RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 LYPD8Q6UX82 237 aa9.24□□□□□ -0.93
CDH19-202ENST00000454642 TBC1D9Q6ZT07 1266 aa9.24□□□□□ -0.93
CDH19-202ENST00000454642 WNT2BQ93097 391 aa9.24□□□□□ -0.93
CDH19-202ENST00000454642 EIF4G2P78344 907 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDH19-202ENST00000454642 MAFBQ9Y5Q3 323 aaPredicted RBP9.23□□□□□ -0.93
CDH19-202ENST00000454642 IFFO2Q5TF58 517 aa9.23□□□□□ -0.93
CDH19-202ENST00000454642 USB1Q9BQ65 265 aaKnown RBP9.23□□□□□ -0.93
CDH19-202ENST00000454642 GOLGA8CPA6NN73 597 aa9.22□□□□□ -0.93
CDH19-202ENST00000454642 FBXO45P0C2W1 286 aa9.22□□□□□ -0.93
CDH19-202ENST00000454642 MAP10Q9P2G4 905 aa9.22□□□□□ -0.93
CDH19-202ENST00000454642 USTQ9Y2C2 406 aa9.22□□□□□ -0.93
CDH19-202ENST00000454642 APLP1P51693 650 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 PPP4CP60510 307 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 NR1H3Q13133 447 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 SCUBE3Q8IX30 993 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 PIK3CDO00329 1044 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 BRD1O95696 1058 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 BCAMP50895 628 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 PRR14Q9BWN1 585 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 FKBPLQ9UIM3 349 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 HPS5Q9UPZ3 1129 aa9.2□□□□□ -0.94
CDH19-202ENST00000454642 ZBBXA8MT70 800 aa9.19□□□□□ -0.94
CDH19-202ENST00000454642 ATP9BO43861 1147 aa9.19□□□□□ -0.94
CDH19-202ENST00000454642 CTHP32929 405 aa9.19□□□□□ -0.94
CDH19-202ENST00000454642 MFAP1P55081 439 aaKnown RBP9.18□□□□□ -0.94
CDH19-202ENST00000454642 ANKK1Q8NFD2 765 aa9.18□□□□□ -0.94
CDH19-202ENST00000454642 PCDHB3Q9Y5E6 796 aa9.18□□□□□ -0.94
CDH19-202ENST00000454642 MTMR7Q9Y216 660 aa9.17□□□□□ -0.94
CDH19-202ENST00000454642 ATG7O95352 703 aa9.16□□□□□ -0.94
CDH19-202ENST00000454642 FMNL1O95466 1100 aaPredicted RBP9.16□□□□□ -0.94
CDH19-202ENST00000454642 F12P00748 615 aaPredicted RBP9.16□□□□□ -0.94
CDH19-202ENST00000454642 SOWAHBA6NEL2 793 aa9.16□□□□□ -0.94
CDH19-202ENST00000454642 KCNA1Q09470 495 aa9.16□□□□□ -0.94
CDH19-202ENST00000454642 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
CDH19-202ENST00000454642 TMEM88BA6NKF7 163 aa9.15□□□□□ -0.94
CDH19-202ENST00000454642 JUNDP17535 347 aa9.15□□□□□ -0.94
CDH19-202ENST00000454642 THAP11Q96EK4 314 aa9.15□□□□□ -0.94
CDH19-202ENST00000454642 SALL2Q9Y467 1007 aaPredicted RBP9.15□□□□□ -0.94
CDH19-202ENST00000454642 NR1I2O75469 434 aa9.14□□□□□ -0.95
CDH19-202ENST00000454642 PTPRNQ16849 979 aa9.14□□□□□ -0.95
CDH19-202ENST00000454642 DEPDC4Q8N2C3 294 aa9.14□□□□□ -0.95
CDH19-202ENST00000454642 RGS22Q8NE09 1264 aa9.14□□□□□ -0.95
CDH19-202ENST00000454642 PATL2C9JE40 543 aaKnown RBP9.13□□□□□ -0.95
CDH19-202ENST00000454642 SKIP12755 728 aa9.13□□□□□ -0.95
CDH19-202ENST00000454642 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
CDH19-202ENST00000454642 RGS20O76081 388 aa9.13□□□□□ -0.95
CDH19-202ENST00000454642 KANK4Q5T7N3 995 aaPredicted RBP9.13□□□□□ -0.95
CDH19-202ENST00000454642 FOXD4L5Q5VV16 416 aaPredicted RBP9.13□□□□□ -0.95
CDH19-202ENST00000454642 FOXD4L4Q8WXT5 416 aaPredicted RBP9.13□□□□□ -0.95
CDH19-202ENST00000454642 IVNS1ABPQ9Y6Y0 642 aa9.13□□□□□ -0.95
CDH19-202ENST00000454642 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
CDH19-202ENST00000454642 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
CDH19-202ENST00000454642 USP17L2Q6R6M4 530 aa9.12□□□□□ -0.95
CDH19-202ENST00000454642 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
CDH19-202ENST00000454642 A0A0G2JS52 829 aa9.11□□□□□ -0.95
CDH19-202ENST00000454642 COPS2P61201 443 aa9.11□□□□□ -0.95
CDH19-202ENST00000454642 FAM174AQ8TBP5 190 aa9.11□□□□□ -0.95
CDH19-202ENST00000454642 PRDM9Q9NQV7 894 aa9.11□□□□□ -0.95
CDH19-202ENST00000454642 USP17L5A8MUK1 530 aa9.1□□□□□ -0.95
CDH19-202ENST00000454642 ITGBL1O95965 494 aaPredicted RBP9.1□□□□□ -0.95
CDH19-202ENST00000454642 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
CDH19-202ENST00000454642 NUDT12Q9BQG2 462 aa9.1□□□□□ -0.95
CDH19-202ENST00000454642 WBP1LQ9NX94 342 aa9.1□□□□□ -0.95
CDH19-202ENST00000454642 CCNYL3P0C7X3 344 aa9.1□□□□□ -0.95
CDH19-202ENST00000454642 TMEM164Q5U3C3 297 aa9.1□□□□□ -0.95
CDH19-202ENST00000454642 NYAP1Q6ZVC0 841 aa9.1□□□□□ -0.95
CDH19-202ENST00000454642 SPSB2Q99619 263 aa9.1□□□□□ -0.95
CDH19-202ENST00000454642 ZMIZ1Q9ULJ6 1067 aa9.1□□□□□ -0.95
CDH19-202ENST00000454642 FAM160A2Q8N612 972 aaPredicted RBP9.09□□□□□ -0.95
CDH19-202ENST00000454642 PCDHB9Q9Y5E1 797 aa9.09□□□□□ -0.95
CDH19-202ENST00000454642 ZC3H4Q9UPT8 1303 aaKnown RBP9.08□□□□□ -0.96
CDH19-202ENST00000454642 SLFNL1Q499Z3 407 aa9.08□□□□□ -0.96
CDH19-202ENST00000454642 EVA1BQ9NVM1 165 aa9.08□□□□□ -0.96
CDH19-202ENST00000454642 NOVA2Q9UNW9 492 aaKnown RBP9.08□□□□□ -0.96
CDH19-202ENST00000454642 PTK2Q05397 1052 aa9.07□□□□□ -0.96
CDH19-202ENST00000454642 NFATC2IPQ8NCF5 419 aa9.07□□□□□ -0.96
CDH19-202ENST00000454642 ZNF428Q96B54 188 aa9.07□□□□□ -0.96
CDH19-202ENST00000454642 OCSTAMPQ9BR26 566 aa9.07□□□□□ -0.96
CDH19-202ENST00000454642 CEP126Q9P2H0 1117 aa9.07□□□□□ -0.96
CDH19-202ENST00000454642 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
CDH19-202ENST00000454642 KCNH2Q12809 1159 aa9.07□□□□□ -0.96
CDH19-202ENST00000454642 NCOA4Q13772 614 aa9.07□□□□□ -0.96
CDH19-202ENST00000454642 DXOO77932 396 aaKnown RBP9.06□□□□□ -0.96
CDH19-202ENST00000454642 MSS51Q4VC12 460 aa9.06□□□□□ -0.96
CDH19-202ENST00000454642 CRTC2Q53ET0 693 aaPredicted RBP9.06□□□□□ -0.96
CDH19-202ENST00000454642 TLL1O43897 1013 aa9.05□□□□□ -0.96
CDH19-202ENST00000454642 PDXDC2PQ6P474 469 aa9.05□□□□□ -0.96
CDH19-202ENST00000454642 RNF135Q8IUD6 432 aa9.05□□□□□ -0.96
CDH19-202ENST00000454642 CCDC24Q8N4L8 307 aa9.05□□□□□ -0.96
CDH19-202ENST00000454642 RASA1P20936 1047 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 RBM25P49756 843 aaKnown RBP9.04□□□□□ -0.96
CDH19-202ENST00000454642 ELOAQ14241 798 aaKnown RBP9.04□□□□□ -0.96
CDH19-202ENST00000454642 PLEKHM2Q8IWE5 1019 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L15C9J2P7 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L10C9JJH3 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L13C9JLJ4 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L12C9JPN9 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L11C9JVI0 530 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms