RNA–Protein interactions for RNA: ENST00000452955.1

IMP4-205, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-205ENST00000452955 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
IMP4-205ENST00000452955 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
IMP4-205ENST00000452955 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
IMP4-205ENST00000452955 STRN4Q9NRL3 753 aa17.29■□□□□ 0.36
IMP4-205ENST00000452955 CCDC61Q9Y6R9 512 aa17.29■□□□□ 0.36
IMP4-205ENST00000452955 GLI3P10071 1580 aa17.28■□□□□ 0.36
IMP4-205ENST00000452955 ACEP12821 1306 aa17.28■□□□□ 0.36
IMP4-205ENST00000452955 ZBTB7CA1YPR0 619 aa17.28■□□□□ 0.36
IMP4-205ENST00000452955 EVA1CP58658 441 aa17.28■□□□□ 0.36
IMP4-205ENST00000452955 L3MBTL2Q969R5 705 aa17.28■□□□□ 0.36
IMP4-205ENST00000452955 ARHGEF28Q8N1W1 1705 aaKnown RBP17.27■□□□□ 0.36
IMP4-205ENST00000452955 DEFB132Q7Z7B7 95 aa17.27■□□□□ 0.36
IMP4-205ENST00000452955 ABTB2Q8N961 1025 aa17.27■□□□□ 0.36
IMP4-205ENST00000452955 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.27■□□□□ 0.35
IMP4-205ENST00000452955 PLCH1Q4KWH8 1693 aa17.26■□□□□ 0.35
IMP4-205ENST00000452955 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
IMP4-205ENST00000452955 CENPJQ9HC77 1338 aaPredicted RBP17.25■□□□□ 0.35
IMP4-205ENST00000452955 FAM182BQ5T319 152 aa17.25■□□□□ 0.35
IMP4-205ENST00000452955 USP35Q9P2H5 1018 aa17.25■□□□□ 0.35
IMP4-205ENST00000452955 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
IMP4-205ENST00000452955 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
IMP4-205ENST00000452955 ONECUT3O60422 494 aaPredicted RBP17.23■□□□□ 0.35
IMP4-205ENST00000452955 ITSN1Q15811 1721 aa17.23■□□□□ 0.35
IMP4-205ENST00000452955 NWD2Q9ULI1 1742 aa17.23■□□□□ 0.35
IMP4-205ENST00000452955 PLEKHG3A1L390 1219 aa17.22■□□□□ 0.35
IMP4-205ENST00000452955 KIAA0232Q92628 1395 aa17.22■□□□□ 0.35
IMP4-205ENST00000452955 ALS2Q96Q42 1657 aa17.22■□□□□ 0.35
IMP4-205ENST00000452955 ATP7BP35670 1465 aa17.21■□□□□ 0.35
IMP4-205ENST00000452955 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
IMP4-205ENST00000452955 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
IMP4-205ENST00000452955 BLMP54132 1417 aaPredicted RBP17.2■□□□□ 0.34
IMP4-205ENST00000452955 COL14A1Q05707 1796 aaKnown RBP17.2■□□□□ 0.34
IMP4-205ENST00000452955 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
IMP4-205ENST00000452955 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
IMP4-205ENST00000452955 SPATA31A5Q5VU36 1347 aa17.19■□□□□ 0.34
IMP4-205ENST00000452955 SPATA31A7Q8IWB4 1347 aa17.19■□□□□ 0.34
IMP4-205ENST00000452955 BAG6P46379 1132 aa17.17■□□□□ 0.34
IMP4-205ENST00000452955 NLRP6P59044 892 aa17.17■□□□□ 0.34
IMP4-205ENST00000452955 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
IMP4-205ENST00000452955 POLR3AO14802 1390 aaPredicted RBP17.15■□□□□ 0.34
IMP4-205ENST00000452955 SOX12O15370 315 aa17.15■□□□□ 0.34
IMP4-205ENST00000452955 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
IMP4-205ENST00000452955 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
IMP4-205ENST00000452955 NRAPQ86VF7 1730 aa17.15■□□□□ 0.34
IMP4-205ENST00000452955 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
IMP4-205ENST00000452955 GCP02774 474 aa17.14■□□□□ 0.33
IMP4-205ENST00000452955 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.33
IMP4-205ENST00000452955 SPATA31A1Q5TZJ5 1347 aa17.14■□□□□ 0.33
IMP4-205ENST00000452955 PSDA5PKW4 1024 aaPredicted RBP17.13■□□□□ 0.33
IMP4-205ENST00000452955 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
IMP4-205ENST00000452955 TRIM37O94972 964 aa17.11■□□□□ 0.33
IMP4-205ENST00000452955 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
IMP4-205ENST00000452955 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
IMP4-205ENST00000452955 CRYBG1Q9Y4K1 1723 aa17.1■□□□□ 0.33
IMP4-205ENST00000452955 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
IMP4-205ENST00000452955 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
IMP4-205ENST00000452955 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
IMP4-205ENST00000452955 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
IMP4-205ENST00000452955 APBA3O96018 575 aa17.08■□□□□ 0.32
IMP4-205ENST00000452955 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.32
IMP4-205ENST00000452955 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
IMP4-205ENST00000452955 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
IMP4-205ENST00000452955 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
IMP4-205ENST00000452955 CSB-PGBD3P0DP91 1061 aa17.06■□□□□ 0.32
IMP4-205ENST00000452955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.06■□□□□ 0.32
IMP4-205ENST00000452955 CAMTA1Q9Y6Y1 1673 aa17.06■□□□□ 0.32
IMP4-205ENST00000452955 TRPM1Q7Z4N2 1603 aa17.06■□□□□ 0.32
IMP4-205ENST00000452955 TONSLQ96HA7 1378 aa17.05■□□□□ 0.32
IMP4-205ENST00000452955 USP19O94966 1318 aa17.05■□□□□ 0.32
IMP4-205ENST00000452955 TTC21BQ7Z4L5 1316 aa17.05■□□□□ 0.32
IMP4-205ENST00000452955 BARGINQ6ZT62 677 aa17.05■□□□□ 0.32
IMP4-205ENST00000452955 USP6P35125 1406 aa17.04■□□□□ 0.32
IMP4-205ENST00000452955 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
IMP4-205ENST00000452955 BRD4O60885 1362 aaPredicted RBP17.02■□□□□ 0.32
IMP4-205ENST00000452955 CPDO75976 1380 aa17.02■□□□□ 0.32
IMP4-205ENST00000452955 THRAP3Q9Y2W1 955 aaKnown RBP17.02■□□□□ 0.32
IMP4-205ENST00000452955 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
IMP4-205ENST00000452955 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.31
IMP4-205ENST00000452955 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
IMP4-205ENST00000452955 AXIN2Q9Y2T1 843 aa17.01■□□□□ 0.31
IMP4-205ENST00000452955 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
IMP4-205ENST00000452955 THSD7AQ9UPZ6 1657 aa17■□□□□ 0.31
IMP4-205ENST00000452955 EP400Q96L91 3159 aa16.99■□□□□ 0.31
IMP4-205ENST00000452955 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
IMP4-205ENST00000452955 DDB1Q16531 1140 aa16.99■□□□□ 0.31
IMP4-205ENST00000452955 HDGFL2Q7Z4V5 671 aaPredicted RBP16.99■□□□□ 0.31
IMP4-205ENST00000452955 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
IMP4-205ENST00000452955 CAMKK2Q96RR4 588 aa16.98■□□□□ 0.31
IMP4-205ENST00000452955 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
IMP4-205ENST00000452955 CRB1P82279 1406 aa16.97■□□□□ 0.31
IMP4-205ENST00000452955 NBPF14Q5TI25 921 aa16.97■□□□□ 0.31
IMP4-205ENST00000452955 ARHGEF25Q86VW2 580 aa16.97■□□□□ 0.31
IMP4-205ENST00000452955 AATKQ6ZMQ8 1374 aa16.97■□□□□ 0.31
IMP4-205ENST00000452955 COL5A2P05997 1499 aaPredicted RBP16.97■□□□□ 0.31
IMP4-205ENST00000452955 NME9Q86XW9 330 aa16.96■□□□□ 0.31
IMP4-205ENST00000452955 RGPD5Q99666 1765 aa16.94■□□□□ 0.3
IMP4-205ENST00000452955 LMO7Q8WWI1 1683 aa16.94■□□□□ 0.3
IMP4-205ENST00000452955 EXOC5O00471 708 aa16.94■□□□□ 0.3
IMP4-205ENST00000452955 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
IMP4-205ENST00000452955 WDR17Q8IZU2 1322 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms