RNA–Protein interactions for RNA: ENST00000454906.6

EXTL3-202, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-202ENST00000454906 ACEP12821 1306 aa12.5□□□□□ -0.41
EXTL3-202ENST00000454906 EVC2Q86UK5 1308 aa12.5□□□□□ -0.41
EXTL3-202ENST00000454906 LTN1O94822 1766 aa12.49□□□□□ -0.41
EXTL3-202ENST00000454906 MYOM1P52179 1685 aa12.49□□□□□ -0.41
EXTL3-202ENST00000454906 USP47Q96K76 1375 aa12.49□□□□□ -0.41
EXTL3-202ENST00000454906 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
EXTL3-202ENST00000454906 KIF20BQ96Q89 1820 aa12.48□□□□□ -0.41
EXTL3-202ENST00000454906 NWD2Q9ULI1 1742 aa12.48□□□□□ -0.41
EXTL3-202ENST00000454906 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
EXTL3-202ENST00000454906 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
EXTL3-202ENST00000454906 ST20-MTHFSA0A0A6YYL1 179 aa12.47□□□□□ -0.41
EXTL3-202ENST00000454906 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
EXTL3-202ENST00000454906 CABP1Q9NZU7 370 aa12.47□□□□□ -0.41
EXTL3-202ENST00000454906 ARHGEF10O15013 1369 aa12.46□□□□□ -0.41
EXTL3-202ENST00000454906 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
EXTL3-202ENST00000454906 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
EXTL3-202ENST00000454906 SOX12O15370 315 aa12.45□□□□□ -0.42
EXTL3-202ENST00000454906 USP21Q9UK80 565 aa12.45□□□□□ -0.42
EXTL3-202ENST00000454906 POLR3AO14802 1390 aaPredicted RBP12.44□□□□□ -0.42
EXTL3-202ENST00000454906 USP6P35125 1406 aa12.44□□□□□ -0.42
EXTL3-202ENST00000454906 ZNF772Q68DY9 489 aaPredicted RBP12.43□□□□□ -0.42
EXTL3-202ENST00000454906 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
EXTL3-202ENST00000454906 GLI3P10071 1580 aa12.43□□□□□ -0.42
EXTL3-202ENST00000454906 ATAD2Q6PL18 1390 aa12.43□□□□□ -0.42
EXTL3-202ENST00000454906 ZC3H6P61129 1189 aaKnown RBP12.42□□□□□ -0.42
EXTL3-202ENST00000454906 CHRNA2Q15822 529 aa12.42□□□□□ -0.42
EXTL3-202ENST00000454906 ABTB2Q8N961 1025 aa12.42□□□□□ -0.42
EXTL3-202ENST00000454906 KTN1Q86UP2 1357 aaKnown RBP12.42□□□□□ -0.42
EXTL3-202ENST00000454906 RGS12O14924 1447 aa12.41□□□□□ -0.42
EXTL3-202ENST00000454906 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.41□□□□□ -0.42
EXTL3-202ENST00000454906 QTRT2Q9H974 415 aaKnown RBP12.41□□□□□ -0.42
EXTL3-202ENST00000454906 WNK3Q9BYP7 1800 aa12.41□□□□□ -0.42
EXTL3-202ENST00000454906 RGPD2P0DJD1 1756 aa12.41□□□□□ -0.42
EXTL3-202ENST00000454906 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
EXTL3-202ENST00000454906 SBNO2Q9Y2G9 1366 aa12.4□□□□□ -0.42
EXTL3-202ENST00000454906 BCL9LQ86UU0 1499 aa12.4□□□□□ -0.43
EXTL3-202ENST00000454906 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.43
EXTL3-202ENST00000454906 SLIT2O94813 1529 aa12.39□□□□□ -0.43
EXTL3-202ENST00000454906 RXRBP28702 533 aa12.39□□□□□ -0.43
EXTL3-202ENST00000454906 TESK2Q96S53 571 aa12.39□□□□□ -0.43
EXTL3-202ENST00000454906 SLC12A5Q9H2X9 1139 aa12.39□□□□□ -0.43
EXTL3-202ENST00000454906 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
EXTL3-202ENST00000454906 KIAA0232Q92628 1395 aa12.39□□□□□ -0.43
EXTL3-202ENST00000454906 LMO7Q8WWI1 1683 aa12.38□□□□□ -0.43
EXTL3-202ENST00000454906 ATRNO75882 1429 aa12.38□□□□□ -0.43
EXTL3-202ENST00000454906 KAT6BQ8WYB5 2073 aa12.38□□□□□ -0.43
EXTL3-202ENST00000454906 A0A0G2JS52 829 aa12.38□□□□□ -0.43
EXTL3-202ENST00000454906 SOCS7O14512 581 aa12.38□□□□□ -0.43
EXTL3-202ENST00000454906 MYT1Q01538 1121 aa12.38□□□□□ -0.43
EXTL3-202ENST00000454906 PRDM11Q9NQV5 511 aa12.38□□□□□ -0.43
EXTL3-202ENST00000454906 A0A1W2PP64 1363 aa12.38□□□□□ -0.43
EXTL3-202ENST00000454906 USP54Q70EL1 1684 aa12.38□□□□□ -0.43
EXTL3-202ENST00000454906 FAM83GA6ND36 823 aa12.37□□□□□ -0.43
EXTL3-202ENST00000454906 NLRP6P59044 892 aa12.37□□□□□ -0.43
EXTL3-202ENST00000454906 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
EXTL3-202ENST00000454906 BTG4Q9NY30 223 aa12.37□□□□□ -0.43
EXTL3-202ENST00000454906 COL18A1P39060 1754 aa12.37□□□□□ -0.43
EXTL3-202ENST00000454906 SLIT3O75094 1523 aa12.37□□□□□ -0.43
EXTL3-202ENST00000454906 HSPA5P11021 654 aaKnown RBP12.36□□□□□ -0.43
EXTL3-202ENST00000454906 ZEB1P37275 1124 aaPredicted RBP12.36□□□□□ -0.43
EXTL3-202ENST00000454906 TMF1P82094 1093 aa12.36□□□□□ -0.43
EXTL3-202ENST00000454906 NME9Q86XW9 330 aa12.36□□□□□ -0.43
EXTL3-202ENST00000454906 TRPC5Q9UL62 973 aaPredicted RBP12.36□□□□□ -0.43
EXTL3-202ENST00000454906 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
EXTL3-202ENST00000454906 MAP2P11137 1827 aaKnown RBP12.35□□□□□ -0.43
EXTL3-202ENST00000454906 ANKRD26Q9UPS8 1709 aa12.35□□□□□ -0.43
EXTL3-202ENST00000454906 HDGFL2Q7Z4V5 671 aaPredicted RBP12.35□□□□□ -0.43
EXTL3-202ENST00000454906 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
EXTL3-202ENST00000454906 CPSF1Q10570 1443 aaKnown RBP12.35□□□□□ -0.43
EXTL3-202ENST00000454906 RBM6P78332 1123 aaKnown RBP12.34□□□□□ -0.43
EXTL3-202ENST00000454906 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
EXTL3-202ENST00000454906 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
EXTL3-202ENST00000454906 USP35Q9P2H5 1018 aa12.34□□□□□ -0.43
EXTL3-202ENST00000454906 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
EXTL3-202ENST00000454906 CAMTA1Q9Y6Y1 1673 aa12.34□□□□□ -0.43
EXTL3-202ENST00000454906 NFAT5O94916 1531 aa12.33□□□□□ -0.44
EXTL3-202ENST00000454906 SSH2Q76I76 1423 aa12.33□□□□□ -0.44
EXTL3-202ENST00000454906 USP19O94966 1318 aa12.33□□□□□ -0.44
EXTL3-202ENST00000454906 EDC4Q6P2E9 1401 aaKnown RBP12.32□□□□□ -0.44
EXTL3-202ENST00000454906 EIF4G2P78344 907 aaKnown RBP eCLIP12.32□□□□□ -0.44
EXTL3-202ENST00000454906 GJD4Q96KN9 370 aaPredicted RBP12.31□□□□□ -0.44
EXTL3-202ENST00000454906 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
EXTL3-202ENST00000454906 EP400Q96L91 3159 aa12.3□□□□□ -0.44
EXTL3-202ENST00000454906 THSD7AQ9UPZ6 1657 aa12.3□□□□□ -0.44
EXTL3-202ENST00000454906 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
EXTL3-202ENST00000454906 GCP02774 474 aa12.3□□□□□ -0.44
EXTL3-202ENST00000454906 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
EXTL3-202ENST00000454906 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
EXTL3-202ENST00000454906 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
EXTL3-202ENST00000454906 NSD3Q9BZ95 1437 aa12.29□□□□□ -0.44
EXTL3-202ENST00000454906 COL5A2P05997 1499 aaPredicted RBP12.29□□□□□ -0.44
EXTL3-202ENST00000454906 EVA1CP58658 441 aa12.29□□□□□ -0.44
EXTL3-202ENST00000454906 ANKRD36BQ8N2N9 1353 aa12.29□□□□□ -0.44
EXTL3-202ENST00000454906 PEAK1Q9H792 1746 aa12.28□□□□□ -0.44
EXTL3-202ENST00000454906 FBLN1P23142 703 aa12.28□□□□□ -0.44
EXTL3-202ENST00000454906 FAM182BQ5T319 152 aa12.28□□□□□ -0.44
EXTL3-202ENST00000454906 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
EXTL3-202ENST00000454906 BRD4O60885 1362 aaPredicted RBP12.28□□□□□ -0.44
EXTL3-202ENST00000454906 FAM208AQ9UK61 1670 aaKnown RBP12.27□□□□□ -0.45
EXTL3-202ENST00000454906 CNGB1Q14028 1251 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms