□□□ 1.09
COL11A2-205ENST00000457788 XPCQ01831 940 aaPredicted RBP21.86■■□□□ 1.09
COL11A2-205ENST00000457788 RTN4Q9NQC3 1192 aaKnown RBP21.86■■□□□ 1.09
COL11A2-205ENST00000457788 USP31Q70CQ4 1352 aa21.86■■□□□ 1.09
COL11A2-205ENST00000457788 NLRP6P59044 892 aa21.86■■□□□ 1.09
COL11A2-205ENST00000457788 PKNOX2Q96KN3 472 aa21.86■■□□□ 1.09
COL11A2-205ENST00000457788 EMILIN1Q9Y6C2 1016 aa21.86■■□□□ 1.09
COL11A2-205ENST00000457788 RRS1Q15050 365 aaKnown RBP21.85■■□□□ 1.09
COL11A2-205ENST00000457788 NUTM2GQ5VZR2 741 aa21.85■■□□□ 1.09
COL11A2-205ENST00000457788 COL3A1P02461 1466 aaPredicted RBP21.85■■□□□ 1.09
COL11A2-205ENST00000457788 MARF1Q9Y4F3 1742 aaKnown RBP21.84■■□□□ 1.09
COL11A2-205ENST00000457788 SOX12O15370 315 aa21.84■■□□□ 1.09
COL11A2-205ENST00000457788 GLIPR1L2Q4G1C9 344 aa21.83■■□□□ 1.09
COL11A2-205ENST00000457788 SMG6Q86US8 1419 aaKnown RBP21.83■■□□□ 1.09
COL11A2-205ENST00000457788 USP54Q70EL1 1684 aa21.83■■□□□ 1.08
COL11A2-205ENST00000457788 PNPLA6Q8IY17 1366 aa21.83■■□□□ 1.08
COL11A2-205ENST00000457788 TRPM3Q9HCF6 1732 aaPredicted RBP21.81■■□□□ 1.08
COL11A2-205ENST00000457788 KRT28Q7Z3Y7 464 aa21.81■■□□□ 1.08
COL11A2-205ENST00000457788 CDK12Q9NYV4 1490 aaPredicted RBP21.81■■□□□ 1.08
COL11A2-205ENST00000457788 RNF123Q5XPI4 1314 aa21.81■■□□□ 1.08
COL11A2-205ENST00000457788 NEFMP07197 916 aa21.8■■□□□ 1.08
COL11A2-205ENST00000457788 DIAPH1O60610 1272 aaKnown RBP21.79■■□□□ 1.08
COL11A2-205ENST00000457788 EIF5BO60841 1220 aaKnown RBP21.79■■□□□ 1.08
COL11A2-205ENST00000457788 CCDC146Q8IYE0 955 aa21.79■■□□□ 1.08
COL11A2-205ENST00000457788 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
COL11A2-205ENST00000457788 SLAIN2Q9P270 581 aa21.79■■□□□ 1.08
COL11A2-205ENST00000457788 NUDCQ9Y266 331 aa21.79■■□□□ 1.08
COL11A2-205ENST00000457788 U2SURPO15042 1029 aaKnown RBP21.78■■□□□ 1.08
COL11A2-205ENST00000457788 U2AF1L5P0DN76 240 aaPredicted RBP21.78■■□□□ 1.08
COL11A2-205ENST00000457788 U2AF1Q01081 240 aaKnown RBP eCLIP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms