RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 CRYBG1Q9Y4K1 1723 aa34.48■■■■□ 3.11
PTPRA-208ENST00000455631 SPATA31A5Q5VU36 1347 aa34.48■■■■□ 3.11
PTPRA-208ENST00000455631 SPATA31A7Q8IWB4 1347 aa34.48■■■■□ 3.11
PTPRA-208ENST00000455631 R3HDM1Q15032 1099 aaKnown RBP34.47■■■■□ 3.11
PTPRA-208ENST00000455631 ACIN1Q9UKV3 1341 aaKnown RBP34.47■■■■□ 3.11
PTPRA-208ENST00000455631 EIF3AQ14152 1382 aaKnown RBP34.46■■■■□ 3.11
PTPRA-208ENST00000455631 TULP4Q9NRJ4 1543 aa34.45■■■■□ 3.11
PTPRA-208ENST00000455631 DISP2A7MBM2 1401 aa34.45■■■■□ 3.11
PTPRA-208ENST00000455631 ADGRB1O14514 1584 aa34.45■■■■□ 3.1
PTPRA-208ENST00000455631 PRR36Q9H6K5 1346 aa34.44■■■■□ 3.1
PTPRA-208ENST00000455631 TRAK1Q9UPV9 953 aa34.43■■■■□ 3.1
PTPRA-208ENST00000455631 MINK1Q8N4C8 1332 aaPredicted RBP34.43■■■■□ 3.1
PTPRA-208ENST00000455631 PRDM11Q9NQV5 511 aa34.42■■■■□ 3.1
PTPRA-208ENST00000455631 PAK3O75914 559 aaPredicted RBP34.4■■■■□ 3.1
PTPRA-208ENST00000455631 EZH2Q15910 746 aaKnown RBP34.38■■■■□ 3.09
PTPRA-208ENST00000455631 NGDNQ8NEJ9 315 aaKnown RBP34.38■■■■□ 3.09
PTPRA-208ENST00000455631 WASLO00401 505 aaPredicted RBP34.34■■■■□ 3.09
PTPRA-208ENST00000455631 SPATA31A1Q5TZJ5 1347 aa34.33■■■■□ 3.09
PTPRA-208ENST00000455631 ITSN1Q15811 1721 aa34.33■■■■□ 3.09
PTPRA-208ENST00000455631 TRIM37O94972 964 aa34.33■■■■□ 3.09
PTPRA-208ENST00000455631 KIAA0232Q92628 1395 aa34.33■■■■□ 3.09
PTPRA-208ENST00000455631 PHRF1Q9P1Y6 1649 aaKnown RBP34.33■■■■□ 3.09
PTPRA-208ENST00000455631 STRN4Q9NRL3 753 aa34.31■■■■□ 3.08
PTPRA-208ENST00000455631 FAM196AQ6ZSG2 479 aa34.3■■■■□ 3.08
PTPRA-208ENST00000455631 CHRNA2Q15822 529 aa34.29■■■■□ 3.08
PTPRA-208ENST00000455631 CAMKK2Q96RR4 588 aa34.29■■■■□ 3.08
PTPRA-208ENST00000455631 ATP7BP35670 1465 aa34.26■■■■□ 3.07
PTPRA-208ENST00000455631 PARD3Q8TEW0 1356 aa34.25■■■■□ 3.07
PTPRA-208ENST00000455631 APBA3O96018 575 aa34.25■■■■□ 3.07
PTPRA-208ENST00000455631 KDM2AQ9Y2K7 1162 aa34.25■■■■□ 3.07
PTPRA-208ENST00000455631 USP35Q9P2H5 1018 aa34.24■■■■□ 3.07
PTPRA-208ENST00000455631 RREB1Q92766 1687 aa34.24■■■■□ 3.07
PTPRA-208ENST00000455631 ARHGEF28Q8N1W1 1705 aaKnown RBP34.24■■■■□ 3.07
PTPRA-208ENST00000455631 ZC3H6P61129 1189 aaKnown RBP34.22■■■■□ 3.07
PTPRA-208ENST00000455631 NUP188Q5SRE5 1749 aa34.21■■■■□ 3.07
PTPRA-208ENST00000455631 NUTM2GQ5VZR2 741 aa34.2■■■■□ 3.07
PTPRA-208ENST00000455631 DCAF11Q8TEB1 546 aa34.19■■■■□ 3.06
PTPRA-208ENST00000455631 NUDT16Q96DE0 195 aaKnown RBP34.19■■■■□ 3.06
PTPRA-208ENST00000455631 SSH2Q76I76 1423 aa34.18■■■■□ 3.06
PTPRA-208ENST00000455631 EVA1CP58658 441 aa34.17■■■■□ 3.06
PTPRA-208ENST00000455631 PDE3BQ13370 1112 aa34.17■■■■□ 3.06
PTPRA-208ENST00000455631 NRKQ7Z2Y5 1582 aa34.15■■■■□ 3.06
PTPRA-208ENST00000455631 BARGINQ6ZT62 677 aa34.15■■■■□ 3.06
PTPRA-208ENST00000455631 RAB3GAP2Q9H2M9 1393 aa34.13■■■■□ 3.05
PTPRA-208ENST00000455631 TOPAZ1Q8N9V7 1692 aa34.13■■■■□ 3.05
PTPRA-208ENST00000455631 NBPF8Q3BBV2 869 aa34.11■■■■□ 3.05
PTPRA-208ENST00000455631 NBPF14Q5TI25 921 aa34.11■■■■□ 3.05
PTPRA-208ENST00000455631 CAMTA1Q9Y6Y1 1673 aa34.11■■■■□ 3.05
PTPRA-208ENST00000455631 YY1P25490 414 aa34.09■■■■□ 3.05
PTPRA-208ENST00000455631 LARP1Q6PKG0 1096 aaKnown RBP34.09■■■■□ 3.05
PTPRA-208ENST00000455631 POLR3AO14802 1390 aaPredicted RBP34.09■■■■□ 3.05
PTPRA-208ENST00000455631 LMO7Q8WWI1 1683 aa34.09■■■■□ 3.05
PTPRA-208ENST00000455631 TCP11L2Q8N4U5 519 aa34.08■■■■□ 3.05
PTPRA-208ENST00000455631 CDK19Q9BWU1 502 aa34.08■■■■□ 3.05
PTPRA-208ENST00000455631 ACEP12821 1306 aa34.07■■■■□ 3.05
PTPRA-208ENST00000455631 STAC3Q96MF2 364 aa34.05■■■■□ 3.04
PTPRA-208ENST00000455631 ABTB2Q8N961 1025 aa34.04■■■■□ 3.04
PTPRA-208ENST00000455631 PPP1R1BQ9UD71 204 aaPredicted RBP34.04■■■■□ 3.04
PTPRA-208ENST00000455631 CPDO75976 1380 aa34.03■■■■□ 3.04
PTPRA-208ENST00000455631 PARP4Q9UKK3 1724 aaKnown RBP34.03■■■■□ 3.04
PTPRA-208ENST00000455631 CCDC61Q9Y6R9 512 aa34.02■■■■□ 3.04
PTPRA-208ENST00000455631 SPON1Q9HCB6 807 aa34■■■■□ 3.03
PTPRA-208ENST00000455631 USP19O94966 1318 aa34■■■■□ 3.03
PTPRA-208ENST00000455631 THRAP3Q9Y2W1 955 aaKnown RBP33.99■■■■□ 3.03
PTPRA-208ENST00000455631 COL5A2P05997 1499 aaPredicted RBP33.98■■■■□ 3.03
PTPRA-208ENST00000455631 PLEKHG3A1L390 1219 aa33.97■■■■□ 3.03
PTPRA-208ENST00000455631 KCNQ2O43526 872 aa33.95■■■■□ 3.03
PTPRA-208ENST00000455631 NINLQ9Y2I6 1382 aa33.94■■■■□ 3.02
PTPRA-208ENST00000455631 DCAF8L1A6NGE4 600 aa33.93■■■■□ 3.02
PTPRA-208ENST00000455631 NLRP13Q86W25 1043 aa33.93■■■■□ 3.02
PTPRA-208ENST00000455631 OVOS2A0A0G2JMS6 1433 aa33.93■■■■□ 3.02
PTPRA-208ENST00000455631 OVOS2A0A0J9YW53 1432 aa33.93■■■■□ 3.02
PTPRA-208ENST00000455631 OVOS2Q6IE36 1432 aa33.93■■■■□ 3.02
PTPRA-208ENST00000455631 RGPD3A6NKT7 1758 aaPredicted RBP33.93■■■■□ 3.02
PTPRA-208ENST00000455631 RGPD4Q7Z3J3 1758 aa33.93■■■■□ 3.02
PTPRA-208ENST00000455631 GCP02774 474 aa33.92■■■■□ 3.02
PTPRA-208ENST00000455631 PEAK1Q9H792 1746 aa33.92■■■■□ 3.02
PTPRA-208ENST00000455631 LRRC37A3O60309 1634 aa33.91■■■■□ 3.02
PTPRA-208ENST00000455631 CRB1P82279 1406 aa33.91■■■■□ 3.02
PTPRA-208ENST00000455631 C11orf95C9JLR9 678 aaPredicted RBP33.91■■■■□ 3.02
PTPRA-208ENST00000455631 ZBTB7CA1YPR0 619 aa33.9■■■■□ 3.02
PTPRA-208ENST00000455631 PPIP5K1Q6PFW1 1433 aa33.89■■■■□ 3.02
PTPRA-208ENST00000455631 SBF2Q86WG5 1849 aa33.89■■■■□ 3.02
PTPRA-208ENST00000455631 KIAA1210Q9ULL0 1709 aa33.89■■■■□ 3.02
PTPRA-208ENST00000455631 SRPK2P78362 688 aaKnown RBP33.86■■■■□ 3.01
PTPRA-208ENST00000455631 CASZ1Q86V15 1759 aa33.84■■■■□ 3.01
PTPRA-208ENST00000455631 ANO8Q9HCE9 1232 aaPredicted RBP33.82■■■■□ 3
PTPRA-208ENST00000455631 WNK3Q9BYP7 1800 aa33.81■■■■□ 3
PTPRA-208ENST00000455631 PLSCR1O15162 318 aa33.81■■■■□ 3
PTPRA-208ENST00000455631 DDB1Q16531 1140 aa33.81■■■■□ 3
PTPRA-208ENST00000455631 SLIT3O75094 1523 aa33.79■■■■□ 3
PTPRA-208ENST00000455631 TOM1L2Q6ZVM7 507 aa33.79■■■■□ 3
PTPRA-208ENST00000455631 CABP2Q9NPB3 220 aa33.79■■■■□ 3
PTPRA-208ENST00000455631 BRD4O60885 1362 aaPredicted RBP33.79■■■■□ 3
PTPRA-208ENST00000455631 AATKQ6ZMQ8 1374 aa33.79■■■■□ 3
PTPRA-208ENST00000455631 NLRP6P59044 892 aa33.77■■■■□ 3
PTPRA-208ENST00000455631 AKAP12Q02952 1782 aa33.77■■■■□ 3
PTPRA-208ENST00000455631 USP6P35125 1406 aa33.77■■■■□ 3
PTPRA-208ENST00000455631 NBPF1Q3BBV0 1214 aa33.76■■■□□ 2.99
PTPRA-208ENST00000455631 BCL11BQ9C0K0 894 aaPredicted RBP33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms