RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 BAG6P46379 1132 aa17.18■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 ABCA3Q99758 1704 aa17.16■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 CCDC61Q9Y6R9 512 aa17.16■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 ITSN1Q15811 1721 aa17.15■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 TRPM3Q9HCF6 1732 aaPredicted RBP17.14■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 EVA1CP58658 441 aa17.14■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 SRPK2P78362 688 aaKnown RBP17.14■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 ATP7BP35670 1465 aa17.13■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 STRN4Q9NRL3 753 aa17.13■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 ACEP12821 1306 aa17.13■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 EP400Q96L91 3159 aa17.13■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 ALS2Q96Q42 1657 aa17.13■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 NBPF8Q3BBV2 869 aa17.12■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 ABTB2Q8N961 1025 aa17.12■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 ARHGEF28Q8N1W1 1705 aaKnown RBP17.12■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 CHRNA2Q15822 529 aa17.11■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 KIAA0232Q92628 1395 aa17.11■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 PLEKHG3A1L390 1219 aa17.09■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
CHKB-CPT1B-201ENST00000452668 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 NBPF1Q3BBV0 1214 aa17.08■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 SPATA31A1Q5TZJ5 1347 aa17.07■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 FAM182BQ5T319 152 aa17.05■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 CABP2Q9NPB3 220 aa17.05■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 EN1Q05925 392 aaPredicted RBP17.04■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 EVC2Q86UK5 1308 aa17.02■□□□□ 0.32
CHKB-CPT1B-201ENST00000452668 PHRF1Q9P1Y6 1649 aaKnown RBP17.01■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 PSDA5PKW4 1024 aaPredicted RBP17.01■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 GCP02774 474 aa17.01■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 NLRP6P59044 892 aa17.01■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 BARGINQ6ZT62 677 aa17.01■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 TCP11L2Q8N4U5 519 aa17.01■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 TRIM37O94972 964 aa17■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 NEUROD1Q13562 356 aa17■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 SSH2Q76I76 1423 aa17■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 THRAP3Q9Y2W1 955 aaKnown RBP17■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 TOPAZ1Q8N9V7 1692 aa17■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 CPDO75976 1380 aa17■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 USP19O94966 1318 aa16.99■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 C11orf95C9JLR9 678 aaPredicted RBP16.99■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 APBA3O96018 575 aa16.99■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 LARP1Q6PKG0 1096 aaKnown RBP16.99■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 SRCAPQ6ZRS2 3230 aa16.98■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 THSD7AQ9UPZ6 1657 aa16.98■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 ROCK2O75116 1388 aaKnown RBP16.98■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 R3HDM1Q15032 1099 aaKnown RBP16.96■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 EZH2Q15910 746 aaKnown RBP16.96■□□□□ 0.31
CHKB-CPT1B-201ENST00000452668 QRICH2Q9H0J4 1663 aa16.95■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 NRKQ7Z2Y5 1582 aa16.95■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 PARD3Q8TEW0 1356 aa16.95■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 NBPF14Q5TI25 921 aa16.95■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 SIN3AQ96ST3 1273 aa16.95■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 USP6P35125 1406 aa16.95■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 TOM1L2Q6ZVM7 507 aa16.94■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 CAMTA1Q9Y6Y1 1673 aa16.94■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 KCNH5Q8NCM2 988 aa16.93■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 CSB-PGBD3P0DP91 1061 aa16.92■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 CRB1P82279 1406 aa16.92■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 AATKQ6ZMQ8 1374 aa16.91■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 CAMKK2Q96RR4 588 aa16.91■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 LRP5O75197 1615 aa16.9■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 DDB1Q16531 1140 aa16.9■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 COL5A2P05997 1499 aaPredicted RBP16.9■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
CHKB-CPT1B-201ENST00000452668 SOX12O15370 315 aa16.89■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 CDCA7Q9BWT1 371 aaPredicted RBP16.89■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 LMO7Q8WWI1 1683 aa16.88■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 TRPM1Q7Z4N2 1603 aa16.87■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 KTN1Q86UP2 1357 aaKnown RBP16.87■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 WDR17Q8IZU2 1322 aa16.86■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 HDGFL2Q7Z4V5 671 aaPredicted RBP16.85■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms