RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 ZNF592Q92610 1267 aa11.96□□□□□ -0.49
LINC01940-201ENST00000455228 SH3BP1Q9Y3L3 701 aa11.96□□□□□ -0.49
LINC01940-201ENST00000455228 PREX2Q70Z35 1606 aa11.96□□□□□ -0.49
LINC01940-201ENST00000455228 MAFGO15525 162 aa11.96□□□□□ -0.5
LINC01940-201ENST00000455228 BSDC1Q9NW68 430 aaPredicted RBP11.96□□□□□ -0.5
LINC01940-201ENST00000455228 USP19O94966 1318 aa11.95□□□□□ -0.5
LINC01940-201ENST00000455228 NLRP1Q9C000 1473 aa11.95□□□□□ -0.5
LINC01940-201ENST00000455228 IQGAP3Q86VI3 1631 aa11.95□□□□□ -0.5
LINC01940-201ENST00000455228 HSP90AB3PQ58FF7 597 aa11.95□□□□□ -0.5
LINC01940-201ENST00000455228 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
LINC01940-201ENST00000455228 ATP10AO60312 1499 aa11.95□□□□□ -0.5
LINC01940-201ENST00000455228 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
LINC01940-201ENST00000455228 NPC1L1Q9UHC9 1359 aa11.95□□□□□ -0.5
LINC01940-201ENST00000455228 CLASP1Q7Z460 1538 aa11.95□□□□□ -0.5
LINC01940-201ENST00000455228 DUOX2Q9NRD8 1548 aa11.95□□□□□ -0.5
LINC01940-201ENST00000455228 SYNMO15061 1565 aa11.94□□□□□ -0.5
LINC01940-201ENST00000455228 BCL2L13Q9BXK5 485 aa11.94□□□□□ -0.5
LINC01940-201ENST00000455228 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
LINC01940-201ENST00000455228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC01940-201ENST00000455228 ZBTB22O15209 634 aa11.94□□□□□ -0.5
LINC01940-201ENST00000455228 CAPN2P17655 700 aa11.94□□□□□ -0.5
LINC01940-201ENST00000455228 BRPF1P55201 1214 aaPredicted RBP11.94□□□□□ -0.5
LINC01940-201ENST00000455228 EFCAB2Q5VUJ9 269 aa11.94□□□□□ -0.5
LINC01940-201ENST00000455228 TTC36A6NLP5 189 aa11.93□□□□□ -0.5
LINC01940-201ENST00000455228 GRPEL1Q9HAV7 217 aa11.93□□□□□ -0.5
LINC01940-201ENST00000455228 GABPB1Q06547 395 aaPredicted RBP11.93□□□□□ -0.5
LINC01940-201ENST00000455228 MORC1Q86VD1 984 aa11.93□□□□□ -0.5
LINC01940-201ENST00000455228 RWDD1Q9H446 243 aaPredicted RBP11.93□□□□□ -0.5
LINC01940-201ENST00000455228 FAM13BQ9NYF5 915 aa11.93□□□□□ -0.5
LINC01940-201ENST00000455228 PPP6R1Q9UPN7 881 aa11.93□□□□□ -0.5
LINC01940-201ENST00000455228 ABCC2Q92887 1545 aa11.93□□□□□ -0.5
LINC01940-201ENST00000455228 MAST1Q9Y2H9 1570 aa11.93□□□□□ -0.5
LINC01940-201ENST00000455228 APPP05067 770 aa11.92□□□□□ -0.5
LINC01940-201ENST00000455228 SIRT1Q96EB6 747 aa11.92□□□□□ -0.5
LINC01940-201ENST00000455228 MCM5P33992 734 aa11.92□□□□□ -0.5
LINC01940-201ENST00000455228 SATB1Q01826 763 aa11.92□□□□□ -0.5
LINC01940-201ENST00000455228 CFAP70Q5T0N1 1121 aa11.91□□□□□ -0.5
LINC01940-201ENST00000455228 PDZRN3Q9UPQ7 1066 aa11.91□□□□□ -0.5
LINC01940-201ENST00000455228 RNF17Q9BXT8 1623 aaKnown RBP11.91□□□□□ -0.5
LINC01940-201ENST00000455228 RARSP54136 660 aaKnown RBP11.91□□□□□ -0.5
LINC01940-201ENST00000455228 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
LINC01940-201ENST00000455228 GZF1Q9H116 711 aaPredicted RBP11.91□□□□□ -0.5
LINC01940-201ENST00000455228 UQCRHLA0A096LP55 91 aa11.91□□□□□ -0.5
LINC01940-201ENST00000455228 UQCRHP07919 91 aa11.91□□□□□ -0.5
LINC01940-201ENST00000455228 CCDC173Q0VFZ6 552 aa11.91□□□□□ -0.5
LINC01940-201ENST00000455228 NBPF9Q3BBW0 867 aa11.91□□□□□ -0.5
LINC01940-201ENST00000455228 CARD14Q9BXL6 1004 aa11.91□□□□□ -0.5
LINC01940-201ENST00000455228 SPAG9O60271 1321 aaKnown RBP11.91□□□□□ -0.5
LINC01940-201ENST00000455228 PATL2C9JE40 543 aaKnown RBP11.9□□□□□ -0.5
LINC01940-201ENST00000455228 IRF6O14896 467 aa11.9□□□□□ -0.5
LINC01940-201ENST00000455228 SASS6Q6UVJ0 657 aa11.9□□□□□ -0.5
LINC01940-201ENST00000455228 TCP11L2Q8N4U5 519 aa11.9□□□□□ -0.5
LINC01940-201ENST00000455228 TBC1D32Q96NH3 1257 aa11.9□□□□□ -0.5
LINC01940-201ENST00000455228 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
LINC01940-201ENST00000455228 PCDHB15Q9Y5E8 787 aa11.9□□□□□ -0.5
LINC01940-201ENST00000455228 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
LINC01940-201ENST00000455228 TTC37Q6PGP7 1564 aa11.9□□□□□ -0.5
LINC01940-201ENST00000455228 PLXNC1O60486 1568 aa11.9□□□□□ -0.51
LINC01940-201ENST00000455228 MADDQ8WXG6 1647 aa11.89□□□□□ -0.51
LINC01940-201ENST00000455228 MFAP1P55081 439 aaKnown RBP11.89□□□□□ -0.51
LINC01940-201ENST00000455228 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
LINC01940-201ENST00000455228 CREBRFQ8IUR6 639 aa11.89□□□□□ -0.51
LINC01940-201ENST00000455228 KIF16BQ96L93 1317 aa11.89□□□□□ -0.51
LINC01940-201ENST00000455228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC01940-201ENST00000455228 NOL7Q9UMY1 257 aaKnown RBP11.88□□□□□ -0.51
LINC01940-201ENST00000455228 IQGAP1P46940 1657 aa11.88□□□□□ -0.51
LINC01940-201ENST00000455228 KANK1Q14678 1352 aa11.88□□□□□ -0.51
LINC01940-201ENST00000455228 RLBP1P12271 317 aa11.88□□□□□ -0.51
LINC01940-201ENST00000455228 NOP2P46087 812 aaKnown RBP11.88□□□□□ -0.51
LINC01940-201ENST00000455228 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
LINC01940-201ENST00000455228 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
LINC01940-201ENST00000455228 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
LINC01940-201ENST00000455228 TNNQ9UQP3 1299 aa11.88□□□□□ -0.51
LINC01940-201ENST00000455228 CEP83Q9Y592 693 aa11.88□□□□□ -0.51
LINC01940-201ENST00000455228 AFAP1Q8N556 730 aa11.87□□□□□ -0.51
LINC01940-201ENST00000455228 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC01940-201ENST00000455228 CGNQ9P2M7 1197 aaKnown RBP11.87□□□□□ -0.51
LINC01940-201ENST00000455228 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
LINC01940-201ENST00000455228 PSMD1Q99460 953 aa11.87□□□□□ -0.51
LINC01940-201ENST00000455228 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.87□□□□□ -0.51
LINC01940-201ENST00000455228 KDM5AP29375 1690 aaKnown RBP11.87□□□□□ -0.51
LINC01940-201ENST00000455228 NCAPGQ9BPX3 1015 aa11.87□□□□□ -0.51
LINC01940-201ENST00000455228 POLR3AO14802 1390 aaPredicted RBP11.86□□□□□ -0.51
LINC01940-201ENST00000455228 MYRIPQ8NFW9 859 aa11.86□□□□□ -0.51
LINC01940-201ENST00000455228 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
LINC01940-201ENST00000455228 WDR63Q8IWG1 891 aa11.86□□□□□ -0.51
LINC01940-201ENST00000455228 BRMS1Q9HCU9 246 aa11.86□□□□□ -0.51
LINC01940-201ENST00000455228 KIF3AQ9Y496 699 aa11.86□□□□□ -0.51
LINC01940-201ENST00000455228 CCDC66A2RUB6 948 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 KIF3BO15066 747 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 MCM4P33991 863 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 ATP2B3Q16720 1220 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 TIGD1Q96MW7 591 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 FEZ1Q99689 392 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 C22orf23Q9BZE7 217 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 RBM25P49756 843 aaKnown RBP11.85□□□□□ -0.51
LINC01940-201ENST00000455228 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 ZKSCAN2Q63HK3 967 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 MKL1Q969V6 931 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 PRDM16Q9HAZ2 1276 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms