RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 C8orf37Q96NL8 207 aa16.05■□□□□ 0.16
HDAC9-217ENST00000455069 ARHGEF10O15013 1369 aa16.04■□□□□ 0.16
HDAC9-217ENST00000455069 USP47Q96K76 1375 aa16.04■□□□□ 0.16
HDAC9-217ENST00000455069 TESK2Q96S53 571 aa16.04■□□□□ 0.16
HDAC9-217ENST00000455069 MON2Q7Z3U7 1717 aa16.04■□□□□ 0.16
HDAC9-217ENST00000455069 PLCH1Q4KWH8 1693 aa16.03■□□□□ 0.16
HDAC9-217ENST00000455069 UPF1Q92900 1129 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDAC9-217ENST00000455069 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.02■□□□□ 0.16
HDAC9-217ENST00000455069 ST20-MTHFSA0A0A6YYL1 179 aa16.02■□□□□ 0.16
HDAC9-217ENST00000455069 CABLES1Q8TDN4 633 aa16.02■□□□□ 0.16
HDAC9-217ENST00000455069 PIK3C2AO00443 1686 aa16.02■□□□□ 0.15
HDAC9-217ENST00000455069 LMOD2Q6P5Q4 547 aa16.01■□□□□ 0.15
HDAC9-217ENST00000455069 QTRT2Q9H974 415 aaKnown RBP16.01■□□□□ 0.15
HDAC9-217ENST00000455069 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
HDAC9-217ENST00000455069 USP6P35125 1406 aa16.01■□□□□ 0.15
HDAC9-217ENST00000455069 SSH2Q76I76 1423 aa16.01■□□□□ 0.15
HDAC9-217ENST00000455069 ATAD2Q6PL18 1390 aa16■□□□□ 0.15
HDAC9-217ENST00000455069 CD163L1Q9NR16 1453 aa16■□□□□ 0.15
HDAC9-217ENST00000455069 RBM6P78332 1123 aaKnown RBP16■□□□□ 0.15
HDAC9-217ENST00000455069 NGLY1Q96IV0 654 aa16■□□□□ 0.15
HDAC9-217ENST00000455069 RGS12O14924 1447 aa16■□□□□ 0.15
HDAC9-217ENST00000455069 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
HDAC9-217ENST00000455069 NRAPQ86VF7 1730 aa15.99■□□□□ 0.15
HDAC9-217ENST00000455069 NWD2Q9ULI1 1742 aa15.99■□□□□ 0.15
HDAC9-217ENST00000455069 SLIT2O94813 1529 aa15.99■□□□□ 0.15
HDAC9-217ENST00000455069 BCL9LQ86UU0 1499 aa15.98■□□□□ 0.15
HDAC9-217ENST00000455069 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
HDAC9-217ENST00000455069 CPSF1Q10570 1443 aaKnown RBP15.98■□□□□ 0.15
HDAC9-217ENST00000455069 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
HDAC9-217ENST00000455069 FNBP4Q8N3X1 1017 aaPredicted RBP15.97■□□□□ 0.15
HDAC9-217ENST00000455069 MYOM1P52179 1685 aa15.96■□□□□ 0.15
HDAC9-217ENST00000455069 COL14A1Q05707 1796 aaKnown RBP15.96■□□□□ 0.15
HDAC9-217ENST00000455069 ATRNO75882 1429 aa15.95■□□□□ 0.14
HDAC9-217ENST00000455069 NUTM2GQ5VZR2 741 aa15.95■□□□□ 0.14
HDAC9-217ENST00000455069 USP21Q9UK80 565 aa15.95■□□□□ 0.14
HDAC9-217ENST00000455069 BRD4O60885 1362 aaPredicted RBP15.94■□□□□ 0.14
HDAC9-217ENST00000455069 USP54Q70EL1 1684 aa15.94■□□□□ 0.14
HDAC9-217ENST00000455069 SLIT3O75094 1523 aa15.94■□□□□ 0.14
HDAC9-217ENST00000455069 USP19O94966 1318 aa15.94■□□□□ 0.14
HDAC9-217ENST00000455069 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
HDAC9-217ENST00000455069 TRPC5Q9UL62 973 aaPredicted RBP15.93■□□□□ 0.14
HDAC9-217ENST00000455069 GLI3P10071 1580 aa15.92■□□□□ 0.14
HDAC9-217ENST00000455069 PUS7Q96PZ0 661 aaKnown RBP15.92■□□□□ 0.14
HDAC9-217ENST00000455069 LMO7Q8WWI1 1683 aa15.92■□□□□ 0.14
HDAC9-217ENST00000455069 A0A1W2PP64 1363 aa15.91■□□□□ 0.14
HDAC9-217ENST00000455069 KTN1Q86UP2 1357 aaKnown RBP15.91■□□□□ 0.14
HDAC9-217ENST00000455069 ABTB2Q8N961 1025 aa15.91■□□□□ 0.14
HDAC9-217ENST00000455069 SLC12A5Q9H2X9 1139 aa15.91■□□□□ 0.14
HDAC9-217ENST00000455069 FAM83GA6ND36 823 aa15.9■□□□□ 0.14
HDAC9-217ENST00000455069 TTC21BQ7Z4L5 1316 aa15.9■□□□□ 0.14
HDAC9-217ENST00000455069 TMC1Q8TDI8 760 aa15.89■□□□□ 0.13
HDAC9-217ENST00000455069 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.13
HDAC9-217ENST00000455069 KIAA0232Q92628 1395 aa15.88■□□□□ 0.13
HDAC9-217ENST00000455069 NINLQ9Y2I6 1382 aa15.88■□□□□ 0.13
HDAC9-217ENST00000455069 TMF1P82094 1093 aa15.88■□□□□ 0.13
HDAC9-217ENST00000455069 UNC5CLQ8IV45 518 aa15.88■□□□□ 0.13
HDAC9-217ENST00000455069 COL18A1P39060 1754 aa15.87■□□□□ 0.13
HDAC9-217ENST00000455069 EDC4Q6P2E9 1401 aaKnown RBP15.87■□□□□ 0.13
HDAC9-217ENST00000455069 NFAT5O94916 1531 aa15.87■□□□□ 0.13
HDAC9-217ENST00000455069 TTC21AQ8NDW8 1320 aa15.87■□□□□ 0.13
HDAC9-217ENST00000455069 EP400Q96L91 3159 aa15.86■□□□□ 0.13
HDAC9-217ENST00000455069 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
HDAC9-217ENST00000455069 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
HDAC9-217ENST00000455069 NLRP13Q86W25 1043 aa15.86■□□□□ 0.13
HDAC9-217ENST00000455069 BRWD3Q6RI45 1802 aa15.86■□□□□ 0.13
HDAC9-217ENST00000455069 CPDO75976 1380 aa15.86■□□□□ 0.13
HDAC9-217ENST00000455069 RGPD5Q99666 1765 aa15.85■□□□□ 0.13
HDAC9-217ENST00000455069 ZC3H6P61129 1189 aaKnown RBP15.85■□□□□ 0.13
HDAC9-217ENST00000455069 CAMTA1Q9Y6Y1 1673 aa15.85■□□□□ 0.13
HDAC9-217ENST00000455069 ANKRD36BQ8N2N9 1353 aa15.85■□□□□ 0.13
HDAC9-217ENST00000455069 GCP02774 474 aa15.84■□□□□ 0.13
HDAC9-217ENST00000455069 NLRP6P59044 892 aa15.84■□□□□ 0.13
HDAC9-217ENST00000455069 CHRNA2Q15822 529 aa15.84■□□□□ 0.13
HDAC9-217ENST00000455069 HDGFL2Q7Z4V5 671 aaPredicted RBP15.84■□□□□ 0.13
HDAC9-217ENST00000455069 GJD4Q96KN9 370 aaPredicted RBP15.84■□□□□ 0.13
HDAC9-217ENST00000455069 PRDM11Q9NQV5 511 aa15.84■□□□□ 0.13
HDAC9-217ENST00000455069 BTG4Q9NY30 223 aa15.84■□□□□ 0.13
HDAC9-217ENST00000455069 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
HDAC9-217ENST00000455069 LTN1O94822 1766 aa15.84■□□□□ 0.13
HDAC9-217ENST00000455069 KIF20BQ96Q89 1820 aa15.84■□□□□ 0.13
HDAC9-217ENST00000455069 EIF4G2P78344 907 aaKnown RBP eCLIP15.83■□□□□ 0.12
HDAC9-217ENST00000455069 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.83■□□□□ 0.12
HDAC9-217ENST00000455069 USP31Q70CQ4 1352 aa15.83■□□□□ 0.12
HDAC9-217ENST00000455069 OVOS2A0A0J9YW53 1432 aa15.83■□□□□ 0.12
HDAC9-217ENST00000455069 OVOS2Q6IE36 1432 aa15.83■□□□□ 0.12
HDAC9-217ENST00000455069 VPS72Q15906 364 aa15.82■□□□□ 0.12
HDAC9-217ENST00000455069 NME9Q86XW9 330 aa15.82■□□□□ 0.12
HDAC9-217ENST00000455069 TERF2IPQ9NYB0 399 aa15.82■□□□□ 0.12
HDAC9-217ENST00000455069 THSD7AQ9UPZ6 1657 aa15.8■□□□□ 0.12
HDAC9-217ENST00000455069 COL5A2P05997 1499 aaPredicted RBP15.79■□□□□ 0.12
HDAC9-217ENST00000455069 CDCA8Q53HL2 280 aa15.79■□□□□ 0.12
HDAC9-217ENST00000455069 WNK3Q9BYP7 1800 aa15.78■□□□□ 0.12
HDAC9-217ENST00000455069 SRCAPQ6ZRS2 3230 aa15.77■□□□□ 0.12
HDAC9-217ENST00000455069 C11orf95C9JLR9 678 aaPredicted RBP15.77■□□□□ 0.12
HDAC9-217ENST00000455069 ABCC6O95255 1503 aa15.77■□□□□ 0.11
HDAC9-217ENST00000455069 AATKQ6ZMQ8 1374 aa15.76■□□□□ 0.11
HDAC9-217ENST00000455069 SPATA31A5Q5VU36 1347 aa15.76■□□□□ 0.11
HDAC9-217ENST00000455069 SPATA31A7Q8IWB4 1347 aa15.76■□□□□ 0.11
HDAC9-217ENST00000455069 SOX12O15370 315 aa15.76■□□□□ 0.11
HDAC9-217ENST00000455069 ARHGEF25Q86VW2 580 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms