RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
HLA-DPA1-244ENST00000453337 KIF20BQ96Q89 1820 aa16.96■□□□□ 0.31
HLA-DPA1-244ENST00000453337 KIF1AQ12756 1690 aa16.96■□□□□ 0.31
HLA-DPA1-244ENST00000453337 GGNBP2Q9H3C7 697 aa16.95■□□□□ 0.3
HLA-DPA1-244ENST00000453337 ANKRD26Q9UPS8 1709 aa16.94■□□□□ 0.3
HLA-DPA1-244ENST00000453337 FOXO3O43524 673 aa16.94■□□□□ 0.3
HLA-DPA1-244ENST00000453337 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
HLA-DPA1-244ENST00000453337 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
HLA-DPA1-244ENST00000453337 PPP2R1AP30153 589 aa16.93■□□□□ 0.3
HLA-DPA1-244ENST00000453337 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
HLA-DPA1-244ENST00000453337 COG3Q96JB2 828 aa16.92■□□□□ 0.3
HLA-DPA1-244ENST00000453337 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
HLA-DPA1-244ENST00000453337 NME9Q86XW9 330 aa16.91■□□□□ 0.3
HLA-DPA1-244ENST00000453337 MRS2Q9HD23 443 aa16.91■□□□□ 0.3
HLA-DPA1-244ENST00000453337 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
HLA-DPA1-244ENST00000453337 NRKQ7Z2Y5 1582 aa16.9■□□□□ 0.3
HLA-DPA1-244ENST00000453337 BRINP3Q76B58 766 aa16.89■□□□□ 0.29
HLA-DPA1-244ENST00000453337 ABTB2Q8N961 1025 aa16.89■□□□□ 0.29
HLA-DPA1-244ENST00000453337 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
HLA-DPA1-244ENST00000453337 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
HLA-DPA1-244ENST00000453337 USP31Q70CQ4 1352 aa16.88■□□□□ 0.29
HLA-DPA1-244ENST00000453337 TOM1O60784 492 aa16.87■□□□□ 0.29
HLA-DPA1-244ENST00000453337 NLRP6P59044 892 aa16.87■□□□□ 0.29
HLA-DPA1-244ENST00000453337 MAP2P11137 1827 aaKnown RBP16.86■□□□□ 0.29
HLA-DPA1-244ENST00000453337 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
HLA-DPA1-244ENST00000453337 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
HLA-DPA1-244ENST00000453337 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
HLA-DPA1-244ENST00000453337 MTHFSP49914 203 aa16.84■□□□□ 0.29
HLA-DPA1-244ENST00000453337 XPCQ01831 940 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-244ENST00000453337 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
HLA-DPA1-244ENST00000453337 SBNO1A3KN83 1393 aa16.84■□□□□ 0.29
HLA-DPA1-244ENST00000453337 IQSEC2Q5JU85 1478 aa16.84■□□□□ 0.29
HLA-DPA1-244ENST00000453337 AATKQ6ZMQ8 1374 aa16.83■□□□□ 0.28
HLA-DPA1-244ENST00000453337 TRPM3Q9HCF6 1732 aaPredicted RBP16.82■□□□□ 0.28
HLA-DPA1-244ENST00000453337 PIK3C2AO00443 1686 aa16.82■□□□□ 0.28
HLA-DPA1-244ENST00000453337 OVOS2A0A0J9YW53 1432 aa16.82■□□□□ 0.28
HLA-DPA1-244ENST00000453337 OVOS2Q6IE36 1432 aa16.82■□□□□ 0.28
HLA-DPA1-244ENST00000453337 CERKQ8TCT0 537 aa16.82■□□□□ 0.28
HLA-DPA1-244ENST00000453337 PNISRQ8TF01 805 aaKnown RBP16.82■□□□□ 0.28
HLA-DPA1-244ENST00000453337 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
HLA-DPA1-244ENST00000453337 LMOD2Q6P5Q4 547 aa16.81■□□□□ 0.28
HLA-DPA1-244ENST00000453337 DDX17Q92841 729 aaKnown RBP16.81■□□□□ 0.28
HLA-DPA1-244ENST00000453337 SOS2Q07890 1332 aaPredicted RBP16.8■□□□□ 0.28
HLA-DPA1-244ENST00000453337 NUTM2GQ5VZR2 741 aa16.8■□□□□ 0.28
HLA-DPA1-244ENST00000453337 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
HLA-DPA1-244ENST00000453337 POLKQ9UBT6 870 aa16.8■□□□□ 0.28
HLA-DPA1-244ENST00000453337 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
HLA-DPA1-244ENST00000453337 FAM9BQ8IZU0 186 aa16.79■□□□□ 0.28
HLA-DPA1-244ENST00000453337 PXDNQ92626 1479 aa16.79■□□□□ 0.28
HLA-DPA1-244ENST00000453337 UBAP1LF5GYI3 381 aa16.78■□□□□ 0.28
HLA-DPA1-244ENST00000453337 ALS2Q96Q42 1657 aa16.78■□□□□ 0.28
HLA-DPA1-244ENST00000453337 NHSL1Q5SYE7 1610 aa16.78■□□□□ 0.28
HLA-DPA1-244ENST00000453337 ARHGEF10O15013 1369 aa16.77■□□□□ 0.28
HLA-DPA1-244ENST00000453337 WDR43Q15061 677 aaKnown RBP eCLIP16.77■□□□□ 0.28
HLA-DPA1-244ENST00000453337 ROBO1Q9Y6N7 1651 aa16.77■□□□□ 0.28
HLA-DPA1-244ENST00000453337 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
HLA-DPA1-244ENST00000453337 FBLN1P23142 703 aa16.76■□□□□ 0.27
HLA-DPA1-244ENST00000453337 NUDCQ9Y266 331 aa16.76■□□□□ 0.27
HLA-DPA1-244ENST00000453337 TNS3Q68CZ2 1445 aa16.76■□□□□ 0.27
HLA-DPA1-244ENST00000453337 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
HLA-DPA1-244ENST00000453337 INSRP06213 1382 aa16.76■□□□□ 0.27
HLA-DPA1-244ENST00000453337 RRS1Q15050 365 aaKnown RBP16.75■□□□□ 0.27
HLA-DPA1-244ENST00000453337 LRRC59Q96AG4 307 aaKnown RBP16.75■□□□□ 0.27
HLA-DPA1-244ENST00000453337 SOX12O15370 315 aa16.74■□□□□ 0.27
HLA-DPA1-244ENST00000453337 GCP02774 474 aa16.74■□□□□ 0.27
HLA-DPA1-244ENST00000453337 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
HLA-DPA1-244ENST00000453337 USP19O94966 1318 aa16.73■□□□□ 0.27
HLA-DPA1-244ENST00000453337 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
HLA-DPA1-244ENST00000453337 AMPHP49418 695 aa16.73■□□□□ 0.27
HLA-DPA1-244ENST00000453337 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
HLA-DPA1-244ENST00000453337 EMILIN1Q9Y6C2 1016 aa16.73■□□□□ 0.27
HLA-DPA1-244ENST00000453337 KIF24Q5T7B8 1368 aa16.73■□□□□ 0.27
HLA-DPA1-244ENST00000453337 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
HLA-DPA1-244ENST00000453337 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
HLA-DPA1-244ENST00000453337 MAP3K19Q56UN5 1328 aa16.71■□□□□ 0.27
HLA-DPA1-244ENST00000453337 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.27
HLA-DPA1-244ENST00000453337 ADAMTS8Q9UP79 889 aa16.71■□□□□ 0.27
HLA-DPA1-244ENST00000453337 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.27
HLA-DPA1-244ENST00000453337 SLIT3O75094 1523 aa16.7■□□□□ 0.26
HLA-DPA1-244ENST00000453337 LTN1O94822 1766 aa16.69■□□□□ 0.26
HLA-DPA1-244ENST00000453337 FLT4P35916 1363 aa16.68■□□□□ 0.26
HLA-DPA1-244ENST00000453337 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
HLA-DPA1-244ENST00000453337 ARHGEF25Q86VW2 580 aa16.68■□□□□ 0.26
HLA-DPA1-244ENST00000453337 IP6K1Q92551 441 aa16.68■□□□□ 0.26
HLA-DPA1-244ENST00000453337 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
HLA-DPA1-244ENST00000453337 PHLPP1O60346 1717 aa16.67■□□□□ 0.26
HLA-DPA1-244ENST00000453337 NFAT5O94916 1531 aa16.67■□□□□ 0.26
HLA-DPA1-244ENST00000453337 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
HLA-DPA1-244ENST00000453337 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
HLA-DPA1-244ENST00000453337 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
HLA-DPA1-244ENST00000453337 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
HLA-DPA1-244ENST00000453337 HOXC9P31274 260 aa16.66■□□□□ 0.26
HLA-DPA1-244ENST00000453337 IL13P35225 146 aa16.66■□□□□ 0.26
HLA-DPA1-244ENST00000453337 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-244ENST00000453337 MED1Q15648 1581 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-244ENST00000453337 HSP90AB2PQ58FF8 381 aa16.66■□□□□ 0.26
HLA-DPA1-244ENST00000453337 CABLES1Q8TDN4 633 aa16.66■□□□□ 0.26
HLA-DPA1-244ENST00000453337 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
HLA-DPA1-244ENST00000453337 RTL1A6NKG5 1358 aa16.65■□□□□ 0.26
HLA-DPA1-244ENST00000453337 ZC3H6P61129 1189 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms