RNA–Protein interactions for RNA: ENST00000457023.1

CAPN7-205, Transcript of calpain 7, humanhuman

TSL 3

Gene CAPN7, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-205ENST00000457023 ZRANB1Q9UGI0 708 aa36.56■■■■□ 3.44
CAPN7-205ENST00000457023 BLMP54132 1417 aaPredicted RBP36.56■■■■□ 3.44
CAPN7-205ENST00000457023 BRWD3Q6RI45 1802 aa36.53■■■■□ 3.44
CAPN7-205ENST00000457023 KRT27Q7Z3Y8 459 aa36.53■■■■□ 3.44
CAPN7-205ENST00000457023 CCDC61Q9Y6R9 512 aa36.53■■■■□ 3.44
CAPN7-205ENST00000457023 COL14A1Q05707 1796 aaKnown RBP36.52■■■■□ 3.44
CAPN7-205ENST00000457023 POLR3AO14802 1390 aaPredicted RBP36.52■■■■□ 3.44
CAPN7-205ENST00000457023 PLEKHG3A1L390 1219 aa36.51■■■■□ 3.44
CAPN7-205ENST00000457023 NRAPQ86VF7 1730 aa36.51■■■■□ 3.43
CAPN7-205ENST00000457023 NBPF8Q3BBV2 869 aa36.5■■■■□ 3.43
CAPN7-205ENST00000457023 ITSN1Q15811 1721 aa36.5■■■■□ 3.43
CAPN7-205ENST00000457023 ACEP12821 1306 aa36.49■■■■□ 3.43
CAPN7-205ENST00000457023 CRYBG1Q9Y4K1 1723 aa36.48■■■■□ 3.43
CAPN7-205ENST00000457023 FAM98CQ17RN3 349 aaKnown RBP36.47■■■■□ 3.43
CAPN7-205ENST00000457023 SPATA31A5Q5VU36 1347 aa36.45■■■■□ 3.43
CAPN7-205ENST00000457023 SPATA31A7Q8IWB4 1347 aa36.45■■■■□ 3.43
CAPN7-205ENST00000457023 PRDM11Q9NQV5 511 aa36.45■■■■□ 3.43
CAPN7-205ENST00000457023 SF3B2Q13435 895 aaKnown RBP36.42■■■■□ 3.42
CAPN7-205ENST00000457023 DEFB132Q7Z7B7 95 aa36.42■■■■□ 3.42
CAPN7-205ENST00000457023 TOPAZ1Q8N9V7 1692 aa36.42■■■■□ 3.42
CAPN7-205ENST00000457023 KIAA0232Q92628 1395 aa36.4■■■■□ 3.42
CAPN7-205ENST00000457023 CENPJQ9HC77 1338 aaPredicted RBP36.4■■■■□ 3.42
CAPN7-205ENST00000457023 A0A0G2JS52 829 aa36.39■■■■□ 3.42
CAPN7-205ENST00000457023 MYT1Q01538 1121 aa36.39■■■■□ 3.42
CAPN7-205ENST00000457023 L3MBTL2Q969R5 705 aa36.39■■■■□ 3.42
CAPN7-205ENST00000457023 NUTM2GQ5VZR2 741 aa36.38■■■■□ 3.41
CAPN7-205ENST00000457023 ZC3H6P61129 1189 aaKnown RBP36.35■■■■□ 3.41
CAPN7-205ENST00000457023 SRPK2P78362 688 aaKnown RBP36.35■■■■□ 3.41
CAPN7-205ENST00000457023 CHRNA2Q15822 529 aa36.35■■■■□ 3.41
CAPN7-205ENST00000457023 ABTB2Q8N961 1025 aa36.34■■■■□ 3.41
CAPN7-205ENST00000457023 CABP2Q9NPB3 220 aa36.33■■■■□ 3.41
CAPN7-205ENST00000457023 SPATA31A1Q5TZJ5 1347 aa36.33■■■■□ 3.41
CAPN7-205ENST00000457023 PHRF1Q9P1Y6 1649 aaKnown RBP36.32■■■■□ 3.4
CAPN7-205ENST00000457023 SIN3AQ96ST3 1273 aa36.31■■■■□ 3.4
CAPN7-205ENST00000457023 PPIP5K1Q6PFW1 1433 aa36.31■■■■□ 3.4
CAPN7-205ENST00000457023 SRCAPQ6ZRS2 3230 aa36.28■■■■□ 3.4
CAPN7-205ENST00000457023 USP19O94966 1318 aa36.28■■■■□ 3.4
CAPN7-205ENST00000457023 THSD7AQ9UPZ6 1657 aa36.27■■■■□ 3.4
CAPN7-205ENST00000457023 STRN4Q9NRL3 753 aa36.27■■■■□ 3.4
CAPN7-205ENST00000457023 BRD4O60885 1362 aaPredicted RBP36.27■■■■□ 3.4
CAPN7-205ENST00000457023 NLRP13Q86W25 1043 aa36.26■■■■□ 3.4
CAPN7-205ENST00000457023 BAG6P46379 1132 aa36.25■■■■□ 3.39
CAPN7-205ENST00000457023 FAM182BQ5T319 152 aa36.25■■■■□ 3.39
CAPN7-205ENST00000457023 CPDO75976 1380 aa36.25■■■■□ 3.39
CAPN7-205ENST00000457023 CABP1Q9NZU7 370 aa36.24■■■■□ 3.39
CAPN7-205ENST00000457023 GCP02774 474 aa36.23■■■■□ 3.39
CAPN7-205ENST00000457023 EVA1CP58658 441 aa36.22■■■■□ 3.39
CAPN7-205ENST00000457023 NRKQ7Z2Y5 1582 aa36.21■■■■□ 3.39
CAPN7-205ENST00000457023 QRICH2Q9H0J4 1663 aa36.2■■■■□ 3.39
CAPN7-205ENST00000457023 BARGINQ6ZT62 677 aa36.2■■■■□ 3.39
CAPN7-205ENST00000457023 CAMTA1Q9Y6Y1 1673 aa36.19■■■■□ 3.38
CAPN7-205ENST00000457023 SSH2Q76I76 1423 aa36.19■■■■□ 3.38
CAPN7-205ENST00000457023 NEUROD1Q13562 356 aa36.19■■■■□ 3.38
CAPN7-205ENST00000457023 EVC2Q86UK5 1308 aa36.17■■■■□ 3.38
CAPN7-205ENST00000457023 LARP1Q6PKG0 1096 aaKnown RBP36.16■■■■□ 3.38
CAPN7-205ENST00000457023 USP6P35125 1406 aa36.16■■■■□ 3.38
CAPN7-205ENST00000457023 TRPM1Q7Z4N2 1603 aa36.16■■■■□ 3.38
CAPN7-205ENST00000457023 USP35Q9P2H5 1018 aa36.15■■■■□ 3.38
CAPN7-205ENST00000457023 EN1Q05925 392 aaPredicted RBP36.14■■■■□ 3.38
CAPN7-205ENST00000457023 LMO7Q8WWI1 1683 aa36.13■■■■□ 3.37
CAPN7-205ENST00000457023 FAM196AQ6ZSG2 479 aa36.13■■■■□ 3.37
CAPN7-205ENST00000457023 ROCK2O75116 1388 aaKnown RBP36.12■■■■□ 3.37
CAPN7-205ENST00000457023 DISP2A7MBM2 1401 aa36.11■■■■□ 3.37
CAPN7-205ENST00000457023 NLRP6P59044 892 aa36.11■■■■□ 3.37
CAPN7-205ENST00000457023 TCP11L2Q8N4U5 519 aa36.11■■■■□ 3.37
CAPN7-205ENST00000457023 THRAP3Q9Y2W1 955 aaKnown RBP36.1■■■■□ 3.37
CAPN7-205ENST00000457023 RGPD1P0DJD0 1748 aa36.1■■■■□ 3.37
CAPN7-205ENST00000457023 ZNF692Q9BU19 519 aaPredicted RBP36.08■■■■□ 3.37
CAPN7-205ENST00000457023 TRIM37O94972 964 aa36.05■■■■□ 3.36
CAPN7-205ENST00000457023 PDE3BQ13370 1112 aa36.05■■■■□ 3.36
CAPN7-205ENST00000457023 COL5A2P05997 1499 aaPredicted RBP36.05■■■■□ 3.36
CAPN7-205ENST00000457023 SLIT3O75094 1523 aa36.04■■■■□ 3.36
CAPN7-205ENST00000457023 AATKQ6ZMQ8 1374 aa36.03■■■■□ 3.36
CAPN7-205ENST00000457023 PSDA5PKW4 1024 aaPredicted RBP36.02■■■■□ 3.36
CAPN7-205ENST00000457023 CAMKK2Q96RR4 588 aa36.02■■■■□ 3.36
CAPN7-205ENST00000457023 TNS1Q9HBL0 1735 aaKnown RBP36.01■■■■□ 3.36
CAPN7-205ENST00000457023 EZH2Q15910 746 aaKnown RBP36.01■■■■□ 3.36
CAPN7-205ENST00000457023 TTC21BQ7Z4L5 1316 aa36■■■■□ 3.35
CAPN7-205ENST00000457023 CRB1P82279 1406 aa35.99■■■■□ 3.35
CAPN7-205ENST00000457023 APBA3O96018 575 aa35.96■■■■□ 3.35
CAPN7-205ENST00000457023 CPSF1Q10570 1443 aaKnown RBP35.96■■■■□ 3.35
CAPN7-205ENST00000457023 PIK3C2AO00443 1686 aa35.96■■■■□ 3.35
CAPN7-205ENST00000457023 ZBTB7CA1YPR0 619 aa35.95■■■■□ 3.35
CAPN7-205ENST00000457023 TTC21AQ8NDW8 1320 aa35.94■■■■□ 3.34
CAPN7-205ENST00000457023 AXIN2Q9Y2T1 843 aa35.94■■■■□ 3.34
CAPN7-205ENST00000457023 ARHGEF25Q86VW2 580 aa35.93■■■■□ 3.34
CAPN7-205ENST00000457023 KCNH5Q8NCM2 988 aa35.93■■■■□ 3.34
CAPN7-205ENST00000457023 LRP5O75197 1615 aa35.93■■■■□ 3.34
CAPN7-205ENST00000457023 PARD3Q8TEW0 1356 aa35.92■■■■□ 3.34
CAPN7-205ENST00000457023 SBNO2Q9Y2G9 1366 aa35.92■■■■□ 3.34
CAPN7-205ENST00000457023 R3HDM1Q15032 1099 aaKnown RBP35.91■■■■□ 3.34
CAPN7-205ENST00000457023 COL18A1P39060 1754 aa35.89■■■■□ 3.34
CAPN7-205ENST00000457023 C11orf95C9JLR9 678 aaPredicted RBP35.89■■■■□ 3.34
CAPN7-205ENST00000457023 CARD11Q9BXL7 1154 aa35.89■■■■□ 3.34
CAPN7-205ENST00000457023 TOM1L2Q6ZVM7 507 aa35.88■■■■□ 3.33
CAPN7-205ENST00000457023 AKAP12Q02952 1782 aa35.88■■■■□ 3.33
CAPN7-205ENST00000457023 PARP4Q9UKK3 1724 aaKnown RBP35.88■■■■□ 3.33
CAPN7-205ENST00000457023 KTN1Q86UP2 1357 aaKnown RBP35.88■■■■□ 3.33
CAPN7-205ENST00000457023 WDR17Q8IZU2 1322 aa35.86■■■■□ 3.33
CAPN7-205ENST00000457023 DDB1Q16531 1140 aa35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms