RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
SMCR2-201ENST00000456090 COL14A1Q05707 1796 aaKnown RBP17.89■□□□□ 0.45
SMCR2-201ENST00000456090 SIN3AQ96ST3 1273 aa17.89■□□□□ 0.45
SMCR2-201ENST00000456090 FAM83GA6ND36 823 aa17.88■□□□□ 0.45
SMCR2-201ENST00000456090 SRCAPQ6ZRS2 3230 aa17.88■□□□□ 0.45
SMCR2-201ENST00000456090 PHRF1Q9P1Y6 1649 aaKnown RBP17.87■□□□□ 0.45
SMCR2-201ENST00000456090 NEUROD1Q13562 356 aa17.87■□□□□ 0.45
SMCR2-201ENST00000456090 VPS72Q15906 364 aa17.86■□□□□ 0.45
SMCR2-201ENST00000456090 CCDC61Q9Y6R9 512 aa17.86■□□□□ 0.45
SMCR2-201ENST00000456090 CENPJQ9HC77 1338 aaPredicted RBP17.86■□□□□ 0.45
SMCR2-201ENST00000456090 POLR3AO14802 1390 aaPredicted RBP17.85■□□□□ 0.45
SMCR2-201ENST00000456090 CCDC9Q9Y3X0 531 aaKnown RBP17.85■□□□□ 0.45
SMCR2-201ENST00000456090 ACEP12821 1306 aa17.84■□□□□ 0.45
SMCR2-201ENST00000456090 SRPK2P78362 688 aaKnown RBP17.83■□□□□ 0.44
SMCR2-201ENST00000456090 BTG4Q9NY30 223 aa17.83■□□□□ 0.44
SMCR2-201ENST00000456090 NBPF8Q3BBV2 869 aa17.82■□□□□ 0.44
SMCR2-201ENST00000456090 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
SMCR2-201ENST00000456090 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
SMCR2-201ENST00000456090 SEPT12Q8IYM1 358 aa17.81■□□□□ 0.44
SMCR2-201ENST00000456090 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
SMCR2-201ENST00000456090 NUTM2GQ5VZR2 741 aa17.8■□□□□ 0.44
SMCR2-201ENST00000456090 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
SMCR2-201ENST00000456090 PRDM11Q9NQV5 511 aa17.79■□□□□ 0.44
SMCR2-201ENST00000456090 ONECUT3O60422 494 aaPredicted RBP17.78■□□□□ 0.44
SMCR2-201ENST00000456090 NRKQ7Z2Y5 1582 aa17.78■□□□□ 0.44
SMCR2-201ENST00000456090 KIAA0232Q92628 1395 aa17.78■□□□□ 0.44
SMCR2-201ENST00000456090 CCDC125Q86Z20 511 aa17.77■□□□□ 0.44
SMCR2-201ENST00000456090 A0A0G2JS52 829 aa17.76■□□□□ 0.43
SMCR2-201ENST00000456090 MYT1Q01538 1121 aa17.76■□□□□ 0.43
SMCR2-201ENST00000456090 FAM98CQ17RN3 349 aaKnown RBP17.76■□□□□ 0.43
SMCR2-201ENST00000456090 ABTB2Q8N961 1025 aa17.76■□□□□ 0.43
SMCR2-201ENST00000456090 ZC3H6P61129 1189 aaKnown RBP17.75■□□□□ 0.43
SMCR2-201ENST00000456090 CHRNA2Q15822 529 aa17.75■□□□□ 0.43
SMCR2-201ENST00000456090 KRT27Q7Z3Y8 459 aa17.75■□□□□ 0.43
SMCR2-201ENST00000456090 AKAP12Q02952 1782 aa17.74■□□□□ 0.43
SMCR2-201ENST00000456090 CABP1Q9NZU7 370 aa17.74■□□□□ 0.43
SMCR2-201ENST00000456090 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
SMCR2-201ENST00000456090 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
SMCR2-201ENST00000456090 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
SMCR2-201ENST00000456090 BLMP54132 1417 aaPredicted RBP17.73■□□□□ 0.43
SMCR2-201ENST00000456090 THSD7AQ9UPZ6 1657 aa17.73■□□□□ 0.43
SMCR2-201ENST00000456090 USP6P35125 1406 aa17.72■□□□□ 0.43
SMCR2-201ENST00000456090 PIK3C2AO00443 1686 aa17.71■□□□□ 0.43
SMCR2-201ENST00000456090 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.43
SMCR2-201ENST00000456090 BRD4O60885 1362 aaPredicted RBP17.71■□□□□ 0.43
SMCR2-201ENST00000456090 STRN4Q9NRL3 753 aa17.71■□□□□ 0.43
SMCR2-201ENST00000456090 USP19O94966 1318 aa17.71■□□□□ 0.42
SMCR2-201ENST00000456090 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
SMCR2-201ENST00000456090 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
SMCR2-201ENST00000456090 CAMTA1Q9Y6Y1 1673 aa17.69■□□□□ 0.42
SMCR2-201ENST00000456090 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
SMCR2-201ENST00000456090 SPATA31A1Q5TZJ5 1347 aa17.69■□□□□ 0.42
SMCR2-201ENST00000456090 CPDO75976 1380 aa17.68■□□□□ 0.42
SMCR2-201ENST00000456090 GCP02774 474 aa17.68■□□□□ 0.42
SMCR2-201ENST00000456090 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
SMCR2-201ENST00000456090 SSH2Q76I76 1423 aa17.67■□□□□ 0.42
SMCR2-201ENST00000456090 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
SMCR2-201ENST00000456090 ZRANB1Q9UGI0 708 aa17.67■□□□□ 0.42
SMCR2-201ENST00000456090 MON2Q7Z3U7 1717 aa17.67■□□□□ 0.42
SMCR2-201ENST00000456090 EVA1CP58658 441 aa17.66■□□□□ 0.42
SMCR2-201ENST00000456090 NLRP6P59044 892 aa17.66■□□□□ 0.42
SMCR2-201ENST00000456090 DEFB132Q7Z7B7 95 aa17.66■□□□□ 0.42
SMCR2-201ENST00000456090 CARD11Q9BXL7 1154 aa17.66■□□□□ 0.42
SMCR2-201ENST00000456090 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
SMCR2-201ENST00000456090 SLIT3O75094 1523 aa17.66■□□□□ 0.42
SMCR2-201ENST00000456090 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
SMCR2-201ENST00000456090 FAM182BQ5T319 152 aa17.65■□□□□ 0.42
SMCR2-201ENST00000456090 TNS1Q9HBL0 1735 aaKnown RBP17.64■□□□□ 0.41
SMCR2-201ENST00000456090 SBNO2Q9Y2G9 1366 aa17.64■□□□□ 0.41
SMCR2-201ENST00000456090 LARP1Q6PKG0 1096 aaKnown RBP17.63■□□□□ 0.41
SMCR2-201ENST00000456090 COL18A1P39060 1754 aa17.63■□□□□ 0.41
SMCR2-201ENST00000456090 COL5A2P05997 1499 aaPredicted RBP17.63■□□□□ 0.41
SMCR2-201ENST00000456090 ZBTB7CA1YPR0 619 aa17.62■□□□□ 0.41
SMCR2-201ENST00000456090 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
SMCR2-201ENST00000456090 CPSF1Q10570 1443 aaKnown RBP17.62■□□□□ 0.41
SMCR2-201ENST00000456090 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
SMCR2-201ENST00000456090 PARP4Q9UKK3 1724 aaKnown RBP17.61■□□□□ 0.41
SMCR2-201ENST00000456090 BARGINQ6ZT62 677 aa17.6■□□□□ 0.41
SMCR2-201ENST00000456090 KTN1Q86UP2 1357 aaKnown RBP17.6■□□□□ 0.41
SMCR2-201ENST00000456090 BAG6P46379 1132 aa17.59■□□□□ 0.41
SMCR2-201ENST00000456090 TCP11L2Q8N4U5 519 aa17.59■□□□□ 0.41
SMCR2-201ENST00000456090 WNK3Q9BYP7 1800 aa17.58■□□□□ 0.41
SMCR2-201ENST00000456090 AATKQ6ZMQ8 1374 aa17.58■□□□□ 0.4
SMCR2-201ENST00000456090 TTC21AQ8NDW8 1320 aa17.58■□□□□ 0.4
SMCR2-201ENST00000456090 CRB1P82279 1406 aa17.57■□□□□ 0.4
SMCR2-201ENST00000456090 USP54Q70EL1 1684 aa17.57■□□□□ 0.4
SMCR2-201ENST00000456090 LTN1O94822 1766 aa17.56■□□□□ 0.4
SMCR2-201ENST00000456090 SOX12O15370 315 aa17.56■□□□□ 0.4
SMCR2-201ENST00000456090 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
SMCR2-201ENST00000456090 FAM196AQ6ZSG2 479 aa17.56■□□□□ 0.4
SMCR2-201ENST00000456090 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
SMCR2-201ENST00000456090 CD163L1Q9NR16 1453 aa17.56■□□□□ 0.4
SMCR2-201ENST00000456090 EN1Q05925 392 aaPredicted RBP17.55■□□□□ 0.4
SMCR2-201ENST00000456090 KCNH5Q8NCM2 988 aa17.55■□□□□ 0.4
SMCR2-201ENST00000456090 TMC1Q8TDI8 760 aa17.55■□□□□ 0.4
SMCR2-201ENST00000456090 NFAT5O94916 1531 aa17.55■□□□□ 0.4
SMCR2-201ENST00000456090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMCR2-201ENST00000456090 LRRC37A3O60309 1634 aa17.54■□□□□ 0.4
SMCR2-201ENST00000456090 SBF2Q86WG5 1849 aa17.54■□□□□ 0.4
SMCR2-201ENST00000456090 TRIM37O94972 964 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms