RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 CCDC9Q9Y3X0 531 aaKnown RBP22.04■■□□□ 1.12
VCX3B-204ENST00000453306 WASLO00401 505 aaPredicted RBP22.03■■□□□ 1.12
VCX3B-204ENST00000453306 PLEKHG5O94827 1062 aa22.03■■□□□ 1.12
VCX3B-204ENST00000453306 GLI3P10071 1580 aa22.03■■□□□ 1.12
VCX3B-204ENST00000453306 C11orf95C9JLR9 678 aaPredicted RBP22.02■■□□□ 1.12
VCX3B-204ENST00000453306 CDK19Q9BWU1 502 aa22.02■■□□□ 1.12
VCX3B-204ENST00000453306 PRR36Q9H6K5 1346 aa22.02■■□□□ 1.12
VCX3B-204ENST00000453306 SRCAPQ6ZRS2 3230 aa22.01■■□□□ 1.11
VCX3B-204ENST00000453306 SBNO2Q9Y2G9 1366 aa22■■□□□ 1.11
VCX3B-204ENST00000453306 NWD2Q9ULI1 1742 aa22■■□□□ 1.11
VCX3B-204ENST00000453306 EP400Q96L91 3159 aa22■■□□□ 1.11
VCX3B-204ENST00000453306 BLMP54132 1417 aaPredicted RBP22■■□□□ 1.11
VCX3B-204ENST00000453306 SF3B2Q13435 895 aaKnown RBP22■■□□□ 1.11
VCX3B-204ENST00000453306 SEPT12Q8IYM1 358 aa22■■□□□ 1.11
VCX3B-204ENST00000453306 TULP4Q9NRJ4 1543 aa22■■□□□ 1.11
VCX3B-204ENST00000453306 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
VCX3B-204ENST00000453306 FAM83GA6ND36 823 aa21.98■■□□□ 1.11
VCX3B-204ENST00000453306 ONECUT3O60422 494 aaPredicted RBP21.98■■□□□ 1.11
VCX3B-204ENST00000453306 PLCH1Q4KWH8 1693 aa21.98■■□□□ 1.11
VCX3B-204ENST00000453306 NGDNQ8NEJ9 315 aaKnown RBP21.97■■□□□ 1.11
VCX3B-204ENST00000453306 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
VCX3B-204ENST00000453306 ABCA3Q99758 1704 aa21.96■■□□□ 1.11
VCX3B-204ENST00000453306 A0A0G2JS52 829 aa21.94■■□□□ 1.1
VCX3B-204ENST00000453306 MYT1Q01538 1121 aa21.94■■□□□ 1.1
VCX3B-204ENST00000453306 KRT27Q7Z3Y8 459 aa21.94■■□□□ 1.1
VCX3B-204ENST00000453306 PAK3O75914 559 aaPredicted RBP21.93■■□□□ 1.1
VCX3B-204ENST00000453306 EVC2Q86UK5 1308 aa21.93■■□□□ 1.1
VCX3B-204ENST00000453306 NUDT16Q96DE0 195 aaKnown RBP21.93■■□□□ 1.1
VCX3B-204ENST00000453306 TRPM3Q9HCF6 1732 aaPredicted RBP21.93■■□□□ 1.1
VCX3B-204ENST00000453306 BTG4Q9NY30 223 aa21.93■■□□□ 1.1
VCX3B-204ENST00000453306 SRPK2P78362 688 aaKnown RBP21.91■■□□□ 1.1
VCX3B-204ENST00000453306 ALS2Q96Q42 1657 aa21.91■■□□□ 1.1
VCX3B-204ENST00000453306 BRWD3Q6RI45 1802 aa21.9■■□□□ 1.1
VCX3B-204ENST00000453306 COL14A1Q05707 1796 aaKnown RBP21.89■■□□□ 1.1
VCX3B-204ENST00000453306 TMF1P82094 1093 aa21.89■■□□□ 1.09
VCX3B-204ENST00000453306 ATP7BP35670 1465 aa21.89■■□□□ 1.09
VCX3B-204ENST00000453306 FAM98CQ17RN3 349 aaKnown RBP21.88■■□□□ 1.09
VCX3B-204ENST00000453306 DEFB132Q7Z7B7 95 aa21.87■■□□□ 1.09
VCX3B-204ENST00000453306 PRDM11Q9NQV5 511 aa21.87■■□□□ 1.09
VCX3B-204ENST00000453306 ITSN1Q15811 1721 aa21.86■■□□□ 1.09
VCX3B-204ENST00000453306 PUS7Q96PZ0 661 aaKnown RBP21.86■■□□□ 1.09
VCX3B-204ENST00000453306 CCDC61Q9Y6R9 512 aa21.86■■□□□ 1.09
VCX3B-204ENST00000453306 NRAPQ86VF7 1730 aa21.86■■□□□ 1.09
VCX3B-204ENST00000453306 BAG6P46379 1132 aa21.85■■□□□ 1.09
VCX3B-204ENST00000453306 SLC12A5Q9H2X9 1139 aa21.85■■□□□ 1.09
VCX3B-204ENST00000453306 CABP1Q9NZU7 370 aa21.85■■□□□ 1.09
VCX3B-204ENST00000453306 KIF7Q2M1P5 1343 aa21.83■■□□□ 1.09
VCX3B-204ENST00000453306 SPATA31A5Q5VU36 1347 aa21.83■■□□□ 1.09
VCX3B-204ENST00000453306 SPATA31A7Q8IWB4 1347 aa21.83■■□□□ 1.09
VCX3B-204ENST00000453306 PLEKHG3A1L390 1219 aa21.83■■□□□ 1.09
VCX3B-204ENST00000453306 WASHC2AQ641Q2 1341 aa21.82■■□□□ 1.08
VCX3B-204ENST00000453306 SLC24A1O60721 1099 aa21.82■■□□□ 1.08
VCX3B-204ENST00000453306 POLR3AO14802 1390 aaPredicted RBP21.8■■□□□ 1.08
VCX3B-204ENST00000453306 PPIP5K1Q6PFW1 1433 aa21.8■■□□□ 1.08
VCX3B-204ENST00000453306 ACEP12821 1306 aa21.8■■□□□ 1.08
VCX3B-204ENST00000453306 KIAA0232Q92628 1395 aa21.79■■□□□ 1.08
VCX3B-204ENST00000453306 CRYBG1Q9Y4K1 1723 aa21.79■■□□□ 1.08
VCX3B-204ENST00000453306 CCDC7Q96M83 1385 aa21.78■■□□□ 1.08
VCX3B-204ENST00000453306 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
VCX3B-204ENST00000453306 TMC1Q8TDI8 760 aa21.77■■□□□ 1.08
VCX3B-204ENST00000453306 CD163L1Q9NR16 1453 aa21.77■■□□□ 1.07
VCX3B-204ENST00000453306 CDCA8Q53HL2 280 aa21.76■■□□□ 1.07
VCX3B-204ENST00000453306 SPATA31A1Q5TZJ5 1347 aa21.76■■□□□ 1.07
VCX3B-204ENST00000453306 EVA1CP58658 441 aa21.75■■□□□ 1.07
VCX3B-204ENST00000453306 ZC3H6P61129 1189 aaKnown RBP21.75■■□□□ 1.07
VCX3B-204ENST00000453306 CHRNA2Q15822 529 aa21.75■■□□□ 1.07
VCX3B-204ENST00000453306 NUTM2GQ5VZR2 741 aa21.75■■□□□ 1.07
VCX3B-204ENST00000453306 ABTB2Q8N961 1025 aa21.75■■□□□ 1.07
VCX3B-204ENST00000453306 STRN4Q9NRL3 753 aa21.75■■□□□ 1.07
VCX3B-204ENST00000453306 TOPAZ1Q8N9V7 1692 aa21.74■■□□□ 1.07
VCX3B-204ENST00000453306 PHRF1Q9P1Y6 1649 aaKnown RBP21.73■■□□□ 1.07
VCX3B-204ENST00000453306 CPSF1Q10570 1443 aaKnown RBP21.73■■□□□ 1.07
VCX3B-204ENST00000453306 CARD14Q9BXL6 1004 aa21.73■■□□□ 1.07
VCX3B-204ENST00000453306 THSD7AQ9UPZ6 1657 aa21.72■■□□□ 1.07
VCX3B-204ENST00000453306 RGPD1P0DJD0 1748 aa21.72■■□□□ 1.07
VCX3B-204ENST00000453306 FAM196AQ6ZSG2 479 aa21.71■■□□□ 1.07
VCX3B-204ENST00000453306 NLRP13Q86W25 1043 aa21.71■■□□□ 1.07
VCX3B-204ENST00000453306 BRD4O60885 1362 aaPredicted RBP21.71■■□□□ 1.07
VCX3B-204ENST00000453306 EN1Q05925 392 aaPredicted RBP21.7■■□□□ 1.06
VCX3B-204ENST00000453306 FAM182BQ5T319 152 aa21.7■■□□□ 1.06
VCX3B-204ENST00000453306 SSH2Q76I76 1423 aa21.7■■□□□ 1.06
VCX3B-204ENST00000453306 A0A1W2PP64 1363 aa21.69■■□□□ 1.06
VCX3B-204ENST00000453306 CPDO75976 1380 aa21.69■■□□□ 1.06
VCX3B-204ENST00000453306 ZNF316A6NFI3 1004 aaPredicted RBP21.68■■□□□ 1.06
VCX3B-204ENST00000453306 BARGINQ6ZT62 677 aa21.68■■□□□ 1.06
VCX3B-204ENST00000453306 PANK3Q9H999 370 aa21.68■■□□□ 1.06
VCX3B-204ENST00000453306 USP35Q9P2H5 1018 aa21.68■■□□□ 1.06
VCX3B-204ENST00000453306 DISP2A7MBM2 1401 aa21.68■■□□□ 1.06
VCX3B-204ENST00000453306 USP19O94966 1318 aa21.67■■□□□ 1.06
VCX3B-204ENST00000453306 PDE3BQ13370 1112 aa21.67■■□□□ 1.06
VCX3B-204ENST00000453306 LRP5O75197 1615 aa21.66■■□□□ 1.06
VCX3B-204ENST00000453306 USP6P35125 1406 aa21.66■■□□□ 1.06
VCX3B-204ENST00000453306 NINLQ9Y2I6 1382 aa21.66■■□□□ 1.06
VCX3B-204ENST00000453306 PSDA5PKW4 1024 aaPredicted RBP21.66■■□□□ 1.06
VCX3B-204ENST00000453306 GCP02774 474 aa21.66■■□□□ 1.06
VCX3B-204ENST00000453306 THRAP3Q9Y2W1 955 aaKnown RBP21.66■■□□□ 1.06
VCX3B-204ENST00000453306 MYOM1P52179 1685 aa21.66■■□□□ 1.06
VCX3B-204ENST00000453306 NRKQ7Z2Y5 1582 aa21.65■■□□□ 1.06
VCX3B-204ENST00000453306 ANKRD36BQ8N2N9 1353 aa21.65■■□□□ 1.06
VCX3B-204ENST00000453306 TCP11L2Q8N4U5 519 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms