RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 NUTM2AQ8IVF1 878 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P15-201ENST00000453854 DGAT1O75907 488 aa7.07□□□□□ -1.28
HMGB1P15-201ENST00000453854 USP17L8P0C7I0 530 aa7.07□□□□□ -1.28
HMGB1P15-201ENST00000453854 GRIPAP1Q4V328 841 aa7.07□□□□□ -1.28
HMGB1P15-201ENST00000453854 PKDCCQ504Y2 493 aa7.07□□□□□ -1.28
HMGB1P15-201ENST00000453854 GJD4Q96KN9 370 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P15-201ENST00000453854 GDPD2Q9HCC8 539 aa7.07□□□□□ -1.28
HMGB1P15-201ENST00000453854 FAM187AA6NFU0 413 aa7.06□□□□□ -1.28
HMGB1P15-201ENST00000453854 POTECB2RU33 542 aa7.06□□□□□ -1.28
HMGB1P15-201ENST00000453854 MMP16P51512 607 aa7.06□□□□□ -1.28
HMGB1P15-201ENST00000453854 SYMPKQ92797 1274 aaKnown RBP7.06□□□□□ -1.28
HMGB1P15-201ENST00000453854 SERPINA10Q9UK55 444 aa7.06□□□□□ -1.28
HMGB1P15-201ENST00000453854 MTMR2Q13614 643 aa7.05□□□□□ -1.28
HMGB1P15-201ENST00000453854 Q3C1V9 767 aa7.05□□□□□ -1.28
HMGB1P15-201ENST00000453854 ZNF787Q6DD87 383 aa7.05□□□□□ -1.28
HMGB1P15-201ENST00000453854 USB1Q9BQ65 265 aaKnown RBP7.05□□□□□ -1.28
HMGB1P15-201ENST00000453854 PRM3Q9NNZ6 103 aa7.05□□□□□ -1.28
HMGB1P15-201ENST00000453854 ZNF330Q9Y3S2 320 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P15-201ENST00000453854 ST8SIA5O15466 376 aa7.04□□□□□ -1.28
HMGB1P15-201ENST00000453854 DXOO77932 396 aaKnown RBP7.04□□□□□ -1.28
HMGB1P15-201ENST00000453854 TOR4AQ9NXH8 423 aa7.04□□□□□ -1.28
HMGB1P15-201ENST00000453854 TBC1D2BQ9UPU7 963 aa7.04□□□□□ -1.28
HMGB1P15-201ENST00000453854 CD2BP2O95400 341 aaKnown RBP7.03□□□□□ -1.28
HMGB1P15-201ENST00000453854 CTDSPL2Q05D32 466 aa7.03□□□□□ -1.28
HMGB1P15-201ENST00000453854 TRIM34Q9BYJ4 488 aa7.03□□□□□ -1.28
HMGB1P15-201ENST00000453854 CFAP99D6REC4 459 aa7.02□□□□□ -1.29
HMGB1P15-201ENST00000453854 GPR37L1O60883 481 aa7.02□□□□□ -1.29
HMGB1P15-201ENST00000453854 WWC1Q8IX03 1113 aa7.02□□□□□ -1.29
HMGB1P15-201ENST00000453854 NDUFB9Q9Y6M9 179 aa7.02□□□□□ -1.29
HMGB1P15-201ENST00000453854 ABL2P42684 1182 aa7.01□□□□□ -1.29
HMGB1P15-201ENST00000453854 TRIM32Q13049 653 aa7.01□□□□□ -1.29
HMGB1P15-201ENST00000453854 IRF5Q13568 498 aa7.01□□□□□ -1.29
HMGB1P15-201ENST00000453854 HELBQ8NG08 1087 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P15-201ENST00000453854 CCDC97Q96F63 343 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P15-201ENST00000453854 HMX1Q9NP08 348 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P15-201ENST00000453854 AAASQ9NRG9 546 aa7.01□□□□□ -1.29
HMGB1P15-201ENST00000453854 DACH1Q9UI36 760 aa7.01□□□□□ -1.29
HMGB1P15-201ENST00000453854 C6orf229H3BNL8 230 aa6.99□□□□□ -1.29
HMGB1P15-201ENST00000453854 ZBTB24O43167 697 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P15-201ENST00000453854 CCDC24Q8N4L8 307 aa6.99□□□□□ -1.29
HMGB1P15-201ENST00000453854 LRRN4Q8WUT4 740 aa6.99□□□□□ -1.29
HMGB1P15-201ENST00000453854 ZNF775Q96BV0 537 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P15-201ENST00000453854 POM121CA8CG34 1229 aa6.98□□□□□ -1.29
HMGB1P15-201ENST00000453854 WNT7AO00755 349 aa6.98□□□□□ -1.29
HMGB1P15-201ENST00000453854 SKOR1P84550 965 aa6.98□□□□□ -1.29
HMGB1P15-201ENST00000453854 DESI1Q6ICB0 168 aa6.98□□□□□ -1.29
HMGB1P15-201ENST00000453854 RETREG3Q86VR2 466 aa6.98□□□□□ -1.29
HMGB1P15-201ENST00000453854 CYP4X1Q8N118 509 aa6.98□□□□□ -1.29
HMGB1P15-201ENST00000453854 PRR7Q8TB68 274 aa6.98□□□□□ -1.29
HMGB1P15-201ENST00000453854 MRGPRX2Q96LB1 330 aa6.98□□□□□ -1.29
HMGB1P15-201ENST00000453854 AVPP01185 164 aa6.97□□□□□ -1.29
HMGB1P15-201ENST00000453854 JUNDP17535 347 aa6.97□□□□□ -1.29
HMGB1P15-201ENST00000453854 WASHC4Q2M389 1173 aa6.97□□□□□ -1.29
HMGB1P15-201ENST00000453854 PTCRAQ6ISU1 281 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P15-201ENST00000453854 J3QL48 77 aa6.96□□□□□ -1.3
HMGB1P15-201ENST00000453854 SMPD1P17405 629 aa6.96□□□□□ -1.3
HMGB1P15-201ENST00000453854 CRIPAKQ8N1N5 446 aa6.96□□□□□ -1.3
HMGB1P15-201ENST00000453854 GLMNQ92990 594 aa6.96□□□□□ -1.3
HMGB1P15-201ENST00000453854 CALR3Q96L12 384 aaKnown RBP6.96□□□□□ -1.3
HMGB1P15-201ENST00000453854 TTC24A2A3L6 582 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P15-201ENST00000453854 PER1O15534 1290 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P15-201ENST00000453854 ADAMTS19Q8TE59 1207 aa6.95□□□□□ -1.3
HMGB1P15-201ENST00000453854 EPS8L1Q8TE68 723 aa6.95□□□□□ -1.3
HMGB1P15-201ENST00000453854 LYPD8Q6UX82 237 aa6.94□□□□□ -1.3
HMGB1P15-201ENST00000453854 SNIP1Q8TAD8 396 aaKnown RBP6.94□□□□□ -1.3
HMGB1P15-201ENST00000453854 TSC1Q92574 1164 aa6.94□□□□□ -1.3
HMGB1P15-201ENST00000453854 TRIM26Q12899 539 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P15-201ENST00000453854 RC3H1Q5TC82 1133 aaKnown RBP6.93□□□□□ -1.3
HMGB1P15-201ENST00000453854 NUDT12Q9BQG2 462 aa6.93□□□□□ -1.3
HMGB1P15-201ENST00000453854 ALG2Q9H553 416 aa6.93□□□□□ -1.3
HMGB1P15-201ENST00000453854 PPP1R15AO75807 674 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P15-201ENST00000453854 PDIA4P13667 645 aaKnown RBP6.92□□□□□ -1.3
HMGB1P15-201ENST00000453854 HDGFL1Q5TGJ6 251 aa6.92□□□□□ -1.3
HMGB1P15-201ENST00000453854 GMPR2Q9P2T1 348 aaKnown RBP6.92□□□□□ -1.3
HMGB1P15-201ENST00000453854 AXIN1O15169 862 aa6.91□□□□□ -1.3
HMGB1P15-201ENST00000453854 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P15-201ENST00000453854 NR6A1Q15406 480 aa6.91□□□□□ -1.3
HMGB1P15-201ENST00000453854 HPS1Q92902 700 aa6.91□□□□□ -1.3
HMGB1P15-201ENST00000453854 TRAIPQ9BWF2 469 aa6.91□□□□□ -1.3
HMGB1P15-201ENST00000453854 SOX11P35716 441 aa6.9□□□□□ -1.3
HMGB1P15-201ENST00000453854 WNT7BP56706 349 aa6.9□□□□□ -1.3
HMGB1P15-201ENST00000453854 VAC14Q08AM6 782 aa6.9□□□□□ -1.3
HMGB1P15-201ENST00000453854 CTC1Q2NKJ3 1217 aa6.9□□□□□ -1.3
HMGB1P15-201ENST00000453854 SIAH2O43255 324 aa6.89□□□□□ -1.31
HMGB1P15-201ENST00000453854 CCNYL3P0C7X3 344 aa6.89□□□□□ -1.31
HMGB1P15-201ENST00000453854 SH3BP2P78314 561 aa6.89□□□□□ -1.31
HMGB1P15-201ENST00000453854 SRPK2P78362 688 aaKnown RBP6.89□□□□□ -1.31
HMGB1P15-201ENST00000453854 CFAP70Q5T0N1 1121 aa6.89□□□□□ -1.31
HMGB1P15-201ENST00000453854 F12P00748 615 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P15-201ENST00000453854 PTPRNQ16849 979 aa6.88□□□□□ -1.31
HMGB1P15-201ENST00000453854 UNC93B1Q9H1C4 597 aa6.88□□□□□ -1.31
HMGB1P15-201ENST00000453854 EVA1BQ9NVM1 165 aa6.88□□□□□ -1.31
HMGB1P15-201ENST00000453854 PODXL2Q9NZ53 605 aa6.88□□□□□ -1.31
HMGB1P15-201ENST00000453854 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P15-201ENST00000453854 PPP1R12CQ9BZL4 782 aa6.87□□□□□ -1.31
HMGB1P15-201ENST00000453854 ALDH1A1P00352 501 aa6.86□□□□□ -1.31
HMGB1P15-201ENST00000453854 LINC01559Q495D7 138 aa6.86□□□□□ -1.31
HMGB1P15-201ENST00000453854 RETREG2Q8NC44 543 aa6.86□□□□□ -1.31
HMGB1P15-201ENST00000453854 PNMA1Q8ND90 353 aa6.86□□□□□ -1.31
HMGB1P15-201ENST00000453854 BAP1Q92560 729 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms