RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 PPP1R3GB7ZBB8 358 aa10.92□□□□□ -0.66
LSMEM1-203ENST00000455302 TOM1O60784 492 aa10.92□□□□□ -0.66
LSMEM1-203ENST00000455302 MCM6Q14566 821 aa10.92□□□□□ -0.66
LSMEM1-203ENST00000455302 ZMYM3Q14202 1370 aa10.91□□□□□ -0.66
LSMEM1-203ENST00000455302 POTEMA6NI47 508 aa10.91□□□□□ -0.66
LSMEM1-203ENST00000455302 NBPF26B4DH59 902 aa10.91□□□□□ -0.66
LSMEM1-203ENST00000455302 APBB1O00213 710 aa10.91□□□□□ -0.66
LSMEM1-203ENST00000455302 RAD21O60216 631 aa10.91□□□□□ -0.66
LSMEM1-203ENST00000455302 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
LSMEM1-203ENST00000455302 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.91□□□□□ -0.66
LSMEM1-203ENST00000455302 TROQ12816 1431 aaPredicted RBP10.91□□□□□ -0.66
LSMEM1-203ENST00000455302 PLA2R1Q13018 1463 aa10.9□□□□□ -0.66
LSMEM1-203ENST00000455302 BANK1Q8NDB2 785 aa10.9□□□□□ -0.66
LSMEM1-203ENST00000455302 EYA1Q99502 592 aa10.9□□□□□ -0.66
LSMEM1-203ENST00000455302 FMN1Q68DA7 1419 aa10.9□□□□□ -0.66
LSMEM1-203ENST00000455302 TRAK2O60296 914 aa10.89□□□□□ -0.67
LSMEM1-203ENST00000455302 DNAJB2P25686 324 aa10.89□□□□□ -0.67
LSMEM1-203ENST00000455302 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
LSMEM1-203ENST00000455302 EEA1Q15075 1411 aa10.89□□□□□ -0.67
LSMEM1-203ENST00000455302 TCOF1Q13428 1488 aaKnown RBP10.88□□□□□ -0.67
LSMEM1-203ENST00000455302 COL9A1P20849 921 aa10.88□□□□□ -0.67
LSMEM1-203ENST00000455302 TMEM259Q4ZIN3 620 aa10.88□□□□□ -0.67
LSMEM1-203ENST00000455302 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
LSMEM1-203ENST00000455302 FAM163AQ96GL9 167 aaPredicted RBP10.88□□□□□ -0.67
LSMEM1-203ENST00000455302 SPDYE5A6NIY4 337 aa10.87□□□□□ -0.67
LSMEM1-203ENST00000455302 NUDT18Q6ZVK8 323 aa10.87□□□□□ -0.67
LSMEM1-203ENST00000455302 CLUAP1Q96AJ1 413 aa10.87□□□□□ -0.67
LSMEM1-203ENST00000455302 ABCC1P33527 1531 aa10.87□□□□□ -0.67
LSMEM1-203ENST00000455302 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 CD46P15529 392 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 TUSC1Q2TAM9 212 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 RIC3Q7Z5B4 369 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 TATDN2Q93075 761 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 ARID3AQ99856 593 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 FAM198AQ9UFP1 575 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 TSKSQ9UJT2 592 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 PNMA3Q9UL41 463 aa10.86□□□□□ -0.67
LSMEM1-203ENST00000455302 SPIRE2Q8WWL2 714 aa10.85□□□□□ -0.67
LSMEM1-203ENST00000455302 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
LSMEM1-203ENST00000455302 ZNF777Q9ULD5 760 aaPredicted RBP10.85□□□□□ -0.67
LSMEM1-203ENST00000455302 CEP170BQ9Y4F5 1589 aaPredicted RBP10.85□□□□□ -0.67
LSMEM1-203ENST00000455302 SPAG9O60271 1321 aaKnown RBP10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 MYO3AQ8NEV4 1616 aa10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 DDX11L8A8MPP1 907 aa10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 GJA5P36382 358 aa10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 RFC5P40937 340 aa10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 PPP2R2DQ66LE6 453 aa10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 GGT6Q6P531 493 aa10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 MROH2AA6NES4 1674 aa10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 CPS1P31327 1500 aa10.84□□□□□ -0.67
LSMEM1-203ENST00000455302 ST18O60284 1047 aa10.83□□□□□ -0.68
LSMEM1-203ENST00000455302 HOXB1P14653 301 aaPredicted RBP10.83□□□□□ -0.68
LSMEM1-203ENST00000455302 PROSER2Q86WR7 435 aaPredicted RBP10.83□□□□□ -0.68
LSMEM1-203ENST00000455302 C1orf115Q9H7X2 142 aa10.83□□□□□ -0.68
LSMEM1-203ENST00000455302 ZNF142P52746 1687 aaPredicted RBP10.82□□□□□ -0.68
LSMEM1-203ENST00000455302 SPTLC1O15269 473 aa10.82□□□□□ -0.68
LSMEM1-203ENST00000455302 TMEM134Q9H6X4 195 aa10.82□□□□□ -0.68
LSMEM1-203ENST00000455302 KIDINS220Q9ULH0 1771 aa10.82□□□□□ -0.68
LSMEM1-203ENST00000455302 ITSN2Q9NZM3 1697 aa10.82□□□□□ -0.68
LSMEM1-203ENST00000455302 SHANK2Q9UPX8 1470 aa10.81□□□□□ -0.68
LSMEM1-203ENST00000455302 PREX2Q70Z35 1606 aa10.81□□□□□ -0.68
LSMEM1-203ENST00000455302 PRM3Q9NNZ6 103 aa10.81□□□□□ -0.68
LSMEM1-203ENST00000455302 SAMD9LQ8IVG5 1584 aa10.81□□□□□ -0.68
LSMEM1-203ENST00000455302 A2ML1A8K2U0 1454 aa10.81□□□□□ -0.68
LSMEM1-203ENST00000455302 ARHGAP35Q9NRY4 1499 aa10.81□□□□□ -0.68
LSMEM1-203ENST00000455302 HNRNPMP52272 730 aaKnown RBP eCLIP10.8□□□□□ -0.68
LSMEM1-203ENST00000455302 LIMD1Q9UGP4 676 aa10.8□□□□□ -0.68
LSMEM1-203ENST00000455302 CDC42BPBQ9Y5S2 1711 aa10.8□□□□□ -0.68
LSMEM1-203ENST00000455302 CLTCQ00610 1675 aaKnown RBP10.79□□□□□ -0.68
LSMEM1-203ENST00000455302 RSBN1LQ6PCB5 846 aaPredicted RBP10.79□□□□□ -0.68
LSMEM1-203ENST00000455302 WWC1Q8IX03 1113 aa10.79□□□□□ -0.68
LSMEM1-203ENST00000455302 A2MP01023 1474 aa10.79□□□□□ -0.68
LSMEM1-203ENST00000455302 RDH13Q8NBN7 331 aa10.78□□□□□ -0.68
LSMEM1-203ENST00000455302 SYCP2Q9BX26 1530 aa10.78□□□□□ -0.68
LSMEM1-203ENST00000455302 SUPT6HQ7KZ85 1726 aaKnown RBP10.78□□□□□ -0.68
LSMEM1-203ENST00000455302 USP46P62068 366 aa10.77□□□□□ -0.69
LSMEM1-203ENST00000455302 ANKLE2Q86XL3 938 aa10.77□□□□□ -0.69
LSMEM1-203ENST00000455302 KCNK17Q96T54 332 aa10.77□□□□□ -0.69
LSMEM1-203ENST00000455302 ATP7AQ04656 1500 aa10.77□□□□□ -0.69
LSMEM1-203ENST00000455302 CCDC18Q5T9S5 1454 aa10.76□□□□□ -0.69
LSMEM1-203ENST00000455302 SLC4A3P48751 1232 aa10.76□□□□□ -0.69
LSMEM1-203ENST00000455302 HDGFP51858 240 aaKnown RBP10.76□□□□□ -0.69
LSMEM1-203ENST00000455302 DNMT1P26358 1616 aaKnown RBP10.76□□□□□ -0.69
LSMEM1-203ENST00000455302 TNRQ92752 1358 aa10.76□□□□□ -0.69
LSMEM1-203ENST00000455302 PLXNC1O60486 1568 aa10.75□□□□□ -0.69
LSMEM1-203ENST00000455302 KDM4AO75164 1064 aa10.75□□□□□ -0.69
LSMEM1-203ENST00000455302 FNBP4Q8N3X1 1017 aaPredicted RBP10.75□□□□□ -0.69
LSMEM1-203ENST00000455302 SNRKQ9NRH2 765 aa10.75□□□□□ -0.69
LSMEM1-203ENST00000455302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
LSMEM1-203ENST00000455302 NEURL4Q96JN8 1562 aa10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 MOXD2PA6NHM9 499 aa10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 PRPF38BQ5VTL8 546 aaKnown RBP10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 FBXO31Q5XUX0 539 aaPredicted RBP10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 POM121Q96HA1 1249 aa10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 KIAA1468Q9P260 1216 aa10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 CFDP1Q9UEE9 299 aaPredicted RBP10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 RGS17Q9UGC6 210 aaPredicted RBP10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 SERPINA10Q9UK55 444 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms