RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 POLR3AO14802 1390 aaPredicted RBP21.29■■□□□ 1
SNX17-204ENST00000453453 PMFBP1Q8TBY8 1022 aa21.29■■□□□ 1
SNX17-204ENST00000453453 PHF8Q9UPP1 1060 aa21.29■■□□□ 1
SNX17-204ENST00000453453 NRKQ7Z2Y5 1582 aa21.28■■□□□ 1
SNX17-204ENST00000453453 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
SNX17-204ENST00000453453 USP6P35125 1406 aa21.26■□□□□ 0.99
SNX17-204ENST00000453453 MORC1Q86VD1 984 aa21.26■□□□□ 0.99
SNX17-204ENST00000453453 C1orf167Q5SNV9 1468 aa21.26■□□□□ 0.99
SNX17-204ENST00000453453 MST1RQ04912 1400 aa21.26■□□□□ 0.99
SNX17-204ENST00000453453 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
SNX17-204ENST00000453453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.25■□□□□ 0.99
SNX17-204ENST00000453453 NLRP13Q86W25 1043 aa21.24■□□□□ 0.99
SNX17-204ENST00000453453 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
SNX17-204ENST00000453453 LTBP4Q8N2S1 1624 aa21.23■□□□□ 0.99
SNX17-204ENST00000453453 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
SNX17-204ENST00000453453 FYB1O15117 783 aa21.22■□□□□ 0.99
SNX17-204ENST00000453453 BCL11AQ9H165 835 aa21.22■□□□□ 0.99
SNX17-204ENST00000453453 TTC21BQ7Z4L5 1316 aa21.22■□□□□ 0.99
SNX17-204ENST00000453453 TTC21AQ8NDW8 1320 aa21.22■□□□□ 0.99
SNX17-204ENST00000453453 GGNBP2Q9H3C7 697 aa21.21■□□□□ 0.99
SNX17-204ENST00000453453 PPP2R1AP30153 589 aa21.19■□□□□ 0.98
SNX17-204ENST00000453453 ORAI2Q96SN7 254 aa21.19■□□□□ 0.98
SNX17-204ENST00000453453 PSME1Q06323 249 aa21.18■□□□□ 0.98
SNX17-204ENST00000453453 SSH2Q76I76 1423 aa21.18■□□□□ 0.98
SNX17-204ENST00000453453 NME9Q86XW9 330 aa21.17■□□□□ 0.98
SNX17-204ENST00000453453 COG3Q96JB2 828 aa21.17■□□□□ 0.98
SNX17-204ENST00000453453 TNNT2P45379 298 aaPredicted RBP21.15■□□□□ 0.98
SNX17-204ENST00000453453 CCDC184Q52MB2 194 aa21.14■□□□□ 0.97
SNX17-204ENST00000453453 SLAIN2Q9P270 581 aa21.14■□□□□ 0.97
SNX17-204ENST00000453453 PIK3C2AO00443 1686 aa21.14■□□□□ 0.97
SNX17-204ENST00000453453 FOXO3O43524 673 aa21.13■□□□□ 0.97
SNX17-204ENST00000453453 PAK3O75914 559 aaPredicted RBP21.13■□□□□ 0.97
SNX17-204ENST00000453453 USP54Q70EL1 1684 aa21.12■□□□□ 0.97
SNX17-204ENST00000453453 NPHP3Q7Z494 1330 aa21.11■□□□□ 0.97
SNX17-204ENST00000453453 OVOS2A0A0J9YW53 1432 aa21.11■□□□□ 0.97
SNX17-204ENST00000453453 OVOS2Q6IE36 1432 aa21.11■□□□□ 0.97
SNX17-204ENST00000453453 TRPM3Q9HCF6 1732 aaPredicted RBP21.1■□□□□ 0.97
SNX17-204ENST00000453453 USP31Q70CQ4 1352 aa21.1■□□□□ 0.97
SNX17-204ENST00000453453 KRT28Q7Z3Y7 464 aa21.1■□□□□ 0.97
SNX17-204ENST00000453453 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
SNX17-204ENST00000453453 ABTB2Q8N961 1025 aa21.08■□□□□ 0.97
SNX17-204ENST00000453453 ZRANB1Q9UGI0 708 aa21.08■□□□□ 0.97
SNX17-204ENST00000453453 MAP2P11137 1827 aaKnown RBP21.08■□□□□ 0.96
SNX17-204ENST00000453453 BRINP3Q76B58 766 aa21.07■□□□□ 0.96
SNX17-204ENST00000453453 NLRP6P59044 892 aa21.07■□□□□ 0.96
SNX17-204ENST00000453453 FAM9BQ8IZU0 186 aa21.07■□□□□ 0.96
SNX17-204ENST00000453453 AATKQ6ZMQ8 1374 aa21.06■□□□□ 0.96
SNX17-204ENST00000453453 XPCQ01831 940 aaPredicted RBP21.06■□□□□ 0.96
SNX17-204ENST00000453453 MTHFSP49914 203 aa21.05■□□□□ 0.96
SNX17-204ENST00000453453 SBNO1A3KN83 1393 aa21.05■□□□□ 0.96
SNX17-204ENST00000453453 MARF1Q9Y4F3 1742 aaKnown RBP21.05■□□□□ 0.96
SNX17-204ENST00000453453 PNISRQ8TF01 805 aaKnown RBP21.04■□□□□ 0.96
SNX17-204ENST00000453453 ALS2Q96Q42 1657 aa21.04■□□□□ 0.96
SNX17-204ENST00000453453 NHSL1Q5SYE7 1610 aa21.04■□□□□ 0.96
SNX17-204ENST00000453453 PXDNQ92626 1479 aa21.03■□□□□ 0.96
SNX17-204ENST00000453453 WDR43Q15061 677 aaKnown RBP eCLIP21.03■□□□□ 0.96
SNX17-204ENST00000453453 IQSEC2Q5JU85 1478 aa21.03■□□□□ 0.96
SNX17-204ENST00000453453 LMOD2Q6P5Q4 547 aa21.02■□□□□ 0.96
SNX17-204ENST00000453453 PPP4R2Q9NY27 417 aa21.02■□□□□ 0.96
SNX17-204ENST00000453453 NUTM2GQ5VZR2 741 aa21.01■□□□□ 0.95
SNX17-204ENST00000453453 ROBO1Q9Y6N7 1651 aa21.01■□□□□ 0.95
SNX17-204ENST00000453453 TNS3Q68CZ2 1445 aa21■□□□□ 0.95
SNX17-204ENST00000453453 SMG6Q86US8 1419 aaKnown RBP21■□□□□ 0.95
SNX17-204ENST00000453453 HNRNPUQ00839 825 aaKnown RBP eCLIP21■□□□□ 0.95
SNX17-204ENST00000453453 DDX17Q92841 729 aaKnown RBP21■□□□□ 0.95
SNX17-204ENST00000453453 POLKQ9UBT6 870 aa21■□□□□ 0.95
SNX17-204ENST00000453453 CDK12Q9NYV4 1490 aaPredicted RBP20.99■□□□□ 0.95
SNX17-204ENST00000453453 TOM1O60784 492 aa20.99■□□□□ 0.95
SNX17-204ENST00000453453 ARHGEF10O15013 1369 aa20.98■□□□□ 0.95
SNX17-204ENST00000453453 PPM1GO15355 546 aaPredicted RBP20.98■□□□□ 0.95
SNX17-204ENST00000453453 MSH5O43196 834 aa20.98■□□□□ 0.95
SNX17-204ENST00000453453 SHPRHQ149N8 1683 aa20.98■□□□□ 0.95
SNX17-204ENST00000453453 KCNH5Q8NCM2 988 aa20.97■□□□□ 0.95
SNX17-204ENST00000453453 SOX12O15370 315 aa20.96■□□□□ 0.95
SNX17-204ENST00000453453 SOS2Q07890 1332 aaPredicted RBP20.96■□□□□ 0.95
SNX17-204ENST00000453453 SPATA31A3Q5VYP0 1347 aa20.96■□□□□ 0.95
SNX17-204ENST00000453453 SLIT3O75094 1523 aa20.96■□□□□ 0.95
SNX17-204ENST00000453453 RRS1Q15050 365 aaKnown RBP20.96■□□□□ 0.95
SNX17-204ENST00000453453 NUDCQ9Y266 331 aa20.96■□□□□ 0.95
SNX17-204ENST00000453453 EMILIN1Q9Y6C2 1016 aa20.96■□□□□ 0.95
SNX17-204ENST00000453453 INSRP06213 1382 aa20.95■□□□□ 0.94
SNX17-204ENST00000453453 FBLN1P23142 703 aa20.95■□□□□ 0.94
SNX17-204ENST00000453453 ERICH6Q7L0X2 663 aa20.95■□□□□ 0.94
SNX17-204ENST00000453453 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
SNX17-204ENST00000453453 AHDC1Q5TGY3 1603 aaPredicted RBP20.94■□□□□ 0.94
SNX17-204ENST00000453453 LTN1O94822 1766 aa20.94■□□□□ 0.94
SNX17-204ENST00000453453 PNPLA6Q8IY17 1366 aa20.94■□□□□ 0.94
SNX17-204ENST00000453453 USP19O94966 1318 aa20.94■□□□□ 0.94
SNX17-204ENST00000453453 KIF24Q5T7B8 1368 aa20.93■□□□□ 0.94
SNX17-204ENST00000453453 ZBED9Q6R2W3 1325 aa20.93■□□□□ 0.94
SNX17-204ENST00000453453 NFAT5O94916 1531 aa20.93■□□□□ 0.94
SNX17-204ENST00000453453 DIAPH1O60610 1272 aaKnown RBP20.93■□□□□ 0.94
SNX17-204ENST00000453453 MED1Q15648 1581 aaPredicted RBP20.92■□□□□ 0.94
SNX17-204ENST00000453453 PHRF1Q9P1Y6 1649 aaKnown RBP20.92■□□□□ 0.94
SNX17-204ENST00000453453 MAP3K19Q56UN5 1328 aa20.91■□□□□ 0.94
SNX17-204ENST00000453453 PEAK1Q9H792 1746 aa20.91■□□□□ 0.94
SNX17-204ENST00000453453 UBAP1LF5GYI3 381 aa20.91■□□□□ 0.94
SNX17-204ENST00000453453 AMPHP49418 695 aa20.91■□□□□ 0.94
SNX17-204ENST00000453453 CERKQ8TCT0 537 aa20.91■□□□□ 0.94
SNX17-204ENST00000453453 FLT4P35916 1363 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms