RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 RUFY2Q8WXA3 655 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 FAM107BQ9H098 131 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 UHRF1BP1LA0JNW5 1464 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 CEBPAP49715 358 aaPredicted RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 AKAP17AQ02040 695 aaKnown RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 TATP17735 454 aaPredicted RBP4.36□□□□□ -1.71
ATM-203ENST00000452508 KDM6BO15054 1643 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 NCOA1Q15788 1441 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 CCDC47Q96A33 483 aaKnown RBP4.36□□□□□ -1.71
ATM-203ENST00000452508 TULP1O00294 542 aaPredicted RBP4.36□□□□□ -1.71
ATM-203ENST00000452508 BRMS1Q9HCU9 246 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 SHANK2Q9UPX8 1470 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 KDM5CP41229 1560 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 ERICH2A1L162 156 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 PLEKHO1Q53GL0 409 aaPredicted RBP4.36□□□□□ -1.71
ATM-203ENST00000452508 TNRQ92752 1358 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 PANK3Q9H999 370 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 MARCH6O60337 910 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 FBXO31Q5XUX0 539 aaPredicted RBP4.36□□□□□ -1.71
ATM-203ENST00000452508 PLCD3Q8N3E9 789 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 GAS2L2Q8NHY3 880 aa4.36□□□□□ -1.71
ATM-203ENST00000452508 SUPT16HQ9Y5B9 1047 aaKnown RBP4.36□□□□□ -1.71
ATM-203ENST00000452508 RASSF8Q8NHQ8 419 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 C9orf78Q9NZ63 289 aaPredicted RBP4.35□□□□□ -1.71
ATM-203ENST00000452508 NLRP2Q9NX02 1062 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 TMOD2Q9NZR1 351 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 XBP1P17861 261 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 ESCO1Q5FWF5 840 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 VPS53Q5VIR6 699 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 R3HCC1Q9Y3T6 440 aaKnown RBP4.35□□□□□ -1.71
ATM-203ENST00000452508 KIF1BO60333 1816 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 CCDC146Q8IYE0 955 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 PRDM11Q9NQV5 511 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 HSP90AA2PQ14568 343 aaPredicted RBP4.35□□□□□ -1.71
ATM-203ENST00000452508 TEX35Q5T0J7 233 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 NSD2O96028 1365 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 YEATS2Q9ULM3 1422 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 CABP2Q9NPB3 220 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 MAST1Q9Y2H9 1570 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 CAVIN2O95810 425 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 SLF2Q8IX21 1173 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 KAT6BQ8WYB5 2073 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 HSCBQ8IWL3 235 aa4.35□□□□□ -1.71
ATM-203ENST00000452508 ERC2O15083 957 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 FANCIQ9NVI1 1328 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 ATP10AO60312 1499 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 ZMYM3Q14202 1370 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 CT47B1P0C2W7 299 aaPredicted RBP4.34□□□□□ -1.71
ATM-203ENST00000452508 HECW2Q9P2P5 1572 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 POLD1P28340 1107 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 CDCA7Q9BWT1 371 aaPredicted RBP4.34□□□□□ -1.71
ATM-203ENST00000452508 DIAPH1O60610 1272 aaKnown RBP4.34□□□□□ -1.71
ATM-203ENST00000452508 GBP2P32456 591 aaPredicted RBP4.34□□□□□ -1.71
ATM-203ENST00000452508 ZNF428Q96B54 188 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 MYO6Q9UM54 1294 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 NSD3Q9BZ95 1437 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 A6NNZ2 444 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 TUBB8Q3ZCM7 444 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 TSPOAP1O95153 1857 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 KDM5BQ9UGL1 1544 aa4.34□□□□□ -1.71
ATM-203ENST00000452508 KIF2AO00139 706 aaPredicted RBP4.34□□□□□ -1.71
ATM-203ENST00000452508 TEX13AQ9BXU3 409 aaPredicted RBP4.34□□□□□ -1.71
ATM-203ENST00000452508 SART3Q15020 963 aaKnown RBP4.34□□□□□ -1.72
ATM-203ENST00000452508 MYBBP1AQ9BQG0 1328 aaKnown RBP4.34□□□□□ -1.72
ATM-203ENST00000452508 DCTN1Q14203 1278 aa4.34□□□□□ -1.72
ATM-203ENST00000452508 STARD3NLO95772 234 aa4.34□□□□□ -1.72
ATM-203ENST00000452508 RNF20Q5VTR2 975 aa4.34□□□□□ -1.72
ATM-203ENST00000452508 MAPKBP1O60336 1514 aa4.34□□□□□ -1.72
ATM-203ENST00000452508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.34□□□□□ -1.72
ATM-203ENST00000452508 TRDNQ13061 729 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 TOM1L2Q6ZVM7 507 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 TBC1D2BQ9UPU7 963 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 NPHP3Q7Z494 1330 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 SSFA2P28290 1259 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 GNAI1P63096 354 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 SLC26A8Q96RN1 970 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 FEZ1Q99689 392 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 HIP1O00291 1037 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 ZPR1O75312 459 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 AMOTQ4VCS5 1084 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 ANKRD20A12PQ8NF67 263 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 ERCC4Q92889 916 aaPredicted RBP4.33□□□□□ -1.72
ATM-203ENST00000452508 PRAM1Q96QH2 718 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 ADGRF5Q8IZF2 1346 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 TRIM29Q14134 588 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 PLXNC1O60486 1568 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 LMTK3Q96Q04 1460 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 ATP7AQ04656 1500 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 LETM1O95202 739 aaPredicted RBP4.33□□□□□ -1.72
ATM-203ENST00000452508 ERC1Q8IUD2 1116 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 FRAT1Q92837 279 aaPredicted RBP4.33□□□□□ -1.72
ATM-203ENST00000452508 HSP90AB3PQ58FF7 597 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.33□□□□□ -1.72
ATM-203ENST00000452508 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.33□□□□□ -1.721e-6■■■■□ 21.9
ATM-203ENST00000452508 PRKRIP1Q9H875 184 aaPredicted RBP4.33□□□□□ -1.72
ATM-203ENST00000452508 TSR1Q2NL82 804 aaKnown RBP4.33□□□□□ -1.72
ATM-203ENST00000452508 ABTB2Q8N961 1025 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 DEF6Q9H4E7 631 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 NUTM2GQ5VZR2 741 aa4.33□□□□□ -1.72
ATM-203ENST00000452508 HOOK2Q96ED9 719 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms