RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 POLR3AO14802 1390 aaPredicted RBP24.43■■□□□ 1.5
TNFRSF4-202ENST00000453580 PLCH1Q4KWH8 1693 aa24.43■■□□□ 1.5
TNFRSF4-202ENST00000453580 ROCK2O75116 1388 aaKnown RBP24.42■■□□□ 1.5
TNFRSF4-202ENST00000453580 PLEKHG5O94827 1062 aa24.41■■□□□ 1.5
TNFRSF4-202ENST00000453580 VPS72Q15906 364 aa24.41■■□□□ 1.5
TNFRSF4-202ENST00000453580 BRD4O60885 1362 aaPredicted RBP24.41■■□□□ 1.5
TNFRSF4-202ENST00000453580 ACEP12821 1306 aa24.4■■□□□ 1.5
TNFRSF4-202ENST00000453580 COL14A1Q05707 1796 aaKnown RBP24.39■■□□□ 1.5
TNFRSF4-202ENST00000453580 EVC2Q86UK5 1308 aa24.39■■□□□ 1.5
TNFRSF4-202ENST00000453580 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.49
TNFRSF4-202ENST00000453580 RALGAPBQ86X10 1494 aa24.38■■□□□ 1.49
TNFRSF4-202ENST00000453580 FAM83GA6ND36 823 aa24.37■■□□□ 1.49
TNFRSF4-202ENST00000453580 CCDC125Q86Z20 511 aa24.37■■□□□ 1.49
TNFRSF4-202ENST00000453580 CCDC9Q9Y3X0 531 aaKnown RBP24.37■■□□□ 1.49
TNFRSF4-202ENST00000453580 TONSLQ96HA7 1378 aa24.37■■□□□ 1.49
TNFRSF4-202ENST00000453580 PPIP5K1Q6PFW1 1433 aa24.36■■□□□ 1.49
TNFRSF4-202ENST00000453580 CRYBG1Q9Y4K1 1723 aa24.35■■□□□ 1.49
TNFRSF4-202ENST00000453580 GLI3P10071 1580 aa24.34■■□□□ 1.49
TNFRSF4-202ENST00000453580 PRDM11Q9NQV5 511 aa24.34■■□□□ 1.49
TNFRSF4-202ENST00000453580 CABP2Q9NPB3 220 aa24.33■■□□□ 1.49
TNFRSF4-202ENST00000453580 BTG4Q9NY30 223 aa24.33■■□□□ 1.49
TNFRSF4-202ENST00000453580 ABTB2Q8N961 1025 aa24.32■■□□□ 1.48
TNFRSF4-202ENST00000453580 NLRP13Q86W25 1043 aa24.31■■□□□ 1.48
TNFRSF4-202ENST00000453580 NRAPQ86VF7 1730 aa24.3■■□□□ 1.48
TNFRSF4-202ENST00000453580 ONECUT3O60422 494 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF4-202ENST00000453580 PHRF1Q9P1Y6 1649 aaKnown RBP24.29■■□□□ 1.48
TNFRSF4-202ENST00000453580 SEPT12Q8IYM1 358 aa24.28■■□□□ 1.48
TNFRSF4-202ENST00000453580 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
TNFRSF4-202ENST00000453580 CARD11Q9BXL7 1154 aa24.27■■□□□ 1.48
TNFRSF4-202ENST00000453580 CABP1Q9NZU7 370 aa24.27■■□□□ 1.48
TNFRSF4-202ENST00000453580 SBNO2Q9Y2G9 1366 aa24.26■■□□□ 1.47
TNFRSF4-202ENST00000453580 KIAA0232Q92628 1395 aa24.25■■□□□ 1.47
TNFRSF4-202ENST00000453580 BRWD3Q6RI45 1802 aa24.24■■□□□ 1.47
TNFRSF4-202ENST00000453580 A0A0G2JS52 829 aa24.24■■□□□ 1.47
TNFRSF4-202ENST00000453580 MYT1Q01538 1121 aa24.24■■□□□ 1.47
TNFRSF4-202ENST00000453580 NUTM2GQ5VZR2 741 aa24.24■■□□□ 1.47
TNFRSF4-202ENST00000453580 USP6P35125 1406 aa24.24■■□□□ 1.47
TNFRSF4-202ENST00000453580 SLC24A1O60721 1099 aa24.23■■□□□ 1.47
TNFRSF4-202ENST00000453580 KRT27Q7Z3Y8 459 aa24.23■■□□□ 1.47
TNFRSF4-202ENST00000453580 CPDO75976 1380 aa24.22■■□□□ 1.47
TNFRSF4-202ENST00000453580 USP19O94966 1318 aa24.22■■□□□ 1.47
TNFRSF4-202ENST00000453580 SPATA31A5Q5VU36 1347 aa24.22■■□□□ 1.47
TNFRSF4-202ENST00000453580 SPATA31A7Q8IWB4 1347 aa24.22■■□□□ 1.47
TNFRSF4-202ENST00000453580 SF3B2Q13435 895 aaKnown RBP24.22■■□□□ 1.47
TNFRSF4-202ENST00000453580 ZC3H6P61129 1189 aaKnown RBP24.21■■□□□ 1.47
TNFRSF4-202ENST00000453580 BLMP54132 1417 aaPredicted RBP24.2■■□□□ 1.46
TNFRSF4-202ENST00000453580 EVA1CP58658 441 aa24.2■■□□□ 1.46
TNFRSF4-202ENST00000453580 NRKQ7Z2Y5 1582 aa24.2■■□□□ 1.46
TNFRSF4-202ENST00000453580 FAM98CQ17RN3 349 aaKnown RBP24.19■■□□□ 1.46
TNFRSF4-202ENST00000453580 GCP02774 474 aa24.18■■□□□ 1.46
TNFRSF4-202ENST00000453580 NLRP6P59044 892 aa24.18■■□□□ 1.46
TNFRSF4-202ENST00000453580 TTC21AQ8NDW8 1320 aa24.17■■□□□ 1.46
TNFRSF4-202ENST00000453580 CHRNA2Q15822 529 aa24.17■■□□□ 1.46
TNFRSF4-202ENST00000453580 AKAP12Q02952 1782 aa24.16■■□□□ 1.46
TNFRSF4-202ENST00000453580 STRN4Q9NRL3 753 aa24.15■■□□□ 1.46
TNFRSF4-202ENST00000453580 SPATA31A1Q5TZJ5 1347 aa24.14■■□□□ 1.46
TNFRSF4-202ENST00000453580 PUS7Q96PZ0 661 aaKnown RBP24.14■■□□□ 1.45
TNFRSF4-202ENST00000453580 SSH2Q76I76 1423 aa24.13■■□□□ 1.45
TNFRSF4-202ENST00000453580 KCNH5Q8NCM2 988 aa24.13■■□□□ 1.45
TNFRSF4-202ENST00000453580 ZRANB1Q9UGI0 708 aa24.12■■□□□ 1.45
TNFRSF4-202ENST00000453580 KTN1Q86UP2 1357 aaKnown RBP24.12■■□□□ 1.45
TNFRSF4-202ENST00000453580 TTC21BQ7Z4L5 1316 aa24.11■■□□□ 1.45
TNFRSF4-202ENST00000453580 CPSF1Q10570 1443 aaKnown RBP24.11■■□□□ 1.45
TNFRSF4-202ENST00000453580 SLIT3O75094 1523 aa24.11■■□□□ 1.45
TNFRSF4-202ENST00000453580 LMO7Q8WWI1 1683 aa24.11■■□□□ 1.45
TNFRSF4-202ENST00000453580 THSD7AQ9UPZ6 1657 aa24.11■■□□□ 1.45
TNFRSF4-202ENST00000453580 BARGINQ6ZT62 677 aa24.1■■□□□ 1.45
TNFRSF4-202ENST00000453580 TIMELESSQ9UNS1 1208 aa24.1■■□□□ 1.45
TNFRSF4-202ENST00000453580 THRAP3Q9Y2W1 955 aaKnown RBP24.1■■□□□ 1.45
TNFRSF4-202ENST00000453580 PIK3C2AO00443 1686 aa24.09■■□□□ 1.45
TNFRSF4-202ENST00000453580 HDGFL2Q7Z4V5 671 aaPredicted RBP24.09■■□□□ 1.45
TNFRSF4-202ENST00000453580 CLSPNQ9HAW4 1339 aa24.09■■□□□ 1.45
TNFRSF4-202ENST00000453580 CAMTA1Q9Y6Y1 1673 aa24.08■■□□□ 1.45
TNFRSF4-202ENST00000453580 AATKQ6ZMQ8 1374 aa24.08■■□□□ 1.45
TNFRSF4-202ENST00000453580 TCP11L2Q8N4U5 519 aa24.07■■□□□ 1.44
TNFRSF4-202ENST00000453580 TERF2IPQ9NYB0 399 aa24.07■■□□□ 1.44
TNFRSF4-202ENST00000453580 MON2Q7Z3U7 1717 aa24.07■■□□□ 1.44
TNFRSF4-202ENST00000453580 NINLQ9Y2I6 1382 aa24.06■■□□□ 1.44
TNFRSF4-202ENST00000453580 BAG6P46379 1132 aa24.06■■□□□ 1.44
TNFRSF4-202ENST00000453580 TMC1Q8TDI8 760 aa24.06■■□□□ 1.44
TNFRSF4-202ENST00000453580 USP35Q9P2H5 1018 aa24.05■■□□□ 1.44
TNFRSF4-202ENST00000453580 RGPD1P0DJD0 1748 aa24.04■■□□□ 1.44
TNFRSF4-202ENST00000453580 ZBTB7CA1YPR0 619 aa24.04■■□□□ 1.44
TNFRSF4-202ENST00000453580 C11orf95C9JLR9 678 aaPredicted RBP24.04■■□□□ 1.44
TNFRSF4-202ENST00000453580 FAM196AQ6ZSG2 479 aa24.04■■□□□ 1.44
TNFRSF4-202ENST00000453580 COL5A2P05997 1499 aaPredicted RBP24.04■■□□□ 1.44
TNFRSF4-202ENST00000453580 CRB1P82279 1406 aa24.03■■□□□ 1.44
TNFRSF4-202ENST00000453580 PDE3BQ13370 1112 aa24.03■■□□□ 1.44
TNFRSF4-202ENST00000453580 LARP1Q6PKG0 1096 aaKnown RBP24.03■■□□□ 1.44
TNFRSF4-202ENST00000453580 EP400Q96L91 3159 aa24.02■■□□□ 1.44
TNFRSF4-202ENST00000453580 ST20-MTHFSA0A0A6YYL1 179 aa24■■□□□ 1.43
TNFRSF4-202ENST00000453580 ABCC6O95255 1503 aa24■■□□□ 1.43
TNFRSF4-202ENST00000453580 ARHGEF25Q86VW2 580 aa23.99■■□□□ 1.43
TNFRSF4-202ENST00000453580 USP31Q70CQ4 1352 aa23.99■■□□□ 1.43
TNFRSF4-202ENST00000453580 EDC4Q6P2E9 1401 aaKnown RBP23.99■■□□□ 1.43
TNFRSF4-202ENST00000453580 TOM1L2Q6ZVM7 507 aa23.98■■□□□ 1.43
TNFRSF4-202ENST00000453580 CDCA7Q9BWT1 371 aaPredicted RBP23.98■■□□□ 1.43
TNFRSF4-202ENST00000453580 USP54Q70EL1 1684 aa23.98■■□□□ 1.43
TNFRSF4-202ENST00000453580 COL18A1P39060 1754 aa23.97■■□□□ 1.43
TNFRSF4-202ENST00000453580 CDCA8Q53HL2 280 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms