RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ST20-MTHFSA0A0A6YYL1 179 aa25.45■■□□□ 1.66
PDLIM2-215ENST00000456545 SLC24A1O60721 1099 aa25.45■■□□□ 1.66
PDLIM2-215ENST00000456545 ABTB2Q8N961 1025 aa25.45■■□□□ 1.66
PDLIM2-215ENST00000456545 NUTM2GQ5VZR2 741 aa25.44■■□□□ 1.66
PDLIM2-215ENST00000456545 TRPC5Q9UL62 973 aaPredicted RBP25.44■■□□□ 1.66
PDLIM2-215ENST00000456545 ATAD2Q6PL18 1390 aa25.44■■□□□ 1.66
PDLIM2-215ENST00000456545 SBNO2Q9Y2G9 1366 aa25.44■■□□□ 1.66
PDLIM2-215ENST00000456545 MARF1Q9Y4F3 1742 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-215ENST00000456545 RBM6P78332 1123 aaKnown RBP25.42■■□□□ 1.66
PDLIM2-215ENST00000456545 TMC1Q8TDI8 760 aa25.41■■□□□ 1.66
PDLIM2-215ENST00000456545 ZNF692Q9BU19 519 aaPredicted RBP25.41■■□□□ 1.66
PDLIM2-215ENST00000456545 ALS2Q96Q42 1657 aa25.41■■□□□ 1.66
PDLIM2-215ENST00000456545 NLRP13Q86W25 1043 aa25.38■■□□□ 1.65
PDLIM2-215ENST00000456545 BRD4O60885 1362 aaPredicted RBP25.37■■□□□ 1.65
PDLIM2-215ENST00000456545 USP47Q96K76 1375 aa25.37■■□□□ 1.65
PDLIM2-215ENST00000456545 UNC5CLQ8IV45 518 aa25.37■■□□□ 1.65
PDLIM2-215ENST00000456545 FAM83GA6ND36 823 aa25.36■■□□□ 1.65
PDLIM2-215ENST00000456545 TMF1P82094 1093 aa25.34■■□□□ 1.65
PDLIM2-215ENST00000456545 TESK2Q96S53 571 aa25.34■■□□□ 1.65
PDLIM2-215ENST00000456545 PRDM11Q9NQV5 511 aa25.34■■□□□ 1.65
PDLIM2-215ENST00000456545 CCDC9Q9Y3X0 531 aaKnown RBP25.34■■□□□ 1.65
PDLIM2-215ENST00000456545 USP6P35125 1406 aa25.34■■□□□ 1.65
PDLIM2-215ENST00000456545 NLRP6P59044 892 aa25.33■■□□□ 1.65
PDLIM2-215ENST00000456545 HDGFL2Q7Z4V5 671 aaPredicted RBP25.33■■□□□ 1.65
PDLIM2-215ENST00000456545 PUS7Q96PZ0 661 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-215ENST00000456545 ABCA3Q99758 1704 aa25.33■■□□□ 1.65
PDLIM2-215ENST00000456545 BCL9LQ86UU0 1499 aa25.33■■□□□ 1.65
PDLIM2-215ENST00000456545 ZC3H6P61129 1189 aaKnown RBP25.32■■□□□ 1.64
PDLIM2-215ENST00000456545 KTN1Q86UP2 1357 aaKnown RBP25.31■■□□□ 1.64
PDLIM2-215ENST00000456545 SLC12A5Q9H2X9 1139 aa25.31■■□□□ 1.64
PDLIM2-215ENST00000456545 TERF2IPQ9NYB0 399 aa25.31■■□□□ 1.64
PDLIM2-215ENST00000456545 ATRNO75882 1429 aa25.3■■□□□ 1.64
PDLIM2-215ENST00000456545 GJD4Q96KN9 370 aaPredicted RBP25.3■■□□□ 1.64
PDLIM2-215ENST00000456545 BTG4Q9NY30 223 aa25.3■■□□□ 1.64
PDLIM2-215ENST00000456545 SLIT2O94813 1529 aa25.3■■□□□ 1.64
PDLIM2-215ENST00000456545 TTC21BQ7Z4L5 1316 aa25.29■■□□□ 1.64
PDLIM2-215ENST00000456545 CDCA8Q53HL2 280 aa25.28■■□□□ 1.64
PDLIM2-215ENST00000456545 CDK12Q9NYV4 1490 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-215ENST00000456545 ZBTB7CA1YPR0 619 aa25.26■■□□□ 1.63
PDLIM2-215ENST00000456545 GCP02774 474 aa25.26■■□□□ 1.63
PDLIM2-215ENST00000456545 CHRNA2Q15822 529 aa25.26■■□□□ 1.63
PDLIM2-215ENST00000456545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.26■■□□□ 1.63
PDLIM2-215ENST00000456545 TTC21AQ8NDW8 1320 aa25.26■■□□□ 1.63
PDLIM2-215ENST00000456545 KIAA0232Q92628 1395 aa25.26■■□□□ 1.63
PDLIM2-215ENST00000456545 VPS72Q15906 364 aa25.25■■□□□ 1.63
PDLIM2-215ENST00000456545 CPSF1Q10570 1443 aaKnown RBP25.25■■□□□ 1.63
PDLIM2-215ENST00000456545 PLCH1Q4KWH8 1693 aa25.25■■□□□ 1.63
PDLIM2-215ENST00000456545 AKAP12Q02952 1782 aa25.25■■□□□ 1.63
PDLIM2-215ENST00000456545 COL14A1Q05707 1796 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-215ENST00000456545 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.23■■□□□ 1.63
PDLIM2-215ENST00000456545 NWD2Q9ULI1 1742 aa25.23■■□□□ 1.63
PDLIM2-215ENST00000456545 CRYBG1Q9Y4K1 1723 aa25.23■■□□□ 1.63
PDLIM2-215ENST00000456545 PHRF1Q9P1Y6 1649 aaKnown RBP25.23■■□□□ 1.63
PDLIM2-215ENST00000456545 USP19O94966 1318 aa25.23■■□□□ 1.63
PDLIM2-215ENST00000456545 EVA1CP58658 441 aa25.23■■□□□ 1.63
PDLIM2-215ENST00000456545 SSH2Q76I76 1423 aa25.22■■□□□ 1.63
PDLIM2-215ENST00000456545 EIF4G2P78344 907 aaKnown RBP eCLIP25.22■■□□□ 1.63
PDLIM2-215ENST00000456545 RGS12O14924 1447 aa25.21■■□□□ 1.63
PDLIM2-215ENST00000456545 STRN4Q9NRL3 753 aa25.21■■□□□ 1.63
PDLIM2-215ENST00000456545 NINLQ9Y2I6 1382 aa25.2■■□□□ 1.63
PDLIM2-215ENST00000456545 SOX12O15370 315 aa25.2■■□□□ 1.62
PDLIM2-215ENST00000456545 A0A0G2JS52 829 aa25.19■■□□□ 1.62
PDLIM2-215ENST00000456545 MYT1Q01538 1121 aa25.19■■□□□ 1.62
PDLIM2-215ENST00000456545 KCNH5Q8NCM2 988 aa25.19■■□□□ 1.62
PDLIM2-215ENST00000456545 POLR3GLQ9BT43 218 aa25.17■■□□□ 1.62
PDLIM2-215ENST00000456545 MON2Q7Z3U7 1717 aa25.16■■□□□ 1.62
PDLIM2-215ENST00000456545 PIK3C2AO00443 1686 aa25.16■■□□□ 1.62
PDLIM2-215ENST00000456545 A0A1W2PP64 1363 aa25.16■■□□□ 1.62
PDLIM2-215ENST00000456545 CPDO75976 1380 aa25.16■■□□□ 1.62
PDLIM2-215ENST00000456545 CD163L1Q9NR16 1453 aa25.15■■□□□ 1.62
PDLIM2-215ENST00000456545 NRKQ7Z2Y5 1582 aa25.15■■□□□ 1.62
PDLIM2-215ENST00000456545 EDC4Q6P2E9 1401 aaKnown RBP25.15■■□□□ 1.62
PDLIM2-215ENST00000456545 HSPA5P11021 654 aaKnown RBP25.15■■□□□ 1.62
PDLIM2-215ENST00000456545 NME9Q86XW9 330 aa25.15■■□□□ 1.62
PDLIM2-215ENST00000456545 SEPT12Q8IYM1 358 aa25.13■■□□□ 1.61
PDLIM2-215ENST00000456545 ZRANB1Q9UGI0 708 aa25.13■■□□□ 1.61
PDLIM2-215ENST00000456545 FAM98CQ17RN3 349 aaKnown RBP25.12■■□□□ 1.61
PDLIM2-215ENST00000456545 GLI3P10071 1580 aa25.12■■□□□ 1.61
PDLIM2-215ENST00000456545 NRAPQ86VF7 1730 aa25.11■■□□□ 1.61
PDLIM2-215ENST00000456545 SPATA31A5Q5VU36 1347 aa25.11■■□□□ 1.61
PDLIM2-215ENST00000456545 SPATA31A7Q8IWB4 1347 aa25.11■■□□□ 1.61
PDLIM2-215ENST00000456545 UPF1Q92900 1129 aaKnown RBP eCLIP25.1■■□□□ 1.61
PDLIM2-215ENST00000456545 USP35Q9P2H5 1018 aa25.1■■□□□ 1.61
PDLIM2-215ENST00000456545 SLIT3O75094 1523 aa25.1■■□□□ 1.61
PDLIM2-215ENST00000456545 ANKRD36BQ8N2N9 1353 aa25.09■■□□□ 1.61
PDLIM2-215ENST00000456545 USP31Q70CQ4 1352 aa25.08■■□□□ 1.61
PDLIM2-215ENST00000456545 ONECUT3O60422 494 aaPredicted RBP25.07■■□□□ 1.6
PDLIM2-215ENST00000456545 ARHGEF25Q86VW2 580 aa25.07■■□□□ 1.6
PDLIM2-215ENST00000456545 COG3Q96JB2 828 aa25.07■■□□□ 1.6
PDLIM2-215ENST00000456545 AATKQ6ZMQ8 1374 aa25.06■■□□□ 1.6
PDLIM2-215ENST00000456545 LARP1Q6PKG0 1096 aaKnown RBP25.06■■□□□ 1.6
PDLIM2-215ENST00000456545 CAMTA1Q9Y6Y1 1673 aa25.06■■□□□ 1.6
PDLIM2-215ENST00000456545 SPATA31A1Q5TZJ5 1347 aa25.06■■□□□ 1.6
PDLIM2-215ENST00000456545 CSB-PGBD3P0DP91 1061 aa25.03■■□□□ 1.6
PDLIM2-215ENST00000456545 KRT27Q7Z3Y8 459 aa25.03■■□□□ 1.6
PDLIM2-215ENST00000456545 TOM1L2Q6ZVM7 507 aa25.02■■□□□ 1.6
PDLIM2-215ENST00000456545 TCP11L2Q8N4U5 519 aa25.01■■□□□ 1.59
PDLIM2-215ENST00000456545 AXIN2Q9Y2T1 843 aa25.01■■□□□ 1.59
PDLIM2-215ENST00000456545 LMO7Q8WWI1 1683 aa25.01■■□□□ 1.59
PDLIM2-215ENST00000456545 COL5A2P05997 1499 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms