RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 CCDC61Q9Y6R9 512 aa26.4■■□□□ 1.82
SEC22C-212ENST00000454141 POLR3AO14802 1390 aaPredicted RBP26.4■■□□□ 1.82
SEC22C-212ENST00000454141 CENPJQ9HC77 1338 aaPredicted RBP26.39■■□□□ 1.82
SEC22C-212ENST00000454141 COL14A1Q05707 1796 aaKnown RBP26.38■■□□□ 1.81
SEC22C-212ENST00000454141 SIN3AQ96ST3 1273 aa26.38■■□□□ 1.81
SEC22C-212ENST00000454141 NRAPQ86VF7 1730 aa26.38■■□□□ 1.81
SEC22C-212ENST00000454141 ACEP12821 1306 aa26.38■■□□□ 1.81
SEC22C-212ENST00000454141 BTG4Q9NY30 223 aa26.37■■□□□ 1.81
SEC22C-212ENST00000454141 PLEKHG3A1L390 1219 aa26.36■■□□□ 1.81
SEC22C-212ENST00000454141 SEPT12Q8IYM1 358 aa26.36■■□□□ 1.81
SEC22C-212ENST00000454141 CCDC125Q86Z20 511 aa26.35■■□□□ 1.81
SEC22C-212ENST00000454141 ONECUT3O60422 494 aaPredicted RBP26.34■■□□□ 1.81
SEC22C-212ENST00000454141 SRPK2P78362 688 aaKnown RBP26.34■■□□□ 1.81
SEC22C-212ENST00000454141 NBPF8Q3BBV2 869 aa26.34■■□□□ 1.81
SEC22C-212ENST00000454141 PRDM11Q9NQV5 511 aa26.33■■□□□ 1.81
SEC22C-212ENST00000454141 QRICH2Q9H0J4 1663 aa26.33■■□□□ 1.81
SEC22C-212ENST00000454141 NEUROD1Q13562 356 aa26.32■■□□□ 1.8
SEC22C-212ENST00000454141 TRPM1Q7Z4N2 1603 aa26.32■■□□□ 1.8
SEC22C-212ENST00000454141 PHRF1Q9P1Y6 1649 aaKnown RBP26.32■■□□□ 1.8
SEC22C-212ENST00000454141 PPIP5K1Q6PFW1 1433 aa26.31■■□□□ 1.8
SEC22C-212ENST00000454141 BRWD3Q6RI45 1802 aa26.3■■□□□ 1.8
SEC22C-212ENST00000454141 KIAA0232Q92628 1395 aa26.3■■□□□ 1.8
SEC22C-212ENST00000454141 BLMP54132 1417 aaPredicted RBP26.3■■□□□ 1.8
SEC22C-212ENST00000454141 NUTM2GQ5VZR2 741 aa26.29■■□□□ 1.8
SEC22C-212ENST00000454141 CABP2Q9NPB3 220 aa26.29■■□□□ 1.8
SEC22C-212ENST00000454141 A0A0G2JS52 829 aa26.27■■□□□ 1.8
SEC22C-212ENST00000454141 MYT1Q01538 1121 aa26.27■■□□□ 1.8
SEC22C-212ENST00000454141 FAM98CQ17RN3 349 aaKnown RBP26.27■■□□□ 1.8
SEC22C-212ENST00000454141 KRT27Q7Z3Y8 459 aa26.27■■□□□ 1.8
SEC22C-212ENST00000454141 ROCK2O75116 1388 aaKnown RBP26.27■■□□□ 1.8
SEC22C-212ENST00000454141 SPATA31A5Q5VU36 1347 aa26.25■■□□□ 1.79
SEC22C-212ENST00000454141 SPATA31A7Q8IWB4 1347 aa26.25■■□□□ 1.79
SEC22C-212ENST00000454141 CHRNA2Q15822 529 aa26.24■■□□□ 1.79
SEC22C-212ENST00000454141 ABTB2Q8N961 1025 aa26.24■■□□□ 1.79
SEC22C-212ENST00000454141 NRKQ7Z2Y5 1582 aa26.24■■□□□ 1.79
SEC22C-212ENST00000454141 ZC3H6P61129 1189 aaKnown RBP26.23■■□□□ 1.79
SEC22C-212ENST00000454141 BRD4O60885 1362 aaPredicted RBP26.22■■□□□ 1.79
SEC22C-212ENST00000454141 USP19O94966 1318 aa26.22■■□□□ 1.79
SEC22C-212ENST00000454141 EVC2Q86UK5 1308 aa26.22■■□□□ 1.79
SEC22C-212ENST00000454141 CABP1Q9NZU7 370 aa26.2■■□□□ 1.78
SEC22C-212ENST00000454141 ZRANB1Q9UGI0 708 aa26.2■■□□□ 1.78
SEC22C-212ENST00000454141 USP6P35125 1406 aa26.2■■□□□ 1.78
SEC22C-212ENST00000454141 SF3B2Q13435 895 aaKnown RBP26.19■■□□□ 1.78
SEC22C-212ENST00000454141 CPDO75976 1380 aa26.19■■□□□ 1.78
SEC22C-212ENST00000454141 THSD7AQ9UPZ6 1657 aa26.19■■□□□ 1.78
SEC22C-212ENST00000454141 SRCAPQ6ZRS2 3230 aa26.18■■□□□ 1.78
SEC22C-212ENST00000454141 NLRP13Q86W25 1043 aa26.18■■□□□ 1.78
SEC22C-212ENST00000454141 STRN4Q9NRL3 753 aa26.18■■□□□ 1.78
SEC22C-212ENST00000454141 SPATA31A1Q5TZJ5 1347 aa26.17■■□□□ 1.78
SEC22C-212ENST00000454141 DEFB132Q7Z7B7 95 aa26.16■■□□□ 1.78
SEC22C-212ENST00000454141 SSH2Q76I76 1423 aa26.14■■□□□ 1.78
SEC22C-212ENST00000454141 GCP02774 474 aa26.14■■□□□ 1.78
SEC22C-212ENST00000454141 LMO7Q8WWI1 1683 aa26.13■■□□□ 1.77
SEC22C-212ENST00000454141 CAMTA1Q9Y6Y1 1673 aa26.13■■□□□ 1.77
SEC22C-212ENST00000454141 EVA1CP58658 441 aa26.11■■□□□ 1.77
SEC22C-212ENST00000454141 TONSLQ96HA7 1378 aa26.1■■□□□ 1.77
SEC22C-212ENST00000454141 SLIT3O75094 1523 aa26.1■■□□□ 1.77
SEC22C-212ENST00000454141 NLRP6P59044 892 aa26.1■■□□□ 1.77
SEC22C-212ENST00000454141 SBNO2Q9Y2G9 1366 aa26.09■■□□□ 1.77
SEC22C-212ENST00000454141 FAM182BQ5T319 152 aa26.09■■□□□ 1.77
SEC22C-212ENST00000454141 CARD11Q9BXL7 1154 aa26.08■■□□□ 1.77
SEC22C-212ENST00000454141 USP35Q9P2H5 1018 aa26.08■■□□□ 1.77
SEC22C-212ENST00000454141 PIK3C2AO00443 1686 aa26.08■■□□□ 1.77
SEC22C-212ENST00000454141 BAG6P46379 1132 aa26.07■■□□□ 1.76
SEC22C-212ENST00000454141 LARP1Q6PKG0 1096 aaKnown RBP26.07■■□□□ 1.76
SEC22C-212ENST00000454141 ZNF692Q9BU19 519 aaPredicted RBP26.07■■□□□ 1.76
SEC22C-212ENST00000454141 BARGINQ6ZT62 677 aa26.06■■□□□ 1.76
SEC22C-212ENST00000454141 COL5A2P05997 1499 aaPredicted RBP26.05■■□□□ 1.76
SEC22C-212ENST00000454141 RGPD1P0DJD0 1748 aa26.04■■□□□ 1.76
SEC22C-212ENST00000454141 TTC21BQ7Z4L5 1316 aa26.04■■□□□ 1.76
SEC22C-212ENST00000454141 AKAP12Q02952 1782 aa26.03■■□□□ 1.76
SEC22C-212ENST00000454141 ZBTB7CA1YPR0 619 aa26.03■■□□□ 1.76
SEC22C-212ENST00000454141 TCP11L2Q8N4U5 519 aa26.03■■□□□ 1.76
SEC22C-212ENST00000454141 AATKQ6ZMQ8 1374 aa26.03■■□□□ 1.76
SEC22C-212ENST00000454141 CPSF1Q10570 1443 aaKnown RBP26.03■■□□□ 1.76
SEC22C-212ENST00000454141 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
SEC22C-212ENST00000454141 TTC21AQ8NDW8 1320 aa26.02■■□□□ 1.76
SEC22C-212ENST00000454141 KTN1Q86UP2 1357 aaKnown RBP26■■□□□ 1.75
SEC22C-212ENST00000454141 THRAP3Q9Y2W1 955 aaKnown RBP26■■□□□ 1.75
SEC22C-212ENST00000454141 DISP2A7MBM2 1401 aa25.99■■□□□ 1.75
SEC22C-212ENST00000454141 CRB1P82279 1406 aa25.99■■□□□ 1.75
SEC22C-212ENST00000454141 FAM196AQ6ZSG2 479 aa25.99■■□□□ 1.75
SEC22C-212ENST00000454141 TNS1Q9HBL0 1735 aaKnown RBP25.98■■□□□ 1.75
SEC22C-212ENST00000454141 EN1Q05925 392 aaPredicted RBP25.97■■□□□ 1.75
SEC22C-212ENST00000454141 PDE3BQ13370 1112 aa25.97■■□□□ 1.75
SEC22C-212ENST00000454141 KCNH5Q8NCM2 988 aa25.96■■□□□ 1.75
SEC22C-212ENST00000454141 MON2Q7Z3U7 1717 aa25.95■■□□□ 1.74
SEC22C-212ENST00000454141 COL18A1P39060 1754 aa25.94■■□□□ 1.74
SEC22C-212ENST00000454141 CD163L1Q9NR16 1453 aa25.93■■□□□ 1.74
SEC22C-212ENST00000454141 TRIM37O94972 964 aa25.93■■□□□ 1.74
SEC22C-212ENST00000454141 ARHGEF25Q86VW2 580 aa25.93■■□□□ 1.74
SEC22C-212ENST00000454141 PARP4Q9UKK3 1724 aaKnown RBP25.93■■□□□ 1.74
SEC22C-212ENST00000454141 NFAT5O94916 1531 aa25.93■■□□□ 1.74
SEC22C-212ENST00000454141 SOX12O15370 315 aa25.92■■□□□ 1.74
SEC22C-212ENST00000454141 AXIN2Q9Y2T1 843 aa25.92■■□□□ 1.74
SEC22C-212ENST00000454141 TOM1L2Q6ZVM7 507 aa25.91■■□□□ 1.74
SEC22C-212ENST00000454141 TMC1Q8TDI8 760 aa25.91■■□□□ 1.74
SEC22C-212ENST00000454141 WDR17Q8IZU2 1322 aa25.9■■□□□ 1.74
SEC22C-212ENST00000454141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.89■■□□□ 1.74
SEC22C-212ENST00000454141 USP31Q70CQ4 1352 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms