RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 KRT27Q7Z3Y8 459 aa25.67■■□□□ 1.7
CCDC144B-204ENST00000455629 BTG4Q9NY30 223 aa25.67■■□□□ 1.7
CCDC144B-204ENST00000455629 SF3B2Q13435 895 aaKnown RBP25.66■■□□□ 1.7
CCDC144B-204ENST00000455629 ATP7BP35670 1465 aa25.66■■□□□ 1.7
CCDC144B-204ENST00000455629 CRYBG1Q9Y4K1 1723 aa25.66■■□□□ 1.7
CCDC144B-204ENST00000455629 PAK3O75914 559 aaPredicted RBP25.64■■□□□ 1.7
CCDC144B-204ENST00000455629 NUDT16Q96DE0 195 aaKnown RBP25.64■■□□□ 1.7
CCDC144B-204ENST00000455629 KIAA1210Q9ULL0 1709 aa25.63■■□□□ 1.69
CCDC144B-204ENST00000455629 A0A0G2JS52 829 aa25.61■■□□□ 1.69
CCDC144B-204ENST00000455629 MYT1Q01538 1121 aa25.61■■□□□ 1.69
CCDC144B-204ENST00000455629 FAM98CQ17RN3 349 aaKnown RBP25.6■■□□□ 1.69
CCDC144B-204ENST00000455629 DEFB132Q7Z7B7 95 aa25.6■■□□□ 1.69
CCDC144B-204ENST00000455629 CDK19Q9BWU1 502 aa25.59■■□□□ 1.69
CCDC144B-204ENST00000455629 PRDM11Q9NQV5 511 aa25.59■■□□□ 1.69
CCDC144B-204ENST00000455629 SPATA31A5Q5VU36 1347 aa25.58■■□□□ 1.69
CCDC144B-204ENST00000455629 SPATA31A7Q8IWB4 1347 aa25.58■■□□□ 1.69
CCDC144B-204ENST00000455629 POLR3AO14802 1390 aaPredicted RBP25.56■■□□□ 1.68
CCDC144B-204ENST00000455629 TOPAZ1Q8N9V7 1692 aa25.56■■□□□ 1.68
CCDC144B-204ENST00000455629 CCDC61Q9Y6R9 512 aa25.56■■□□□ 1.68
CCDC144B-204ENST00000455629 PHRF1Q9P1Y6 1649 aaKnown RBP25.54■■□□□ 1.68
CCDC144B-204ENST00000455629 KIAA0232Q92628 1395 aa25.53■■□□□ 1.68
CCDC144B-204ENST00000455629 THSD7AQ9UPZ6 1657 aa25.52■■□□□ 1.68
CCDC144B-204ENST00000455629 PLEKHG3A1L390 1219 aa25.52■■□□□ 1.68
CCDC144B-204ENST00000455629 BAG6P46379 1132 aa25.52■■□□□ 1.68
CCDC144B-204ENST00000455629 ACEP12821 1306 aa25.52■■□□□ 1.68
CCDC144B-204ENST00000455629 NBPF8Q3BBV2 869 aa25.51■■□□□ 1.67
CCDC144B-204ENST00000455629 RGPD1P0DJD0 1748 aa25.49■■□□□ 1.67
CCDC144B-204ENST00000455629 NBPF1Q3BBV0 1214 aa25.49■■□□□ 1.67
CCDC144B-204ENST00000455629 SPATA31A1Q5TZJ5 1347 aa25.48■■□□□ 1.67
CCDC144B-204ENST00000455629 CHRNA2Q15822 529 aa25.47■■□□□ 1.67
CCDC144B-204ENST00000455629 NUTM2GQ5VZR2 741 aa25.47■■□□□ 1.67
CCDC144B-204ENST00000455629 ZC3H6P61129 1189 aaKnown RBP25.46■■□□□ 1.67
CCDC144B-204ENST00000455629 TRIM26Q12899 539 aaPredicted RBP25.46■■□□□ 1.67
CCDC144B-204ENST00000455629 ABTB2Q8N961 1025 aa25.45■■□□□ 1.66
CCDC144B-204ENST00000455629 CENPJQ9HC77 1338 aaPredicted RBP25.44■■□□□ 1.66
CCDC144B-204ENST00000455629 STRN4Q9NRL3 753 aa25.44■■□□□ 1.66
CCDC144B-204ENST00000455629 NRKQ7Z2Y5 1582 aa25.44■■□□□ 1.66
CCDC144B-204ENST00000455629 SRPK2P78362 688 aaKnown RBP25.43■■□□□ 1.66
CCDC144B-204ENST00000455629 FAM182BQ5T319 152 aa25.43■■□□□ 1.66
CCDC144B-204ENST00000455629 PPIP5K1Q6PFW1 1433 aa25.43■■□□□ 1.66
CCDC144B-204ENST00000455629 CPDO75976 1380 aa25.43■■□□□ 1.66
CCDC144B-204ENST00000455629 DISP2A7MBM2 1401 aa25.42■■□□□ 1.66
CCDC144B-204ENST00000455629 LRP5O75197 1615 aa25.41■■□□□ 1.66
CCDC144B-204ENST00000455629 USP19O94966 1318 aa25.41■■□□□ 1.66
CCDC144B-204ENST00000455629 EVA1CP58658 441 aa25.41■■□□□ 1.66
CCDC144B-204ENST00000455629 BRD4O60885 1362 aaPredicted RBP25.41■■□□□ 1.66
CCDC144B-204ENST00000455629 SSH2Q76I76 1423 aa25.4■■□□□ 1.66
CCDC144B-204ENST00000455629 TNS1Q9HBL0 1735 aaKnown RBP25.4■■□□□ 1.66
CCDC144B-204ENST00000455629 QRICH2Q9H0J4 1663 aa25.39■■□□□ 1.66
CCDC144B-204ENST00000455629 EN1Q05925 392 aaPredicted RBP25.39■■□□□ 1.66
CCDC144B-204ENST00000455629 FAM196AQ6ZSG2 479 aa25.39■■□□□ 1.66
CCDC144B-204ENST00000455629 BARGINQ6ZT62 677 aa25.39■■□□□ 1.66
CCDC144B-204ENST00000455629 NLRP13Q86W25 1043 aa25.39■■□□□ 1.66
CCDC144B-204ENST00000455629 CABP2Q9NPB3 220 aa25.38■■□□□ 1.65
CCDC144B-204ENST00000455629 LMO7Q8WWI1 1683 aa25.38■■□□□ 1.65
CCDC144B-204ENST00000455629 CAMTA1Q9Y6Y1 1673 aa25.38■■□□□ 1.65
CCDC144B-204ENST00000455629 USP35Q9P2H5 1018 aa25.37■■□□□ 1.65
CCDC144B-204ENST00000455629 PSDA5PKW4 1024 aaPredicted RBP25.35■■□□□ 1.65
CCDC144B-204ENST00000455629 GCP02774 474 aa25.35■■□□□ 1.65
CCDC144B-204ENST00000455629 LARP1Q6PKG0 1096 aaKnown RBP25.34■■□□□ 1.65
CCDC144B-204ENST00000455629 L3MBTL2Q969R5 705 aa25.34■■□□□ 1.65
CCDC144B-204ENST00000455629 TCP11L2Q8N4U5 519 aa25.33■■□□□ 1.65
CCDC144B-204ENST00000455629 USP6P35125 1406 aa25.32■■□□□ 1.64
CCDC144B-204ENST00000455629 TRIM37O94972 964 aa25.32■■□□□ 1.64
CCDC144B-204ENST00000455629 PDE3BQ13370 1112 aa25.32■■□□□ 1.64
CCDC144B-204ENST00000455629 CABP1Q9NZU7 370 aa25.32■■□□□ 1.64
CCDC144B-204ENST00000455629 THRAP3Q9Y2W1 955 aaKnown RBP25.32■■□□□ 1.64
CCDC144B-204ENST00000455629 PARD3Q8TEW0 1356 aa25.31■■□□□ 1.64
CCDC144B-204ENST00000455629 EVC2Q86UK5 1308 aa25.3■■□□□ 1.64
CCDC144B-204ENST00000455629 TRPM1Q7Z4N2 1603 aa25.3■■□□□ 1.64
CCDC144B-204ENST00000455629 COL5A2P05997 1499 aaPredicted RBP25.29■■□□□ 1.64
CCDC144B-204ENST00000455629 EZH2Q15910 746 aaKnown RBP25.29■■□□□ 1.64
CCDC144B-204ENST00000455629 CAMKK2Q96RR4 588 aa25.29■■□□□ 1.64
CCDC144B-204ENST00000455629 NLRP6P59044 892 aa25.27■■□□□ 1.64
CCDC144B-204ENST00000455629 SLIT3O75094 1523 aa25.27■■□□□ 1.64
CCDC144B-204ENST00000455629 APBA3O96018 575 aa25.26■■□□□ 1.63
CCDC144B-204ENST00000455629 R3HDM1Q15032 1099 aaKnown RBP25.26■■□□□ 1.63
CCDC144B-204ENST00000455629 AATKQ6ZMQ8 1374 aa25.26■■□□□ 1.63
CCDC144B-204ENST00000455629 PARP4Q9UKK3 1724 aaKnown RBP25.26■■□□□ 1.63
CCDC144B-204ENST00000455629 CRB1P82279 1406 aa25.25■■□□□ 1.63
CCDC144B-204ENST00000455629 C11orf95C9JLR9 678 aaPredicted RBP25.24■■□□□ 1.63
CCDC144B-204ENST00000455629 SIN3AQ96ST3 1273 aa25.24■■□□□ 1.63
CCDC144B-204ENST00000455629 PIK3C2AO00443 1686 aa25.23■■□□□ 1.63
CCDC144B-204ENST00000455629 ROCK2O75116 1388 aaKnown RBP25.23■■□□□ 1.63
CCDC144B-204ENST00000455629 ZNF692Q9BU19 519 aaPredicted RBP25.22■■□□□ 1.63
CCDC144B-204ENST00000455629 RREB1Q92766 1687 aa25.2■■□□□ 1.63
CCDC144B-204ENST00000455629 ZBTB7CA1YPR0 619 aa25.2■■□□□ 1.62
CCDC144B-204ENST00000455629 NEUROD1Q13562 356 aa25.19■■□□□ 1.62
CCDC144B-204ENST00000455629 COL18A1P39060 1754 aa25.18■■□□□ 1.62
CCDC144B-204ENST00000455629 AKAP12Q02952 1782 aa25.18■■□□□ 1.62
CCDC144B-204ENST00000455629 PCGF6Q9BYE7 350 aa25.18■■□□□ 1.62
CCDC144B-204ENST00000455629 TTC21BQ7Z4L5 1316 aa25.16■■□□□ 1.62
CCDC144B-204ENST00000455629 TTC21AQ8NDW8 1320 aa25.16■■□□□ 1.62
CCDC144B-204ENST00000455629 OVOS2A0A0G2JMS6 1433 aa25.16■■□□□ 1.62
CCDC144B-204ENST00000455629 OVOS2A0A0J9YW53 1432 aa25.16■■□□□ 1.62
CCDC144B-204ENST00000455629 NUP188Q5SRE5 1749 aa25.16■■□□□ 1.62
CCDC144B-204ENST00000455629 OVOS2Q6IE36 1432 aa25.16■■□□□ 1.62
CCDC144B-204ENST00000455629 TOM1L2Q6ZVM7 507 aa25.16■■□□□ 1.62
CCDC144B-204ENST00000455629 KCNH5Q8NCM2 988 aa25.16■■□□□ 1.62
CCDC144B-204ENST00000455629 CPSF1Q10570 1443 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms