RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 TULP4Q9NRJ4 1543 aa8.23□□□□□ -1.09
MSH6-205ENST00000454137 XRN1Q8IZH2 1706 aaKnown RBP8.23□□□□□ -1.09
MSH6-205ENST00000454137 PTCH1Q13635 1447 aa8.22□□□□□ -1.09
MSH6-205ENST00000454137 PDAP1Q13442 181 aaKnown RBP8.22□□□□□ -1.09
MSH6-205ENST00000454137 RALBP1Q15311 655 aa8.22□□□□□ -1.09
MSH6-205ENST00000454137 NUTM2DQ5VT03 806 aaPredicted RBP8.22□□□□□ -1.09
MSH6-205ENST00000454137 ANKLE2Q86XL3 938 aa8.22□□□□□ -1.09
MSH6-205ENST00000454137 METP08581 1390 aa8.22□□□□□ -1.09
MSH6-205ENST00000454137 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
MSH6-205ENST00000454137 PAK3O75914 559 aaPredicted RBP8.21□□□□□ -1.1
MSH6-205ENST00000454137 PRKAR2AP13861 404 aaKnown RBP8.2□□□□□ -1.1
MSH6-205ENST00000454137 PARD3Q8TEW0 1356 aa8.2□□□□□ -1.1
MSH6-205ENST00000454137 PRKCSHP14314 528 aaPredicted RBP8.19□□□□□ -1.1
MSH6-205ENST00000454137 TPRNQ4KMQ1 711 aa8.19□□□□□ -1.1
MSH6-205ENST00000454137 PRAM1Q96QH2 718 aa8.19□□□□□ -1.1
MSH6-205ENST00000454137 PANK3Q9H999 370 aa8.19□□□□□ -1.1
MSH6-205ENST00000454137 POGKQ9P215 609 aa8.19□□□□□ -1.1
MSH6-205ENST00000454137 FXR2P51116 673 aaKnown RBP eCLIP8.18□□□□□ -1.1
MSH6-205ENST00000454137 ZNF579Q8NAF0 562 aaKnown RBP8.18□□□□□ -1.1
MSH6-205ENST00000454137 ANKRD36BQ8N2N9 1353 aa8.18□□□□□ -1.1
MSH6-205ENST00000454137 NWD1Q149M9 1564 aa8.18□□□□□ -1.1
MSH6-205ENST00000454137 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.17□□□□□ -1.1
MSH6-205ENST00000454137 CCDC184Q52MB2 194 aa8.17□□□□□ -1.1
MSH6-205ENST00000454137 STK26Q9P289 416 aa8.17□□□□□ -1.1
MSH6-205ENST00000454137 KNSTRNQ9Y448 316 aa8.17□□□□□ -1.1
MSH6-205ENST00000454137 CCDC61Q9Y6R9 512 aa8.17□□□□□ -1.1
MSH6-205ENST00000454137 BRD4O60885 1362 aaPredicted RBP8.17□□□□□ -1.1
MSH6-205ENST00000454137 NSD2O96028 1365 aa8.17□□□□□ -1.1
MSH6-205ENST00000454137 INSRP06213 1382 aa8.17□□□□□ -1.1
MSH6-205ENST00000454137 NPHP4O75161 1426 aaPredicted RBP8.17□□□□□ -1.1
MSH6-205ENST00000454137 PTPRUQ92729 1446 aa8.17□□□□□ -1.1
MSH6-205ENST00000454137 ATP7BP35670 1465 aa8.17□□□□□ -1.1
MSH6-205ENST00000454137 ITSN1Q15811 1721 aa8.16□□□□□ -1.1
MSH6-205ENST00000454137 MYBBP1AQ9BQG0 1328 aaKnown RBP8.16□□□□□ -1.1
MSH6-205ENST00000454137 ROBO2Q9HCK4 1378 aa8.16□□□□□ -1.1
MSH6-205ENST00000454137 ANKRD26Q9UPS8 1709 aa8.16□□□□□ -1.1
MSH6-205ENST00000454137 AKAP12Q02952 1782 aa8.15□□□□□ -1.1
MSH6-205ENST00000454137 TOPAZ1Q8N9V7 1692 aa8.15□□□□□ -1.1
MSH6-205ENST00000454137 NCOA3Q9Y6Q9 1424 aa8.15□□□□□ -1.1
MSH6-205ENST00000454137 WASLO00401 505 aaPredicted RBP8.15□□□□□ -1.1
MSH6-205ENST00000454137 NEFLP07196 543 aa8.15□□□□□ -1.1
MSH6-205ENST00000454137 CDK19Q9BWU1 502 aa8.15□□□□□ -1.1
MSH6-205ENST00000454137 TERF2IPQ9NYB0 399 aa8.15□□□□□ -1.1
MSH6-205ENST00000454137 AMOTL2Q9Y2J4 779 aa8.15□□□□□ -1.1
MSH6-205ENST00000454137 NKTRP30414 1462 aaKnown RBP8.14□□□□□ -1.11
MSH6-205ENST00000454137 PLEKHH1Q9ULM0 1364 aa8.14□□□□□ -1.11
MSH6-205ENST00000454137 KDM4FA0A1W2PPD8 638 aa8.14□□□□□ -1.11
MSH6-205ENST00000454137 PSEN1P49768 467 aa8.14□□□□□ -1.11
MSH6-205ENST00000454137 WAPLQ7Z5K2 1190 aa8.14□□□□□ -1.11
MSH6-205ENST00000454137 NLRP13Q86W25 1043 aa8.14□□□□□ -1.11
MSH6-205ENST00000454137 MON2Q7Z3U7 1717 aa8.14□□□□□ -1.11
MSH6-205ENST00000454137 CDC42BPGQ6DT37 1551 aa8.14□□□□□ -1.11
MSH6-205ENST00000454137 CD163L1Q9NR16 1453 aa8.13□□□□□ -1.11
MSH6-205ENST00000454137 CPSF1Q10570 1443 aaKnown RBP8.13□□□□□ -1.11
MSH6-205ENST00000454137 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
MSH6-205ENST00000454137 CGNL1Q0VF96 1302 aa8.13□□□□□ -1.11
MSH6-205ENST00000454137 MINK1Q8N4C8 1332 aaPredicted RBP8.13□□□□□ -1.11
MSH6-205ENST00000454137 SRPK2P78362 688 aaKnown RBP8.13□□□□□ -1.11
MSH6-205ENST00000454137 CNGB1Q14028 1251 aaPredicted RBP8.13□□□□□ -1.11
MSH6-205ENST00000454137 SLC26A8Q96RN1 970 aa8.13□□□□□ -1.11
MSH6-205ENST00000454137 MRS2Q9HD23 443 aa8.13□□□□□ -1.11
MSH6-205ENST00000454137 PCDHB8Q9UN66 801 aa8.13□□□□□ -1.11
MSH6-205ENST00000454137 PCDHB13Q9Y5F0 798 aa8.13□□□□□ -1.11
MSH6-205ENST00000454137 LMTK3Q96Q04 1460 aa8.13□□□□□ -1.11
MSH6-205ENST00000454137 KIF20BQ96Q89 1820 aa8.13□□□□□ -1.11
MSH6-205ENST00000454137 FMN2Q9NZ56 1722 aa8.12□□□□□ -1.11
MSH6-205ENST00000454137 PLEKHG3A1L390 1219 aa8.12□□□□□ -1.11
MSH6-205ENST00000454137 KCNA6P17658 529 aa8.12□□□□□ -1.11
MSH6-205ENST00000454137 CARD14Q9BXL6 1004 aa8.12□□□□□ -1.11
MSH6-205ENST00000454137 SLC12A5Q9H2X9 1139 aa8.12□□□□□ -1.11
MSH6-205ENST00000454137 CABP2Q9NPB3 220 aa8.12□□□□□ -1.11
MSH6-205ENST00000454137 HDGFL2Q7Z4V5 671 aaPredicted RBP8.11□□□□□ -1.11
MSH6-205ENST00000454137 WDR70Q9NW82 654 aa8.11□□□□□ -1.11
MSH6-205ENST00000454137 STRCQ7RTU9 1775 aa8.11□□□□□ -1.11
MSH6-205ENST00000454137 EDC4Q6P2E9 1401 aaKnown RBP8.11□□□□□ -1.11
MSH6-205ENST00000454137 NSD3Q9BZ95 1437 aa8.11□□□□□ -1.11
MSH6-205ENST00000454137 A0A1W2PP64 1363 aa8.1□□□□□ -1.11
MSH6-205ENST00000454137 NALCNQ8IZF0 1738 aa8.1□□□□□ -1.11
MSH6-205ENST00000454137 CHRDL2Q6WN34 429 aa8.1□□□□□ -1.11
MSH6-205ENST00000454137 TMC1Q8TDI8 760 aa8.1□□□□□ -1.11
MSH6-205ENST00000454137 NUDT16Q96DE0 195 aaKnown RBP8.1□□□□□ -1.11
MSH6-205ENST00000454137 ADGRL3Q9HAR2 1447 aa8.1□□□□□ -1.11
MSH6-205ENST00000454137 USP54Q70EL1 1684 aa8.09□□□□□ -1.11
MSH6-205ENST00000454137 SAFB2Q14151 953 aaKnown RBP eCLIP8.09□□□□□ -1.11
MSH6-205ENST00000454137 CC2D1BQ5T0F9 858 aaKnown RBP8.09□□□□□ -1.11
MSH6-205ENST00000454137 FAM9BQ8IZU0 186 aa8.09□□□□□ -1.11
MSH6-205ENST00000454137 PNISRQ8TF01 805 aaKnown RBP8.09□□□□□ -1.11
MSH6-205ENST00000454137 DCCP43146 1447 aa8.09□□□□□ -1.11
MSH6-205ENST00000454137 PPIP5K1Q6PFW1 1433 aa8.09□□□□□ -1.11
MSH6-205ENST00000454137 NRKQ7Z2Y5 1582 aa8.09□□□□□ -1.11
MSH6-205ENST00000454137 POLR3AO14802 1390 aaPredicted RBP8.09□□□□□ -1.12
MSH6-205ENST00000454137 NCKAP5LQ9HCH0 1330 aa8.08□□□□□ -1.12
MSH6-205ENST00000454137 PPP2R1AP30153 589 aa8.08□□□□□ -1.12
MSH6-205ENST00000454137 HNRNPUQ00839 825 aaKnown RBP eCLIP8.08□□□□□ -1.12
MSH6-205ENST00000454137 CABP1Q9NZU7 370 aa8.08□□□□□ -1.12
MSH6-205ENST00000454137 RGPD8O14715 1765 aaPredicted RBP8.07□□□□□ -1.12
MSH6-205ENST00000454137 SSH2Q76I76 1423 aa8.07□□□□□ -1.12
MSH6-205ENST00000454137 SOX12O15370 315 aa8.07□□□□□ -1.12
MSH6-205ENST00000454137 PIP4P2Q8N4L2 257 aa8.07□□□□□ -1.12
MSH6-205ENST00000454137 KIF12Q96FN5 646 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms