RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 ARAP3Q8WWN8 1544 aa17.4■□□□□ 0.38
SYT1-204ENST00000457153 TXNDC2Q86VQ3 553 aa17.4■□□□□ 0.38
SYT1-204ENST00000457153 CDC45O75419 566 aa17.4■□□□□ 0.38
SYT1-204ENST00000457153 KDM5AP29375 1690 aaKnown RBP17.4■□□□□ 0.38
SYT1-204ENST00000457153 SSH1Q8WYL5 1049 aa17.39■□□□□ 0.37
SYT1-204ENST00000457153 MYOM2P54296 1465 aa17.39■□□□□ 0.37
SYT1-204ENST00000457153 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
SYT1-204ENST00000457153 MAGI2Q86UL8 1455 aa17.38■□□□□ 0.37
SYT1-204ENST00000457153 KCNJ4P48050 445 aa17.38■□□□□ 0.37
SYT1-204ENST00000457153 SKAP1Q86WV1 359 aa17.38■□□□□ 0.37
SYT1-204ENST00000457153 ZCCHC11Q5TAX3 1644 aaKnown RBP17.38■□□□□ 0.37
SYT1-204ENST00000457153 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
SYT1-204ENST00000457153 FRAT2O75474 233 aaPredicted RBP17.37■□□□□ 0.37
SYT1-204ENST00000457153 PTMAP06454 111 aaKnown RBP17.37■□□□□ 0.37
SYT1-204ENST00000457153 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
SYT1-204ENST00000457153 IFT57Q9NWB7 429 aa17.37■□□□□ 0.37
SYT1-204ENST00000457153 TSPYL4Q9UJ04 414 aa17.37■□□□□ 0.37
SYT1-204ENST00000457153 IGHDP01880 384 aa17.36■□□□□ 0.37
SYT1-204ENST00000457153 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
SYT1-204ENST00000457153 CDC42BPBQ9Y5S2 1711 aa17.36■□□□□ 0.37
SYT1-204ENST00000457153 CHD1LQ86WJ1 897 aa17.36■□□□□ 0.37
SYT1-204ENST00000457153 GAS2L2Q8NHY3 880 aa17.36■□□□□ 0.37
SYT1-204ENST00000457153 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
SYT1-204ENST00000457153 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
SYT1-204ENST00000457153 KDM2BQ8NHM5 1336 aa17.35■□□□□ 0.37
SYT1-204ENST00000457153 NAP1L5Q96NT1 182 aaPredicted RBP17.34■□□□□ 0.37
SYT1-204ENST00000457153 SYAP1Q96A49 352 aaPredicted RBP17.34■□□□□ 0.37
SYT1-204ENST00000457153 FYB1O15117 783 aa17.33■□□□□ 0.37
SYT1-204ENST00000457153 TRIM27P14373 513 aa17.33■□□□□ 0.37
SYT1-204ENST00000457153 LTV1Q96GA3 475 aaPredicted RBP17.33■□□□□ 0.37
SYT1-204ENST00000457153 POGZQ7Z3K3 1410 aa17.33■□□□□ 0.36
SYT1-204ENST00000457153 LAMC1P11047 1609 aa17.33■□□□□ 0.36
SYT1-204ENST00000457153 WASLO00401 505 aaPredicted RBP17.33■□□□□ 0.36
SYT1-204ENST00000457153 FBXO31Q5XUX0 539 aaPredicted RBP17.33■□□□□ 0.36
SYT1-204ENST00000457153 TET3O43151 1660 aa17.33■□□□□ 0.36
SYT1-204ENST00000457153 SULT6B1Q6IMI4 303 aa17.33■□□□□ 0.36
SYT1-204ENST00000457153 ZFYVE16Q7Z3T8 1539 aa17.32■□□□□ 0.36
SYT1-204ENST00000457153 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
SYT1-204ENST00000457153 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
SYT1-204ENST00000457153 C8orf34Q49A92 452 aa17.32■□□□□ 0.36
SYT1-204ENST00000457153 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
SYT1-204ENST00000457153 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
SYT1-204ENST00000457153 NUCB2P80303 420 aa17.31■□□□□ 0.36
SYT1-204ENST00000457153 HDAC1Q13547 482 aaPredicted RBP17.31■□□□□ 0.36
SYT1-204ENST00000457153 MSNP26038 577 aaKnown RBP17.31■□□□□ 0.36
SYT1-204ENST00000457153 FKBP5Q13451 457 aaPredicted RBP17.31■□□□□ 0.36
SYT1-204ENST00000457153 GNAI3P08754 354 aa17.3■□□□□ 0.36
SYT1-204ENST00000457153 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
SYT1-204ENST00000457153 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
SYT1-204ENST00000457153 ERVK-7P63135 1459 aa17.29■□□□□ 0.36
SYT1-204ENST00000457153 ZNF521Q96K83 1311 aa17.29■□□□□ 0.36
SYT1-204ENST00000457153 TEFQ10587 303 aa17.29■□□□□ 0.36
SYT1-204ENST00000457153 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
SYT1-204ENST00000457153 NEO1Q92859 1461 aa17.29■□□□□ 0.36
SYT1-204ENST00000457153 NPATQ14207 1427 aa17.29■□□□□ 0.36
SYT1-204ENST00000457153 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
SYT1-204ENST00000457153 TRMT2AQ8IZ69 625 aaKnown RBP17.28■□□□□ 0.36
SYT1-204ENST00000457153 ARHGAP45Q92619 1136 aa17.28■□□□□ 0.36
SYT1-204ENST00000457153 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
SYT1-204ENST00000457153 CIZ1Q9ULV3 898 aaPredicted RBP17.28■□□□□ 0.36
SYT1-204ENST00000457153 RABEP1Q15276 862 aa17.28■□□□□ 0.36
SYT1-204ENST00000457153 CCT4P50991 539 aaKnown RBP17.28■□□□□ 0.36
SYT1-204ENST00000457153 NLRP6P59044 892 aa17.28■□□□□ 0.36
SYT1-204ENST00000457153 PCDHB15Q9Y5E8 787 aa17.28■□□□□ 0.36
SYT1-204ENST00000457153 RILPL2Q969X0 211 aa17.27■□□□□ 0.36
SYT1-204ENST00000457153 A0A1W2PP64 1363 aa17.27■□□□□ 0.36
SYT1-204ENST00000457153 RRS1Q15050 365 aaKnown RBP17.27■□□□□ 0.35
SYT1-204ENST00000457153 C1orf115Q9H7X2 142 aa17.26■□□□□ 0.35
SYT1-204ENST00000457153 HSP90AB4PQ58FF6 505 aa17.26■□□□□ 0.35
SYT1-204ENST00000457153 C1orf141Q5JVX7 400 aa17.26■□□□□ 0.35
SYT1-204ENST00000457153 THEMISQ8N1K5 641 aaPredicted RBP17.26■□□□□ 0.35
SYT1-204ENST00000457153 NME9Q86XW9 330 aa17.26■□□□□ 0.35
SYT1-204ENST00000457153 TBC1D32Q96NH3 1257 aa17.26■□□□□ 0.35
SYT1-204ENST00000457153 KIF1BO60333 1816 aa17.25■□□□□ 0.35
SYT1-204ENST00000457153 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
SYT1-204ENST00000457153 MLH3Q9UHC1 1453 aa17.25■□□□□ 0.35
SYT1-204ENST00000457153 FGD1P98174 961 aa17.25■□□□□ 0.35
SYT1-204ENST00000457153 TRAK2O60296 914 aa17.25■□□□□ 0.35
SYT1-204ENST00000457153 EMILIN1Q9Y6C2 1016 aa17.25■□□□□ 0.35
SYT1-204ENST00000457153 YTHDC2Q9H6S0 1430 aaKnown RBP17.25■□□□□ 0.35
SYT1-204ENST00000457153 ERCC6L2Q5T890 1561 aa17.25■□□□□ 0.35
SYT1-204ENST00000457153 MRE11P49959 708 aa17.24■□□□□ 0.35
SYT1-204ENST00000457153 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
SYT1-204ENST00000457153 GOLGA6L4A6NEF3 574 aa17.24■□□□□ 0.35
SYT1-204ENST00000457153 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
SYT1-204ENST00000457153 GNAI2P04899 355 aa17.23■□□□□ 0.35
SYT1-204ENST00000457153 PHF14O94880 888 aa17.23■□□□□ 0.35
SYT1-204ENST00000457153 RUFY2Q8WXA3 655 aa17.23■□□□□ 0.35
SYT1-204ENST00000457153 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
SYT1-204ENST00000457153 SPHKAPQ2M3C7 1700 aa17.22■□□□□ 0.35
SYT1-204ENST00000457153 MCM4P33991 863 aa17.21■□□□□ 0.35
SYT1-204ENST00000457153 MCM2P49736 904 aa17.21■□□□□ 0.35
SYT1-204ENST00000457153 BMP2KLQ5H9B9 411 aa17.21■□□□□ 0.35
SYT1-204ENST00000457153 RSPH6AQ9H0K4 717 aa17.21■□□□□ 0.35
SYT1-204ENST00000457153 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
SYT1-204ENST00000457153 MADDQ8WXG6 1647 aa17.21■□□□□ 0.35
SYT1-204ENST00000457153 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.35
SYT1-204ENST00000457153 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.35
SYT1-204ENST00000457153 UBTFL1P0CB47 393 aaPredicted RBP17.21■□□□□ 0.35
SYT1-204ENST00000457153 PSME1Q06323 249 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms