RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, human

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC117-206	ENST00000453543	RBM6	P78332	1123 aa	Known RBP	42.79	■■■■■ 4.44
CCDC117-206	ENST00000453543	ATRN	O75882	1429 aa		42.77	■■■■■ 4.44
CCDC117-206	ENST00000453543	EVC2	Q86UK5	1308 aa		42.76	■■■■■ 4.44
CCDC117-206	ENST00000453543	TRPC5	Q9UL62	973 aa	Predicted RBP	42.76	■■■■■ 4.44
CCDC117-206	ENST00000453543	SLIT2	O94813	1529 aa		42.75	■■■■■ 4.43
CCDC117-206	ENST00000453543	CRYBG1	Q9Y4K1	1723 aa		42.74	■■■■■ 4.43
CCDC117-206	ENST00000453543	RGS12	O14924	1447 aa		42.72	■■■■■ 4.43
CCDC117-206	ENST00000453543	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	42.71	■■■■■ 4.43
CCDC117-206	ENST00000453543	PLCH1	Q4KWH8	1693 aa		42.69	■■■■■ 4.42
CCDC117-206	ENST00000453543	CABP1	Q9NZU7	370 aa		42.68	■■■■■ 4.42
CCDC117-206	ENST00000453543	UNC5CL	Q8IV45	518 aa		42.65	■■■■■ 4.42
CCDC117-206	ENST00000453543	SBNO2	Q9Y2G9	1366 aa		42.65	■■■■■ 4.42
CCDC117-206	ENST00000453543	NWD2	Q9ULI1	1742 aa		42.63	■■■■■ 4.41
CCDC117-206	ENST00000453543	NUTM2G	Q5VZR2	741 aa		42.62	■■■■■ 4.41
CCDC117-206	ENST00000453543	PHRF1	Q9P1Y6	1649 aa	Known RBP	42.61	■■■■■ 4.41
CCDC117-206	ENST00000453543	FAM83G	A6ND36	823 aa		42.61	■■■■■ 4.41
CCDC117-206	ENST00000453543	CLSPN	Q9HAW4	1339 aa		42.59	■■■■■ 4.41
CCDC117-206	ENST00000453543	USP6	P35125	1406 aa		42.57	■■■■■ 4.41
CCDC117-206	ENST00000453543	GJD4	Q96KN9	370 aa	Predicted RBP	42.57	■■■■■ 4.41
CCDC117-206	ENST00000453543	COL14A1	Q05707	1796 aa	Known RBP	42.55	■■■■■ 4.4
CCDC117-206	ENST00000453543	ABTB2	Q8N961	1025 aa		42.55	■■■■■ 4.4
CCDC117-206	ENST00000453543	GLI3	P10071	1580 aa		42.55	■■■■■ 4.4
CCDC117-206	ENST00000453543	ATAD2	Q6PL18	1390 aa		42.54	■■■■■ 4.4
CCDC117-206	ENST00000453543	NRAP	Q86VF7	1730 aa		42.52	■■■■■ 4.4
CCDC117-206	ENST00000453543	BRD4	O60885	1362 aa	Predicted RBP	42.52	■■■■■ 4.4
CCDC117-206	ENST00000453543	AKAP12	Q02952	1782 aa		42.5	■■■■■ 4.39
CCDC117-206	ENST00000453543	NRK	Q7Z2Y5	1582 aa		42.48	■■■■■ 4.39
CCDC117-206	ENST00000453543	BTG4	Q9NY30	223 aa		42.48	■■■■■ 4.39
CCDC117-206	ENST00000453543	SSH2	Q76I76	1423 aa		42.47	■■■■■ 4.39
CCDC117-206	ENST00000453543	VPS72	Q15906	364 aa		42.47	■■■■■ 4.39
CCDC117-206	ENST00000453543	PRDM11	Q9NQV5	511 aa		42.47	■■■■■ 4.39
CCDC117-206	ENST00000453543	KIAA0232	Q92628	1395 aa		42.47	■■■■■ 4.39
CCDC117-206	ENST00000453543	USP19	O94966	1318 aa		42.46	■■■■■ 4.39
CCDC117-206	ENST00000453543	UPF1	Q92900	1129 aa	Known RBP eCLIP	42.46	■■■■■ 4.39
CCDC117-206	ENST00000453543	TIMELESS	Q9UNS1	1208 aa		42.45	■■■■■ 4.39
CCDC117-206	ENST00000453543	ST20-MTHFS	A0A0A6YYL1	179 aa		42.44	■■■■■ 4.38
CCDC117-206	ENST00000453543	ZC3H6	P61129	1189 aa	Known RBP	42.44	■■■■■ 4.38
CCDC117-206	ENST00000453543	NLRP13	Q86W25	1043 aa		42.42	■■■■■ 4.38
CCDC117-206	ENST00000453543	TESK2	Q96S53	571 aa		42.42	■■■■■ 4.38
CCDC117-206	ENST00000453543	CCDC9	Q9Y3X0	531 aa	Known RBP	42.42	■■■■■ 4.38
CCDC117-206	ENST00000453543	CPSF1	Q10570	1443 aa	Known RBP	42.42	■■■■■ 4.38
CCDC117-206	ENST00000453543	PIK3C2A	O00443	1686 aa		42.41	■■■■■ 4.38
CCDC117-206	ENST00000453543	CHRNA2	Q15822	529 aa		42.41	■■■■■ 4.38
CCDC117-206	ENST00000453543	CCER1	Q8TC90	406 aa	Predicted RBP	42.4	■■■■■ 4.38
CCDC117-206	ENST00000453543	ZNF692	Q9BU19	519 aa	Predicted RBP	42.39	■■■■■ 4.38
CCDC117-206	ENST00000453543	USP47	Q96K76	1375 aa		42.37	■■■■■ 4.37
CCDC117-206	ENST00000453543	MON2	Q7Z3U7	1717 aa		42.35	■■■■■ 4.37
CCDC117-206	ENST00000453543	NLRP6	P59044	892 aa		42.35	■■■■■ 4.37
CCDC117-206	ENST00000453543	TTC21B	Q7Z4L5	1316 aa		42.35	■■■■■ 4.37
CCDC117-206	ENST00000453543	KTN1	Q86UP2	1357 aa	Known RBP	42.35	■■■■■ 4.37
CCDC117-206	ENST00000453543	CD163L1	Q9NR16	1453 aa		42.34	■■■■■ 4.37
CCDC117-206	ENST00000453543	GC	P02774	474 aa		42.33	■■■■■ 4.37
CCDC117-206	ENST00000453543	SLIT3	O75094	1523 aa		42.32	■■■■■ 4.37
CCDC117-206	ENST00000453543	CPD	O75976	1380 aa		42.32	■■■■■ 4.37
CCDC117-206	ENST00000453543	TMC1	Q8TDI8	760 aa		42.32	■■■■■ 4.37
CCDC117-206	ENST00000453543	PUS7	Q96PZ0	661 aa	Known RBP	42.29	■■■■■ 4.36
CCDC117-206	ENST00000453543	SLC12A5	Q9H2X9	1139 aa		42.29	■■■■■ 4.36
CCDC117-206	ENST00000453543	BRWD3	Q6RI45	1802 aa		42.29	■■■■■ 4.36
CCDC117-206	ENST00000453543	EP400	Q96L91	3159 aa		42.28	■■■■■ 4.36
CCDC117-206	ENST00000453543	TTC21A	Q8NDW8	1320 aa		42.27	■■■■■ 4.36
CCDC117-206	ENST00000453543	LMO7	Q8WWI1	1683 aa		42.27	■■■■■ 4.36
CCDC117-206	ENST00000453543	SEPT12	Q8IYM1	358 aa		42.26	■■■■■ 4.36
CCDC117-206	ENST00000453543	ONECUT3	O60422	494 aa	Predicted RBP	42.25	■■■■■ 4.35
CCDC117-206	ENST00000453543	CAMTA1	Q9Y6Y1	1673 aa		42.25	■■■■■ 4.35
CCDC117-206	ENST00000453543	SPATA31A5	Q5VU36	1347 aa		42.24	■■■■■ 4.35
CCDC117-206	ENST00000453543	SPATA31A7	Q8IWB4	1347 aa		42.24	■■■■■ 4.35
CCDC117-206	ENST00000453543	STRN4	Q9NRL3	753 aa		42.23	■■■■■ 4.35
CCDC117-206	ENST00000453543	FAM98C	Q17RN3	349 aa	Known RBP	42.22	■■■■■ 4.35
CCDC117-206	ENST00000453543	SLC24A1	O60721	1099 aa		42.21	■■■■■ 4.35
CCDC117-206	ENST00000453543		A0A1W2PP64	1363 aa		42.2	■■■■■ 4.35
CCDC117-206	ENST00000453543	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	42.2	■■■■■ 4.35
CCDC117-206	ENST00000453543	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	42.19	■■■■■ 4.34
CCDC117-206	ENST00000453543	ZBTB7C	A1YPR0	619 aa		42.17	■■■■■ 4.34
CCDC117-206	ENST00000453543		A0A0G2JS52	829 aa		42.16	■■■■■ 4.34
CCDC117-206	ENST00000453543	MYT1	Q01538	1121 aa		42.16	■■■■■ 4.34
CCDC117-206	ENST00000453543	TERF2IP	Q9NYB0	399 aa		42.16	■■■■■ 4.34
CCDC117-206	ENST00000453543	TMF1	P82094	1093 aa		42.15	■■■■■ 4.34
CCDC117-206	ENST00000453543	ZRANB1	Q9UGI0	708 aa		42.15	■■■■■ 4.34
CCDC117-206	ENST00000453543	SPATA31A1	Q5TZJ5	1347 aa		42.15	■■■■■ 4.34
CCDC117-206	ENST00000453543	NINL	Q9Y2I6	1382 aa		42.14	■■■■■ 4.34
CCDC117-206	ENST00000453543	EDC4	Q6P2E9	1401 aa	Known RBP	42.14	■■■■■ 4.34
CCDC117-206	ENST00000453543	EVA1C	P58658	441 aa		42.14	■■■■■ 4.34
CCDC117-206	ENST00000453543	SOX12	O15370	315 aa		42.12	■■■■■ 4.33
CCDC117-206	ENST00000453543	NME9	Q86XW9	330 aa		42.12	■■■■■ 4.33
CCDC117-206	ENST00000453543	THSD7A	Q9UPZ6	1657 aa		42.12	■■■■■ 4.33
CCDC117-206	ENST00000453543	USP54	Q70EL1	1684 aa		42.11	■■■■■ 4.33
CCDC117-206	ENST00000453543	AATK	Q6ZMQ8	1374 aa		42.11	■■■■■ 4.33
CCDC117-206	ENST00000453543	COL5A2	P05997	1499 aa	Predicted RBP	42.11	■■■■■ 4.33
CCDC117-206	ENST00000453543	COL18A1	P39060	1754 aa		42.1	■■■■■ 4.33
CCDC117-206	ENST00000453543	LARP1	Q6PKG0	1096 aa	Known RBP	42.1	■■■■■ 4.33
CCDC117-206	ENST00000453543	USP31	Q70CQ4	1352 aa		42.1	■■■■■ 4.33
CCDC117-206	ENST00000453543	NFAT5	O94916	1531 aa		42.1	■■■■■ 4.33
CCDC117-206	ENST00000453543	KCNH5	Q8NCM2	988 aa		42.09	■■■■■ 4.33
CCDC117-206	ENST00000453543	KRT27	Q7Z3Y8	459 aa		42.08	■■■■■ 4.33
CCDC117-206	ENST00000453543	USP35	Q9P2H5	1018 aa		42.06	■■■■■ 4.32
CCDC117-206	ENST00000453543	ARHGEF25	Q86VW2	580 aa		42.05	■■■■■ 4.32
CCDC117-206	ENST00000453543	ANKRD36B	Q8N2N9	1353 aa		42.01	■■■■■ 4.31
CCDC117-206	ENST00000453543	AXIN2	Q9Y2T1	843 aa		42	■■■■■ 4.31
CCDC117-206	ENST00000453543	RGPD5	Q99666	1765 aa		41.98	■■■■■ 4.31
CCDC117-206	ENST00000453543	OVOS2	A0A0J9YW53	1432 aa		41.97	■■■■■ 4.31

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms