RNA–Protein interactions for RNA: ENST00000453707.6

CITED1-209, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CITED1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-209ENST00000453707 ACEP12821 1306 aa19.02■□□□□ 0.64
CITED1-209ENST00000453707 BLMP54132 1417 aaPredicted RBP19.02■□□□□ 0.64
CITED1-209ENST00000453707 ONECUT3O60422 494 aaPredicted RBP19.02■□□□□ 0.64
CITED1-209ENST00000453707 ARHGEF28Q8N1W1 1705 aaKnown RBP19.02■□□□□ 0.63
CITED1-209ENST00000453707 PLCH1Q4KWH8 1693 aa19.01■□□□□ 0.63
CITED1-209ENST00000453707 TRPM3Q9HCF6 1732 aaPredicted RBP19.01■□□□□ 0.63
CITED1-209ENST00000453707 NWD2Q9ULI1 1742 aa19.01■□□□□ 0.63
CITED1-209ENST00000453707 NBPF8Q3BBV2 869 aa19.01■□□□□ 0.63
CITED1-209ENST00000453707 ATP7BP35670 1465 aa19.01■□□□□ 0.63
CITED1-209ENST00000453707 CENPJQ9HC77 1338 aaPredicted RBP19■□□□□ 0.63
CITED1-209ENST00000453707 ABCA3Q99758 1704 aa19■□□□□ 0.63
CITED1-209ENST00000453707 EVA1CP58658 441 aa18.99■□□□□ 0.63
CITED1-209ENST00000453707 ZC3H6P61129 1189 aaKnown RBP18.99■□□□□ 0.63
CITED1-209ENST00000453707 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
CITED1-209ENST00000453707 ABTB2Q8N961 1025 aa18.99■□□□□ 0.63
CITED1-209ENST00000453707 STRN4Q9NRL3 753 aa18.99■□□□□ 0.63
CITED1-209ENST00000453707 ITSN1Q15811 1721 aa18.98■□□□□ 0.63
CITED1-209ENST00000453707 PLEKHG3A1L390 1219 aa18.98■□□□□ 0.63
CITED1-209ENST00000453707 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
CITED1-209ENST00000453707 DEFB132Q7Z7B7 95 aa18.98■□□□□ 0.63
CITED1-209ENST00000453707 ALS2Q96Q42 1657 aa18.98■□□□□ 0.63
CITED1-209ENST00000453707 KIAA0232Q92628 1395 aa18.97■□□□□ 0.63
CITED1-209ENST00000453707 COL14A1Q05707 1796 aaKnown RBP18.97■□□□□ 0.63
CITED1-209ENST00000453707 L3MBTL2Q969R5 705 aa18.97■□□□□ 0.63
CITED1-209ENST00000453707 CABP2Q9NPB3 220 aa18.97■□□□□ 0.63
CITED1-209ENST00000453707 KIAA1210Q9ULL0 1709 aa18.96■□□□□ 0.63
CITED1-209ENST00000453707 SPATA31A5Q5VU36 1347 aa18.96■□□□□ 0.63
CITED1-209ENST00000453707 SPATA31A7Q8IWB4 1347 aa18.96■□□□□ 0.63
CITED1-209ENST00000453707 POLR3AO14802 1390 aaPredicted RBP18.95■□□□□ 0.62
CITED1-209ENST00000453707 BAG6P46379 1132 aa18.95■□□□□ 0.62
CITED1-209ENST00000453707 SIN3AQ96ST3 1273 aa18.95■□□□□ 0.62
CITED1-209ENST00000453707 NLRP13Q86W25 1043 aa18.94■□□□□ 0.62
CITED1-209ENST00000453707 USP35Q9P2H5 1018 aa18.94■□□□□ 0.62
CITED1-209ENST00000453707 PPIP5K1Q6PFW1 1433 aa18.93■□□□□ 0.62
CITED1-209ENST00000453707 EP400Q96L91 3159 aa18.92■□□□□ 0.62
CITED1-209ENST00000453707 ZBTB7CA1YPR0 619 aa18.92■□□□□ 0.62
CITED1-209ENST00000453707 BRWD3Q6RI45 1802 aa18.92■□□□□ 0.62
CITED1-209ENST00000453707 FAM182BQ5T319 152 aa18.91■□□□□ 0.62
CITED1-209ENST00000453707 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
CITED1-209ENST00000453707 EVC2Q86UK5 1308 aa18.91■□□□□ 0.62
CITED1-209ENST00000453707 NRAPQ86VF7 1730 aa18.91■□□□□ 0.62
CITED1-209ENST00000453707 SPATA31A1Q5TZJ5 1347 aa18.9■□□□□ 0.62
CITED1-209ENST00000453707 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
CITED1-209ENST00000453707 GCP02774 474 aa18.88■□□□□ 0.61
CITED1-209ENST00000453707 NLRP6P59044 892 aa18.87■□□□□ 0.61
CITED1-209ENST00000453707 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
CITED1-209ENST00000453707 TOPAZ1Q8N9V7 1692 aa18.86■□□□□ 0.61
CITED1-209ENST00000453707 BRD4O60885 1362 aaPredicted RBP18.85■□□□□ 0.61
CITED1-209ENST00000453707 EN1Q05925 392 aaPredicted RBP18.85■□□□□ 0.61
CITED1-209ENST00000453707 LARP1Q6PKG0 1096 aaKnown RBP18.85■□□□□ 0.61
CITED1-209ENST00000453707 FAM196AQ6ZSG2 479 aa18.85■□□□□ 0.61
CITED1-209ENST00000453707 CRYBG1Q9Y4K1 1723 aa18.85■□□□□ 0.61
CITED1-209ENST00000453707 PHRF1Q9P1Y6 1649 aaKnown RBP18.85■□□□□ 0.61
CITED1-209ENST00000453707 USP19O94966 1318 aa18.84■□□□□ 0.61
CITED1-209ENST00000453707 TCP11L2Q8N4U5 519 aa18.84■□□□□ 0.61
CITED1-209ENST00000453707 SSH2Q76I76 1423 aa18.83■□□□□ 0.61
CITED1-209ENST00000453707 CPDO75976 1380 aa18.83■□□□□ 0.61
CITED1-209ENST00000453707 QRICH2Q9H0J4 1663 aa18.83■□□□□ 0.61
CITED1-209ENST00000453707 BARGINQ6ZT62 677 aa18.83■□□□□ 0.6
CITED1-209ENST00000453707 ZNF692Q9BU19 519 aaPredicted RBP18.83■□□□□ 0.6
CITED1-209ENST00000453707 TRIM37O94972 964 aa18.82■□□□□ 0.6
CITED1-209ENST00000453707 USP6P35125 1406 aa18.82■□□□□ 0.6
CITED1-209ENST00000453707 PSDA5PKW4 1024 aaPredicted RBP18.81■□□□□ 0.6
CITED1-209ENST00000453707 THRAP3Q9Y2W1 955 aaKnown RBP18.81■□□□□ 0.6
CITED1-209ENST00000453707 APBA3O96018 575 aa18.79■□□□□ 0.6
CITED1-209ENST00000453707 CARD11Q9BXL7 1154 aa18.79■□□□□ 0.6
CITED1-209ENST00000453707 NRKQ7Z2Y5 1582 aa18.79■□□□□ 0.6
CITED1-209ENST00000453707 SOX12O15370 315 aa18.78■□□□□ 0.6
CITED1-209ENST00000453707 TOM1L2Q6ZVM7 507 aa18.78■□□□□ 0.6
CITED1-209ENST00000453707 THSD7AQ9UPZ6 1657 aa18.78■□□□□ 0.6
CITED1-209ENST00000453707 CAMTA1Q9Y6Y1 1673 aa18.78■□□□□ 0.6
CITED1-209ENST00000453707 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
CITED1-209ENST00000453707 EZH2Q15910 746 aaKnown RBP18.77■□□□□ 0.6
CITED1-209ENST00000453707 KCNH5Q8NCM2 988 aa18.77■□□□□ 0.6
CITED1-209ENST00000453707 TTC21BQ7Z4L5 1316 aa18.76■□□□□ 0.59
CITED1-209ENST00000453707 TONSLQ96HA7 1378 aa18.76■□□□□ 0.59
CITED1-209ENST00000453707 RGPD1P0DJD0 1748 aa18.75■□□□□ 0.59
CITED1-209ENST00000453707 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
CITED1-209ENST00000453707 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
CITED1-209ENST00000453707 COL5A2P05997 1499 aaPredicted RBP18.74■□□□□ 0.59
CITED1-209ENST00000453707 AATKQ6ZMQ8 1374 aa18.74■□□□□ 0.59
CITED1-209ENST00000453707 R3HDM1Q15032 1099 aaKnown RBP18.74■□□□□ 0.59
CITED1-209ENST00000453707 TMC1Q8TDI8 760 aa18.74■□□□□ 0.59
CITED1-209ENST00000453707 CRB1P82279 1406 aa18.74■□□□□ 0.59
CITED1-209ENST00000453707 KTN1Q86UP2 1357 aaKnown RBP18.73■□□□□ 0.59
CITED1-209ENST00000453707 C11orf95C9JLR9 678 aaPredicted RBP18.73■□□□□ 0.59
CITED1-209ENST00000453707 SRCAPQ6ZRS2 3230 aa18.73■□□□□ 0.59
CITED1-209ENST00000453707 DISP2A7MBM2 1401 aa18.72■□□□□ 0.59
CITED1-209ENST00000453707 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
CITED1-209ENST00000453707 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
CITED1-209ENST00000453707 DDB1Q16531 1140 aa18.71■□□□□ 0.59
CITED1-209ENST00000453707 NBPF14Q5TI25 921 aa18.71■□□□□ 0.59
CITED1-209ENST00000453707 HDGFL2Q7Z4V5 671 aaPredicted RBP18.71■□□□□ 0.59
CITED1-209ENST00000453707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.71■□□□□ 0.59
CITED1-209ENST00000453707 CAMKK2Q96RR4 588 aa18.71■□□□□ 0.59
CITED1-209ENST00000453707 SLIT3O75094 1523 aa18.69■□□□□ 0.58
CITED1-209ENST00000453707 ARHGEF25Q86VW2 580 aa18.69■□□□□ 0.58
CITED1-209ENST00000453707 AXIN2Q9Y2T1 843 aa18.69■□□□□ 0.58
CITED1-209ENST00000453707 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
CITED1-209ENST00000453707 PARD3Q8TEW0 1356 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms